RNA–Protein interactions for RNA: ENST00000382515.6

CD9-202, Transcript of CD9 molecule, humanhuman

TSL 5 BASIC

Gene CD9, Length 1,229 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-202ENST00000382515 NUP62P37198 522 aaPredicted RBP13.39□□□□□ -0.27
CD9-202ENST00000382515 ARL16Q0P5N6 197 aa13.39□□□□□ -0.27
CD9-202ENST00000382515 VWC2Q2TAL6 325 aa13.39□□□□□ -0.27
CD9-202ENST00000382515 ADAMTSL5Q6ZMM2 481 aa13.39□□□□□ -0.27
CD9-202ENST00000382515 S100A7AQ86SG5 101 aa13.39□□□□□ -0.27
CD9-202ENST00000382515 ZNF414Q96IQ9 312 aa13.39□□□□□ -0.27
CD9-202ENST00000382515 UQCC1Q9NVA1 299 aa13.39□□□□□ -0.27
CD9-202ENST00000382515 IGKV1OR2-108A0A075B7D4 117 aa13.38□□□□□ -0.27
CD9-202ENST00000382515 WI2-2373I1.2A0A1W2PRP0 233 aa13.38□□□□□ -0.27
CD9-202ENST00000382515 IGSF23A1L1A6 192 aa13.38□□□□□ -0.27
CD9-202ENST00000382515 MPDU1O75352 247 aa13.38□□□□□ -0.27
CD9-202ENST00000382515 EWSR1Q01844 656 aaKnown RBP eCLIP13.38□□□□□ -0.27
CD9-202ENST00000382515 Q6ZNX1 250 aa13.38□□□□□ -0.27
CD9-202ENST00000382515 HAPLN4Q86UW8 402 aa13.38□□□□□ -0.27
CD9-202ENST00000382515 LILRB2Q8N423 598 aa13.38□□□□□ -0.27
CD9-202ENST00000382515 TMEM217Q8N7C4 229 aa13.38□□□□□ -0.27
CD9-202ENST00000382515 BPIFCQ8NFQ6 507 aa13.38□□□□□ -0.27
CD9-202ENST00000382515 CHAC2Q8WUX2 184 aa13.38□□□□□ -0.27
CD9-202ENST00000382515 WDR89Q96FK6 387 aaPredicted RBP13.38□□□□□ -0.27
CD9-202ENST00000382515 TMEM147Q9BVK8 224 aa13.38□□□□□ -0.27
CD9-202ENST00000382515 SLC45A2Q9UMX9 530 aa13.38□□□□□ -0.27
CD9-202ENST00000382515 ZNF256Q9Y2P7 627 aaPredicted RBP13.38□□□□□ -0.27
CD9-202ENST00000382515 LSM4Q9Y4Z0 139 aaKnown RBP13.38□□□□□ -0.27
CD9-202ENST00000382515 CCNKO75909 580 aa13.37□□□□□ -0.27
CD9-202ENST00000382515 IL4P05112 153 aa13.37□□□□□ -0.27
CD9-202ENST00000382515 RPL12P30050 165 aaKnown RBP13.37□□□□□ -0.27
CD9-202ENST00000382515 ZNF90Q03938 601 aa13.37□□□□□ -0.27
CD9-202ENST00000382515 PXDC1Q5TGL8 231 aa13.37□□□□□ -0.27
CD9-202ENST00000382515 RBPMS2Q6ZRY4 209 aaKnown RBP13.37□□□□□ -0.27
CD9-202ENST00000382515 RNF125Q96EQ8 232 aa13.37□□□□□ -0.27
CD9-202ENST00000382515 GRAMD2BQ96HH9 432 aa13.37□□□□□ -0.27
CD9-202ENST00000382515 RHPN1-AS1Q9BWJ2 59 aa13.37□□□□□ -0.27
CD9-202ENST00000382515 VSIRQ9H7M9 311 aa13.37□□□□□ -0.27
CD9-202ENST00000382515 MBD2Q9UBB5 411 aa13.37□□□□□ -0.27
CD9-202ENST00000382515 RABAC1Q9UI14 185 aa13.37□□□□□ -0.27
CD9-202ENST00000382515 RNF24Q9Y225 148 aa13.37□□□□□ -0.27
CD9-202ENST00000382515 CHEK1O14757 476 aa13.36□□□□□ -0.27
CD9-202ENST00000382515 HNRNPCP07910 306 aaKnown RBP eCLIP13.36□□□□□ -0.27
CD9-202ENST00000382515 NHLH2Q02577 135 aa13.36□□□□□ -0.27
CD9-202ENST00000382515 CD300EQ496F6 205 aaPredicted RBP13.36□□□□□ -0.27
CD9-202ENST00000382515 CYP2G1PQ6ZSU1 146 aa13.36□□□□□ -0.27
CD9-202ENST00000382515 WDR83OSQ9Y284 106 aa13.36□□□□□ -0.27
CD9-202ENST00000382515 U3KQE9 123 aa13.36□□□□□ -0.27
CD9-202ENST00000382515 NOTCH1P46531 2555 aa13.36□□□□□ -0.27
CD9-202ENST00000382515 DFFBO76075 338 aa13.35□□□□□ -0.27
CD9-202ENST00000382515 EIF2B2P49770 351 aaKnown RBP13.35□□□□□ -0.27
CD9-202ENST00000382515 AP2S1P53680 142 aaPredicted RBP13.35□□□□□ -0.27
CD9-202ENST00000382515 PLP1P60201 277 aa13.35□□□□□ -0.27
CD9-202ENST00000382515 KRTAP10-11P60412 298 aa13.35□□□□□ -0.27
CD9-202ENST00000382515 ZNF546Q86UE3 836 aa13.35□□□□□ -0.27
CD9-202ENST00000382515 OR5C1Q8NGR4 320 aa13.35□□□□□ -0.27
CD9-202ENST00000382515 OR2T35Q8NGX2 323 aa13.35□□□□□ -0.27
CD9-202ENST00000382515 MLXQ9UH92 298 aa13.35□□□□□ -0.27
CD9-202ENST00000382515 TSPAN4O14817 238 aa13.34□□□□□ -0.27
CD9-202ENST00000382515 ZNF207O43670 478 aaKnown RBP13.34□□□□□ -0.27
CD9-202ENST00000382515 PAFAH1B2P68402 229 aa13.34□□□□□ -0.27
CD9-202ENST00000382515 C1orf194Q5T5A4 169 aa13.34□□□□□ -0.27
CD9-202ENST00000382515 INO80EQ8NBZ0 244 aaPredicted RBP13.34□□□□□ -0.27
CD9-202ENST00000382515 SPAG8Q99932 426 aaPredicted RBP13.34□□□□□ -0.27
CD9-202ENST00000382515 HSPB11Q9Y547 144 aa13.34□□□□□ -0.27
CD9-202ENST00000382515 IGHV3OR16-8A0A075B7F1 116 aa13.33□□□□□ -0.28
CD9-202ENST00000382515 AGPAT2O15120 278 aa13.33□□□□□ -0.28
CD9-202ENST00000382515 GP9P14770 177 aa13.33□□□□□ -0.28
CD9-202ENST00000382515 CAMLGP49069 296 aa13.33□□□□□ -0.28
CD9-202ENST00000382515 CMC4P56277 68 aaPredicted RBP13.33□□□□□ -0.28
CD9-202ENST00000382515 USF2Q15853 346 aaPredicted RBP13.33□□□□□ -0.28
CD9-202ENST00000382515 BTNL8Q6UX41 500 aa13.33□□□□□ -0.28
CD9-202ENST00000382515 AQP10Q96PS8 301 aa13.33□□□□□ -0.28
CD9-202ENST00000382515 HELTA6NFD8 242 aa13.32□□□□□ -0.28
CD9-202ENST00000382515 ZNF785A8K8V0 405 aa13.32□□□□□ -0.28
CD9-202ENST00000382515 BUB3O43684 328 aa13.32□□□□□ -0.28
CD9-202ENST00000382515 RPL29P47914 159 aaKnown RBP13.32□□□□□ -0.28
CD9-202ENST00000382515 DEFA6Q01524 100 aa13.32□□□□□ -0.28
CD9-202ENST00000382515 OR2F1Q13607 317 aa13.32□□□□□ -0.28
CD9-202ENST00000382515 Q6ZRG5 221 aa13.32□□□□□ -0.28
CD9-202ENST00000382515 NEURL2Q9BR09 285 aa13.32□□□□□ -0.28
CD9-202ENST00000382515 PBDC1Q9BVG4 233 aa13.32□□□□□ -0.28
CD9-202ENST00000382515 FBXL17Q9UF56 701 aa13.32□□□□□ -0.28
CD9-202ENST00000382515 ELOA3CA0A087WX78 387 aaPredicted RBP13.31□□□□□ -0.28
CD9-202ENST00000382515 TRAV2A0A0B4J234 112 aa13.31□□□□□ -0.28
CD9-202ENST00000382515 HYPMO75409 117 aa13.31□□□□□ -0.28
CD9-202ENST00000382515 IFNA5P01569 189 aa13.31□□□□□ -0.28
CD9-202ENST00000382515 LYZP61626 148 aa13.31□□□□□ -0.28
CD9-202ENST00000382515 FAM90A2PQ658T7 463 aa13.31□□□□□ -0.28
CD9-202ENST00000382515 GTSCR1Q86UQ5 136 aa13.31□□□□□ -0.28
CD9-202ENST00000382515 TMEM61Q8N0U2 210 aa13.31□□□□□ -0.28
CD9-202ENST00000382515 ST8SIA2Q92186 375 aa13.31□□□□□ -0.28
CD9-202ENST00000382515 RNF2Q99496 336 aa13.31□□□□□ -0.28
CD9-202ENST00000382515 ATP5SQ99766 215 aa13.31□□□□□ -0.28
CD9-202ENST00000382515 PARD6GQ9BYG4 376 aaPredicted RBP13.31□□□□□ -0.28
CD9-202ENST00000382515 KCNIP2Q9NS61 270 aa13.31□□□□□ -0.28
CD9-202ENST00000382515 AURKAIP1Q9NWT8 199 aaPredicted RBP13.31□□□□□ -0.28
CD9-202ENST00000382515 LINC00869P0C866 280 aa13.3□□□□□ -0.28
CD9-202ENST00000382515 ORM2P19652 201 aa13.3□□□□□ -0.28
CD9-202ENST00000382515 EDN2P20800 178 aa13.3□□□□□ -0.28
CD9-202ENST00000382515 C16orf54Q6UWD8 224 aa13.3□□□□□ -0.28
CD9-202ENST00000382515 ZNF709Q8N972 641 aa13.3□□□□□ -0.28
CD9-202ENST00000382515 MGST2Q99735 147 aa13.3□□□□□ -0.28
CD9-202ENST00000382515 FAM110AQ9BQ89 295 aa13.3□□□□□ -0.28
CD9-202ENST00000382515 OR4C46A6NHA9 309 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms