RNA–Protein interactions for RNA: ENST00000381089.7

VCX3A-201, Transcript of variable charge X-linked 3A, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene VCX3A, Length 995 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3A-201ENST00000381089 IGKV1D-39P04432 117 aa11.56□□□□□ -0.56
VCX3A-201ENST00000381089 CRYBB3P26998 211 aa11.56□□□□□ -0.56
VCX3A-201ENST00000381089 OPRK1P41145 380 aa11.56□□□□□ -0.56
VCX3A-201ENST00000381089 AKR1C2P52895 323 aa11.56□□□□□ -0.56
VCX3A-201ENST00000381089 AP2S1P53680 142 aaPredicted RBP11.56□□□□□ -0.56
VCX3A-201ENST00000381089 TRIM16LQ309B1 348 aa11.56□□□□□ -0.56
VCX3A-201ENST00000381089 SPINK9Q5DT21 86 aa11.56□□□□□ -0.56
VCX3A-201ENST00000381089 NUDT15Q9NV35 164 aa11.56□□□□□ -0.56
VCX3A-201ENST00000381089 CLEC5AQ9NY25 188 aa11.56□□□□□ -0.56
VCX3A-201ENST00000381089 AGRNO00468 2067 aa11.56□□□□□ -0.56
VCX3A-201ENST00000381089 TRAV30A0A087WSZ9 112 aa11.55□□□□□ -0.56
VCX3A-201ENST00000381089 A0A1B0GVY2 172 aa11.55□□□□□ -0.56
VCX3A-201ENST00000381089 TCRBP04435 133 aa11.55□□□□□ -0.56
VCX3A-201ENST00000381089 VAMP1P23763 118 aa11.55□□□□□ -0.56
VCX3A-201ENST00000381089 HOXA1P49639 335 aaPredicted RBP11.55□□□□□ -0.56
VCX3A-201ENST00000381089 DHRS2Q13268 280 aa11.55□□□□□ -0.56
VCX3A-201ENST00000381089 NRARPQ7Z6K4 114 aa11.55□□□□□ -0.56
VCX3A-201ENST00000381089 OR4X1Q8NH49 305 aa11.55□□□□□ -0.56
VCX3A-201ENST00000381089 DCANP1Q8TF63 244 aa11.55□□□□□ -0.56
VCX3A-201ENST00000381089 SNRPD3P62318 126 aaKnown RBP11.54□□□□□ -0.56
VCX3A-201ENST00000381089 PPP1R1AQ13522 171 aa11.54□□□□□ -0.56
VCX3A-201ENST00000381089 DNAH17Q9UFH2 4485 aa11.54□□□□□ -0.56
VCX3A-201ENST00000381089 RPS10-NUDT3A0A1W2PQS6 291 aa11.53□□□□□ -0.56
VCX3A-201ENST00000381089 H2AFB2P0C5Z0 115 aa11.53□□□□□ -0.56
VCX3A-201ENST00000381089 RNASE2P10153 161 aaKnown RBP11.53□□□□□ -0.56
VCX3A-201ENST00000381089 UCP1P25874 307 aa11.53□□□□□ -0.56
VCX3A-201ENST00000381089 SUPT4H1P63272 117 aaKnown RBP11.53□□□□□ -0.56
VCX3A-201ENST00000381089 C12orf74Q32Q52 190 aa11.53□□□□□ -0.56
VCX3A-201ENST00000381089 C4orf46Q504U0 113 aa11.53□□□□□ -0.56
VCX3A-201ENST00000381089 PSMG4Q5JS54 123 aa11.53□□□□□ -0.56
VCX3A-201ENST00000381089 CSNK1G2-AS1Q8NCQ2 148 aa11.53□□□□□ -0.56
VCX3A-201ENST00000381089 RAB40CQ96S21 281 aa11.53□□□□□ -0.56
VCX3A-201ENST00000381089 TMEM222Q9H0R3 208 aa11.53□□□□□ -0.56
VCX3A-201ENST00000381089 CELA1Q9UNI1 258 aa11.53□□□□□ -0.56
VCX3A-201ENST00000381089 M0R2N4 97 aa11.52□□□□□ -0.57
VCX3A-201ENST00000381089 IFNA10P01566 189 aa11.52□□□□□ -0.57
VCX3A-201ENST00000381089 IFNA21P01568 189 aa11.52□□□□□ -0.57
VCX3A-201ENST00000381089 ANXA3P12429 323 aa11.52□□□□□ -0.57
VCX3A-201ENST00000381089 IZUMO4Q1ZYL8 232 aa11.52□□□□□ -0.57
VCX3A-201ENST00000381089 TMEM128Q5BJH2 165 aa11.52□□□□□ -0.57
VCX3A-201ENST00000381089 TMEM268Q5VZI3 342 aa11.52□□□□□ -0.57
VCX3A-201ENST00000381089 ZNF767PQ75MW2 155 aa11.52□□□□□ -0.57
VCX3A-201ENST00000381089 RNASE11Q8TAA1 199 aaKnown RBP11.52□□□□□ -0.57
VCX3A-201ENST00000381089 LHFPL5Q8TAF8 219 aa11.52□□□□□ -0.57
VCX3A-201ENST00000381089 Q8WTZ3 238 aa11.52□□□□□ -0.57
VCX3A-201ENST00000381089 GLYATL2Q8WU03 294 aa11.52□□□□□ -0.57
VCX3A-201ENST00000381089 KCNIP3Q9Y2W7 256 aa11.52□□□□□ -0.57
VCX3A-201ENST00000381089 A0A0B4J293 547 aa11.51□□□□□ -0.57
VCX3A-201ENST00000381089 B3GALNT1O75752 331 aa11.51□□□□□ -0.57
VCX3A-201ENST00000381089 SFT2D2O95562 160 aa11.51□□□□□ -0.57
VCX3A-201ENST00000381089 HNRNPCP07910 306 aaKnown RBP eCLIP11.51□□□□□ -0.57
VCX3A-201ENST00000381089 OR4E1P0C645 316 aa11.51□□□□□ -0.57
VCX3A-201ENST00000381089 DHODHQ02127 395 aa11.51□□□□□ -0.57
VCX3A-201ENST00000381089 LGALS9BQ3B8N2 356 aa11.51□□□□□ -0.57
VCX3A-201ENST00000381089 SOHLH1Q5JUK2 328 aa11.51□□□□□ -0.57
VCX3A-201ENST00000381089 UBE2DNLQ8IWF7 75 aa11.51□□□□□ -0.57
VCX3A-201ENST00000381089 RRNAD1Q96FB5 475 aaKnown RBP11.51□□□□□ -0.57
VCX3A-201ENST00000381089 DYNC1H1Q14204 4646 aaKnown RBP11.5□□□□□ -0.57
VCX3A-201ENST00000381089 DNAH11Q96DT5 4516 aa11.5□□□□□ -0.57
VCX3A-201ENST00000381089 MUC4Q99102 2169 aa11.5□□□□□ -0.57
VCX3A-201ENST00000381089 C9orf170A2RU37 121 aa11.5□□□□□ -0.57
VCX3A-201ENST00000381089 TMEM189A5PLL7 270 aa11.5□□□□□ -0.57
VCX3A-201ENST00000381089 RTL8CO15255 209 aa11.5□□□□□ -0.57
VCX3A-201ENST00000381089 IGKV1-5P01602 117 aa11.5□□□□□ -0.57
VCX3A-201ENST00000381089 SPART-AS1P0CW21 52 aa11.5□□□□□ -0.57
VCX3A-201ENST00000381089 TIGITQ495A1 244 aa11.5□□□□□ -0.57
VCX3A-201ENST00000381089 SELENOHQ8IZQ5 122 aaKnown RBP11.5□□□□□ -0.57
VCX3A-201ENST00000381089 OR1S2Q8NGQ3 325 aa11.5□□□□□ -0.57
VCX3A-201ENST00000381089 SEC22CQ9BRL7 303 aa11.5□□□□□ -0.57
VCX3A-201ENST00000381089 FNDC4Q9H6D8 234 aaPredicted RBP11.5□□□□□ -0.57
VCX3A-201ENST00000381089 SEPSECSQ9HD40 501 aaKnown RBP11.5□□□□□ -0.57
VCX3A-201ENST00000381089 XCL2Q9UBD3 114 aa11.5□□□□□ -0.57
VCX3A-201ENST00000381089 CDS2O95674 445 aa11.49□□□□□ -0.57
VCX3A-201ENST00000381089 PTTG1O95997 202 aa11.49□□□□□ -0.57
VCX3A-201ENST00000381089 IGKV1-17P01599 117 aa11.49□□□□□ -0.57
VCX3A-201ENST00000381089 P0C879 139 aa11.49□□□□□ -0.57
VCX3A-201ENST00000381089 SLC25A4P12235 298 aa11.49□□□□□ -0.57
VCX3A-201ENST00000381089 HTR2BP41595 481 aa11.49□□□□□ -0.57
VCX3A-201ENST00000381089 UBE2MP61081 183 aaKnown RBP11.49□□□□□ -0.57
VCX3A-201ENST00000381089 C16orf54Q6UWD8 224 aa11.49□□□□□ -0.57
VCX3A-201ENST00000381089 LGI3Q8N145 548 aa11.49□□□□□ -0.57
VCX3A-201ENST00000381089 RBPMSQ93062 196 aaKnown RBP11.49□□□□□ -0.57
VCX3A-201ENST00000381089 FAM210BQ96KR6 192 aa11.49□□□□□ -0.57
VCX3A-201ENST00000381089 MRPL36Q9P0J6 103 aaKnown RBP11.49□□□□□ -0.57
VCX3A-201ENST00000381089 U3KQE9 123 aa11.49□□□□□ -0.57
VCX3A-201ENST00000381089 A0A0G2JRQ6 117 aa11.48□□□□□ -0.57
VCX3A-201ENST00000381089 TEX48A0A1B0GUV7 120 aa11.48□□□□□ -0.57
VCX3A-201ENST00000381089 INMT-MINDY4F8WBC2 141 aa11.48□□□□□ -0.57
VCX3A-201ENST00000381089 SRPXP78539 464 aa11.48□□□□□ -0.57
VCX3A-201ENST00000381089 MLANAQ16655 118 aa11.48□□□□□ -0.57
VCX3A-201ENST00000381089 RGS21Q2M5E4 152 aa11.48□□□□□ -0.57
VCX3A-201ENST00000381089 LYZL2Q7Z4W2 148 aa11.48□□□□□ -0.57
VCX3A-201ENST00000381089 GLMPQ8WWB7 406 aa11.48□□□□□ -0.57
VCX3A-201ENST00000381089 NEU1Q99519 415 aa11.48□□□□□ -0.57
VCX3A-201ENST00000381089 NRN1Q9NPD7 142 aa11.48□□□□□ -0.57
VCX3A-201ENST00000381089 TMEM56-RWDD3S4R434 201 aa11.48□□□□□ -0.57
VCX3A-201ENST00000381089 SMIM9A6NGZ8 99 aa11.47□□□□□ -0.57
VCX3A-201ENST00000381089 FAM90A26D6RGX4 464 aa11.47□□□□□ -0.57
VCX3A-201ENST00000381089 H3BMM0 161 aa11.47□□□□□ -0.57
VCX3A-201ENST00000381089 OR10J1P30954 320 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms