RNA–Protein interactions for RNA: ENST00000381990.6

GPNMB-202, Transcript of glycoprotein nmb, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GPNMB, Length 2,763 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-202ENST00000381990 MAJINQ3KP22 176 aa7.23□□□□□ -1.25
GPNMB-202ENST00000381990 FAM216BQ8N7L0 139 aa7.23□□□□□ -1.25
GPNMB-202ENST00000381990 OR1L8Q8NGR8 309 aa7.23□□□□□ -1.25
GPNMB-202ENST00000381990 LINC01560Q8TB33 94 aa7.23□□□□□ -1.25
GPNMB-202ENST00000381990 CACNG8Q8WXS5 425 aa7.23□□□□□ -1.25
GPNMB-202ENST00000381990 CHCHD1Q96BP2 118 aaKnown RBP7.23□□□□□ -1.25
GPNMB-202ENST00000381990 AMMECR1Q9Y4X0 333 aaPredicted RBP7.23□□□□□ -1.25
GPNMB-202ENST00000381990 SOX21Q9Y651 276 aaPredicted RBP7.23□□□□□ -1.25
GPNMB-202ENST00000381990 ARFGEF3Q5TH69 2177 aa7.22□□□□□ -1.25
GPNMB-202ENST00000381990 IGKV1OR2-108A0A075B7D4 117 aa7.22□□□□□ -1.25
GPNMB-202ENST00000381990 B9A039 149 aa7.22□□□□□ -1.25
GPNMB-202ENST00000381990 TMEM178BH3BS89 294 aa7.22□□□□□ -1.25
GPNMB-202ENST00000381990 UBE2L3P68036 154 aaKnown RBP7.22□□□□□ -1.25
GPNMB-202ENST00000381990 RNASEKQ6P5S7 137 aaKnown RBP7.22□□□□□ -1.25
GPNMB-202ENST00000381990 C12orf54Q6X4T0 127 aa7.22□□□□□ -1.25
GPNMB-202ENST00000381990 ZNF714Q96N38 554 aa7.22□□□□□ -1.25
GPNMB-202ENST00000381990 ZNF355PQ9NSJ1 428 aa7.22□□□□□ -1.25
GPNMB-202ENST00000381990 PPIAL4EA0A075B759 164 aa7.22□□□□□ -1.25
GPNMB-202ENST00000381990 PPIAL4DF5H284 164 aa7.22□□□□□ -1.25
GPNMB-202ENST00000381990 CA1P00915 261 aaPredicted RBP7.22□□□□□ -1.25
GPNMB-202ENST00000381990 PPIAL4FP0DN26 164 aa7.22□□□□□ -1.25
GPNMB-202ENST00000381990 GRNP28799 593 aaKnown RBP7.22□□□□□ -1.25
GPNMB-202ENST00000381990 TMEM30BQ3MIR4 351 aa7.22□□□□□ -1.25
GPNMB-202ENST00000381990 LINC00574Q9H8X3 128 aa7.22□□□□□ -1.25
GPNMB-202ENST00000381990 COL6A6A6NMZ7 2263 aa7.22□□□□□ -1.25
GPNMB-202ENST00000381990 CACNA1AO00555 2505 aa7.22□□□□□ -1.25
GPNMB-202ENST00000381990 ADGRG4Q8IZF6 3080 aa7.22□□□□□ -1.25
GPNMB-202ENST00000381990 A0A1B0GXF2 115 aa7.21□□□□□ -1.25
GPNMB-202ENST00000381990 HLA-DRB1P01911 266 aa7.21□□□□□ -1.25
GPNMB-202ENST00000381990 SAA2P0DJI9 122 aaPredicted RBP7.21□□□□□ -1.25
GPNMB-202ENST00000381990 LY6DQ14210 128 aa7.21□□□□□ -1.25
GPNMB-202ENST00000381990 VAMP3Q15836 100 aa7.21□□□□□ -1.25
GPNMB-202ENST00000381990 SMIM15Q7Z3B0 74 aa7.21□□□□□ -1.25
GPNMB-202ENST00000381990 FAM168AQ92567 244 aa7.21□□□□□ -1.25
GPNMB-202ENST00000381990 FAM167A-AS1Q96KT0 104 aa7.21□□□□□ -1.25
GPNMB-202ENST00000381990 NBEAQ8NFP9 2946 aa7.21□□□□□ -1.26
GPNMB-202ENST00000381990 hADV38S2A0JD32 116 aa7.21□□□□□ -1.26
GPNMB-202ENST00000381990 PSMB11A5LHX3 300 aa7.21□□□□□ -1.26
GPNMB-202ENST00000381990 OR4C46A6NHA9 309 aa7.21□□□□□ -1.26
GPNMB-202ENST00000381990 HIGD1CA8MV81 97 aa7.21□□□□□ -1.26
GPNMB-202ENST00000381990 PEX7O00628 323 aa7.21□□□□□ -1.26
GPNMB-202ENST00000381990 TOX4O94842 621 aa7.21□□□□□ -1.26
GPNMB-202ENST00000381990 OR5AL1P0C617 328 aa7.21□□□□□ -1.26
GPNMB-202ENST00000381990 RPL8P62917 257 aaKnown RBP7.21□□□□□ -1.26
GPNMB-202ENST00000381990 CD69Q07108 199 aa7.21□□□□□ -1.26
GPNMB-202ENST00000381990 CT83Q5H943 113 aa7.21□□□□□ -1.26
GPNMB-202ENST00000381990 NHLRC2Q8NBF2 726 aa7.21□□□□□ -1.26
GPNMB-202ENST00000381990 NUDT10Q8NFP7 164 aa7.21□□□□□ -1.26
GPNMB-202ENST00000381990 OR1L4Q8NGR5 311 aa7.21□□□□□ -1.26
GPNMB-202ENST00000381990 CCL17Q92583 94 aa7.21□□□□□ -1.26
GPNMB-202ENST00000381990 NUDT11Q96G61 164 aa7.21□□□□□ -1.26
GPNMB-202ENST00000381990 SSBP3Q9BWW4 388 aaPredicted RBP7.21□□□□□ -1.26
GPNMB-202ENST00000381990 HINT2Q9BX68 163 aa7.21□□□□□ -1.26
GPNMB-202ENST00000381990 SLC25A2Q9BXI2 301 aa7.21□□□□□ -1.26
GPNMB-202ENST00000381990 HSBP1L1C9JCN9 74 aa7.2□□□□□ -1.26
GPNMB-202ENST00000381990 UPK2O00526 184 aa7.2□□□□□ -1.26
GPNMB-202ENST00000381990 PLAUP00749 431 aa7.2□□□□□ -1.26
GPNMB-202ENST00000381990 HBBP68871 147 aa7.2□□□□□ -1.26
GPNMB-202ENST00000381990 MEF2CQ06413 473 aaPredicted RBP7.2□□□□□ -1.26
GPNMB-202ENST00000381990 CDSNQ15517 529 aa7.2□□□□□ -1.26
GPNMB-202ENST00000381990 GDF5OSQ5U4N7 250 aa7.2□□□□□ -1.26
GPNMB-202ENST00000381990 DEFB125Q8N687 156 aa7.2□□□□□ -1.26
GPNMB-202ENST00000381990 LINC00312Q9Y6C7 94 aa7.2□□□□□ -1.26
GPNMB-202ENST00000381990 TPRP12270 2363 aaKnown RBP7.2□□□□□ -1.26
GPNMB-202ENST00000381990 INS-IGF2F8WCM5 200 aa7.2□□□□□ -1.26
GPNMB-202ENST00000381990 BPIFB3P59826 476 aa7.2□□□□□ -1.26
GPNMB-202ENST00000381990 CT45A1Q5HYN5 189 aa7.2□□□□□ -1.26
GPNMB-202ENST00000381990 SLC25A34Q6PIV7 304 aa7.2□□□□□ -1.26
GPNMB-202ENST00000381990 PET117Q6UWS5 81 aa7.2□□□□□ -1.26
GPNMB-202ENST00000381990 STXBP6Q8NFX7 210 aa7.2□□□□□ -1.26
GPNMB-202ENST00000381990 CT45A3Q8NHU0 189 aa7.2□□□□□ -1.26
GPNMB-202ENST00000381990 TMEM191AQ9H0A3 160 aa7.2□□□□□ -1.26
GPNMB-202ENST00000381990 SYS1-DBNDD2H3BUS1 97 aa7.2□□□□□ -1.26
GPNMB-202ENST00000381990 TNFRSF13BO14836 293 aaPredicted RBP7.2□□□□□ -1.26
GPNMB-202ENST00000381990 IGHV3-7P01780 117 aa7.2□□□□□ -1.26
GPNMB-202ENST00000381990 C1orf229Q6ZS94 237 aaPredicted RBP7.2□□□□□ -1.26
GPNMB-202ENST00000381990 Q6ZVH6 145 aa7.2□□□□□ -1.26
GPNMB-202ENST00000381990 ZNF329Q86UD4 541 aa7.2□□□□□ -1.26
GPNMB-202ENST00000381990 PAXXQ9BUH6 204 aa7.2□□□□□ -1.26
GPNMB-202ENST00000381990 MS4A6AQ9H2W1 248 aa7.2□□□□□ -1.26
GPNMB-202ENST00000381990 LEPROTL1O95214 131 aa7.19□□□□□ -1.26
GPNMB-202ENST00000381990 RNASE2P10153 161 aaKnown RBP7.19□□□□□ -1.26
GPNMB-202ENST00000381990 GATA2P23769 480 aaPredicted RBP7.19□□□□□ -1.26
GPNMB-202ENST00000381990 ZNF672Q499Z4 452 aaPredicted RBP7.19□□□□□ -1.26
GPNMB-202ENST00000381990 MPV17L2Q567V2 206 aa7.19□□□□□ -1.26
GPNMB-202ENST00000381990 FAM120AOSQ5T036 256 aa7.19□□□□□ -1.26
GPNMB-202ENST00000381990 OR9G1Q8NH87 305 aa7.19□□□□□ -1.26
GPNMB-202ENST00000381990 OR2T6Q8NHC8 308 aa7.19□□□□□ -1.26
GPNMB-202ENST00000381990 LEAP2Q969E1 77 aa7.19□□□□□ -1.26
GPNMB-202ENST00000381990 GFRA4Q9GZZ7 299 aa7.19□□□□□ -1.26
GPNMB-202ENST00000381990 C7orf69Q9H7B7 122 aa7.19□□□□□ -1.26
GPNMB-202ENST00000381990 RPUSD1Q9UJJ7 312 aaKnown RBP7.19□□□□□ -1.26
GPNMB-202ENST00000381990 ABCA4P78363 2273 aa7.19□□□□□ -1.26
GPNMB-202ENST00000381990 TEX50A0A1B0GTY4 177 aa7.19□□□□□ -1.26
GPNMB-202ENST00000381990 FAM231BA6NCW3 169 aa7.19□□□□□ -1.26
GPNMB-202ENST00000381990 A8MWL6 223 aa7.19□□□□□ -1.26
GPNMB-202ENST00000381990 TAX1BP3O14907 124 aa7.19□□□□□ -1.26
GPNMB-202ENST00000381990 COX7A2P2O60397 106 aa7.19□□□□□ -1.26
GPNMB-202ENST00000381990 LIPFP07098 398 aa7.19□□□□□ -1.26
GPNMB-202ENST00000381990 LOXP28300 417 aaPredicted RBP7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms