RNA–Protein interactions for RNA: ENST00000381150.5

SDC1-202, Transcript of syndecan 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SDC1, Length 3,291 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC1-202ENST00000381150 OR1B1Q8NGR6 318 aa11.26□□□□□ -0.61
SDC1-202ENST00000381150 A0A1W2PRD5 423 aa11.25□□□□□ -0.61
SDC1-202ENST00000381150 A0A1W2PRF3 423 aa11.25□□□□□ -0.61
SDC1-202ENST00000381150 A0A1W2PRM7 423 aa11.25□□□□□ -0.61
SDC1-202ENST00000381150 IGLV1-44P01699 117 aa11.25□□□□□ -0.61
SDC1-202ENST00000381150 P01737 135 aa11.25□□□□□ -0.61
SDC1-202ENST00000381150 SSBP2P81877 361 aaPredicted RBP11.25□□□□□ -0.61
SDC1-202ENST00000381150 EIF4EBP1Q13541 118 aaPredicted RBP11.25□□□□□ -0.61
SDC1-202ENST00000381150 GRAMD2BQ96HH9 432 aa11.25□□□□□ -0.61
SDC1-202ENST00000381150 ST20Q9HBF5 79 aa11.25□□□□□ -0.61
SDC1-202ENST00000381150 PRR33A8MZF0 331 aa11.25□□□□□ -0.61
SDC1-202ENST00000381150 OR5AL1P0C617 328 aa11.25□□□□□ -0.61
SDC1-202ENST00000381150 HBBP68871 147 aa11.25□□□□□ -0.61
SDC1-202ENST00000381150 OR1N2Q8NGR9 330 aa11.25□□□□□ -0.61
SDC1-202ENST00000381150 SLC25A33Q9BSK2 321 aa11.25□□□□□ -0.61
SDC1-202ENST00000381150 TRAV8-1A0A0A6YYK1 113 aa11.24□□□□□ -0.61
SDC1-202ENST00000381150 SERTM2A0A1B0GWG4 89 aa11.24□□□□□ -0.61
SDC1-202ENST00000381150 VWC2LB2RUY7 222 aa11.24□□□□□ -0.61
SDC1-202ENST00000381150 PRSS46E5RG02 174 aa11.24□□□□□ -0.61
SDC1-202ENST00000381150 MOSP00540 346 aa11.24□□□□□ -0.61
SDC1-202ENST00000381150 IGKV1-16P04430 117 aa11.24□□□□□ -0.61
SDC1-202ENST00000381150 SEM1Q6ZVN7 128 aa11.24□□□□□ -0.61
SDC1-202ENST00000381150 NPIPB3Q92617 1050 aa11.24□□□□□ -0.61
SDC1-202ENST00000381150 TMUB1Q9BVT8 246 aa11.24□□□□□ -0.61
SDC1-202ENST00000381150 ZNF207O43670 478 aaKnown RBP11.24□□□□□ -0.61
SDC1-202ENST00000381150 CECR9P0C854 216 aa11.24□□□□□ -0.61
SDC1-202ENST00000381150 SAA2P0DJI9 122 aaPredicted RBP11.24□□□□□ -0.61
SDC1-202ENST00000381150 PRSS3P2Q8NHM4 247 aa11.24□□□□□ -0.61
SDC1-202ENST00000381150 SMIM12Q96EX1 92 aa11.24□□□□□ -0.61
SDC1-202ENST00000381150 COMMD5Q9GZQ3 224 aa11.24□□□□□ -0.61
SDC1-202ENST00000381150 HLA-DRB1P01911 266 aa11.24□□□□□ -0.61
SDC1-202ENST00000381150 NMUP48645 174 aa11.24□□□□□ -0.61
SDC1-202ENST00000381150 C10orf113Q5VZT2 155 aa11.24□□□□□ -0.61
SDC1-202ENST00000381150 PRSS57Q6UWY2 283 aa11.24□□□□□ -0.61
SDC1-202ENST00000381150 FER1L6-AS1Q8NA97 138 aa11.24□□□□□ -0.61
SDC1-202ENST00000381150 ZNF71Q9NQZ8 489 aaPredicted RBP11.24□□□□□ -0.61
SDC1-202ENST00000381150 SPRY3O43610 288 aa11.23□□□□□ -0.61
SDC1-202ENST00000381150 RTL8BQ17RB0 113 aa11.23□□□□□ -0.61
SDC1-202ENST00000381150 C10orf55Q5SWW7 151 aa11.23□□□□□ -0.61
SDC1-202ENST00000381150 COL8A1P27658 744 aa11.23□□□□□ -0.61
SDC1-202ENST00000381150 DEFB109BQ30KR1 87 aa11.23□□□□□ -0.61
SDC1-202ENST00000381150 IGF2BP2-AS1Q96M15 143 aa11.23□□□□□ -0.61
SDC1-202ENST00000381150 CXXC4Q9H2H0 198 aa11.23□□□□□ -0.61
SDC1-202ENST00000381150 IDI2-AS1Q9NZ38 188 aa11.23□□□□□ -0.61
SDC1-202ENST00000381150 THYN1Q9P016 225 aa11.23□□□□□ -0.61
SDC1-202ENST00000381150 TET2Q6N021 2002 aaPredicted RBP11.23□□□□□ -0.61
SDC1-202ENST00000381150 TMSB15BA0A087X1C1 80 aa11.22□□□□□ -0.61
SDC1-202ENST00000381150 GTF2H5Q6ZYL4 71 aa11.22□□□□□ -0.61
SDC1-202ENST00000381150 PDPNQ86YL7 162 aa11.22□□□□□ -0.61
SDC1-202ENST00000381150 URB1-AS1Q96HZ7 61 aa11.22□□□□□ -0.61
SDC1-202ENST00000381150 PLP1P60201 277 aa11.22□□□□□ -0.61
SDC1-202ENST00000381150 IFI27L2Q9H2X8 130 aa11.22□□□□□ -0.61
SDC1-202ENST00000381150 SLC25A10Q9UBX3 287 aaPredicted RBP11.22□□□□□ -0.61
SDC1-202ENST00000381150 ZNF292O60281 2723 aa11.22□□□□□ -0.61
SDC1-202ENST00000381150 IGHV1-18A0A0C4DH31 117 aa11.22□□□□□ -0.61
SDC1-202ENST00000381150 RHOGP84095 191 aa11.22□□□□□ -0.61
SDC1-202ENST00000381150 DUX4L9Q6RFH8 374 aaPredicted RBP11.22□□□□□ -0.61
SDC1-202ENST00000381150 PRR7Q8TB68 274 aa11.22□□□□□ -0.61
SDC1-202ENST00000381150 GTSF1LQ9H1H1 148 aa11.22□□□□□ -0.61
SDC1-202ENST00000381150 CALYQ9NYX4 217 aa11.22□□□□□ -0.61
SDC1-202ENST00000381150 RIF1Q5UIP0 2472 aaKnown RBP11.21□□□□□ -0.61
SDC1-202ENST00000381150 C15orf65H3BRN8 121 aa11.21□□□□□ -0.61
SDC1-202ENST00000381150 APOHP02749 345 aaPredicted RBP11.21□□□□□ -0.61
SDC1-202ENST00000381150 SMAGPQ0VAQ4 97 aa11.21□□□□□ -0.61
SDC1-202ENST00000381150 TMEM97Q5BJF2 176 aa11.21□□□□□ -0.61
SDC1-202ENST00000381150 FA2HQ7L5A8 372 aa11.21□□□□□ -0.61
SDC1-202ENST00000381150 LINC00305Q7Z4B0 112 aa11.21□□□□□ -0.61
SDC1-202ENST00000381150 MOGAT3Q86VF5 341 aa11.21□□□□□ -0.61
SDC1-202ENST00000381150 CD5LO43866 347 aa11.21□□□□□ -0.62
SDC1-202ENST00000381150 HIST1H1AQ02539 215 aaPredicted RBP11.21□□□□□ -0.62
SDC1-202ENST00000381150 CT45A1Q5HYN5 189 aa11.21□□□□□ -0.62
SDC1-202ENST00000381150 MBNL2Q5VZF2 373 aaKnown RBP11.21□□□□□ -0.62
SDC1-202ENST00000381150 HCP5Q6MZN7 132 aa11.21□□□□□ -0.62
SDC1-202ENST00000381150 LINC00322Q6ZN03 302 aaPredicted RBP11.21□□□□□ -0.62
SDC1-202ENST00000381150 CT45A3Q8NHU0 189 aa11.21□□□□□ -0.62
SDC1-202ENST00000381150 PPP1R35Q8TAP8 253 aa11.21□□□□□ -0.62
SDC1-202ENST00000381150 hADV38S2A0JD32 116 aa11.2□□□□□ -0.62
SDC1-202ENST00000381150 TMPRSS3P57727 454 aa11.2□□□□□ -0.62
SDC1-202ENST00000381150 MSMPQ1L6U9 139 aa11.2□□□□□ -0.62
SDC1-202ENST00000381150 PRNTQ86SH4 94 aa11.2□□□□□ -0.62
SDC1-202ENST00000381150 SLC25A2Q9BXI2 301 aa11.2□□□□□ -0.62
SDC1-202ENST00000381150 PTPRZ1P23471 2315 aaPredicted RBP11.2□□□□□ -0.62
SDC1-202ENST00000381150 SPTAN1Q13813 2472 aaKnown RBP11.2□□□□□ -0.62
SDC1-202ENST00000381150 MBD3L4A6NDZ8 208 aaPredicted RBP11.2□□□□□ -0.62
SDC1-202ENST00000381150 MBD3L3A6NE82 208 aaPredicted RBP11.2□□□□□ -0.62
SDC1-202ENST00000381150 MBD3L5A6NJ08 208 aaPredicted RBP11.2□□□□□ -0.62
SDC1-202ENST00000381150 SRRM4A7MD48 611 aaKnown RBP11.2□□□□□ -0.62
SDC1-202ENST00000381150 A8MWL6 223 aa11.2□□□□□ -0.62
SDC1-202ENST00000381150 K7EMI3 77 aa11.2□□□□□ -0.62
SDC1-202ENST00000381150 LIPFP07098 398 aa11.2□□□□□ -0.62
SDC1-202ENST00000381150 FAM71F2Q6NXP2 309 aa11.2□□□□□ -0.62
SDC1-202ENST00000381150 TMEM108Q6UXF1 575 aa11.2□□□□□ -0.62
SDC1-202ENST00000381150 CIARTQ8N365 385 aaPredicted RBP11.2□□□□□ -0.62
SDC1-202ENST00000381150 MBD3L2Q8NHZ7 208 aaPredicted RBP11.2□□□□□ -0.62
SDC1-202ENST00000381150 PERPQ96FX8 193 aa11.2□□□□□ -0.62
SDC1-202ENST00000381150 SLC25A15Q9Y619 301 aa11.2□□□□□ -0.62
SDC1-202ENST00000381150 IGFL3Q6UXB1 125 aa11.19□□□□□ -0.62
SDC1-202ENST00000381150 OR10AG1Q8NH19 301 aa11.19□□□□□ -0.62
SDC1-202ENST00000381150 RPP21Q9H633 154 aaKnown RBP11.19□□□□□ -0.62
SDC1-202ENST00000381150 HSPB8Q9UJY1 196 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms