RNA–Protein interactions for RNA: ENST00000380358.8

CHD3-203, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2 BASIC

Gene CHD3, Length 7,356 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-203ENST00000380358 PRIMA1Q86XR5 153 aa10.3□□□□□ -0.76
CHD3-203ENST00000380358 CSTL1Q9H114 145 aa10.3□□□□□ -0.76
CHD3-203ENST00000380358 SPRR3Q9UBC9 169 aa10.3□□□□□ -0.76
CHD3-203ENST00000380358 PLXNB2O15031 1838 aa10.3□□□□□ -0.76
CHD3-203ENST00000380358 IGKV1OR2-108A0A075B7D4 117 aa10.3□□□□□ -0.76
CHD3-203ENST00000380358 HOXB1P14653 301 aaPredicted RBP10.3□□□□□ -0.76
CHD3-203ENST00000380358 UCP3P55916 312 aa10.3□□□□□ -0.76
CHD3-203ENST00000380358 SP5Q6BEB4 398 aaPredicted RBP10.3□□□□□ -0.76
CHD3-203ENST00000380358 TNFRSF14Q92956 283 aa10.3□□□□□ -0.76
CHD3-203ENST00000380358 RGPD4Q7Z3J3 1758 aa10.3□□□□□ -0.76
CHD3-203ENST00000380358 THADAQ6YHU6 1953 aa10.3□□□□□ -0.76
CHD3-203ENST00000380358 DEFB131AP59861 70 aa10.3□□□□□ -0.76
CHD3-203ENST00000380358 ATP6V0BQ99437 205 aa10.3□□□□□ -0.76
CHD3-203ENST00000380358 GAGE12BA1L429 117 aa10.3□□□□□ -0.76
CHD3-203ENST00000380358 GAGE7O76087 117 aa10.3□□□□□ -0.76
CHD3-203ENST00000380358 GAGE12FP0CL80 117 aa10.3□□□□□ -0.76
CHD3-203ENST00000380358 GAGE12GP0CL81 117 aa10.3□□□□□ -0.76
CHD3-203ENST00000380358 GAGE12IP0CL82 117 aa10.3□□□□□ -0.76
CHD3-203ENST00000380358 UCP1P25874 307 aa10.3□□□□□ -0.76
CHD3-203ENST00000380358 LAGE3Q14657 143 aa10.3□□□□□ -0.76
CHD3-203ENST00000380358 IGHV4-28A0A0C4DH34 117 aa10.29□□□□□ -0.76
CHD3-203ENST00000380358 GAGE6Q13070 117 aa10.29□□□□□ -0.76
CHD3-203ENST00000380358 SAXO1Q8IYX7 474 aa10.29□□□□□ -0.76
CHD3-203ENST00000380358 TMEM256Q8N2U0 113 aa10.29□□□□□ -0.76
CHD3-203ENST00000380358 PSPNO60542 156 aa10.29□□□□□ -0.76
CHD3-203ENST00000380358 FSTP19883 344 aa10.29□□□□□ -0.76
CHD3-203ENST00000380358 KIAA2026Q5HYC2 2103 aa10.29□□□□□ -0.76
CHD3-203ENST00000380358 A0A0J9YY99 117 aa10.29□□□□□ -0.76
CHD3-203ENST00000380358 ZMAT4Q9H898 229 aa10.29□□□□□ -0.76
CHD3-203ENST00000380358 NRN1Q9NPD7 142 aa10.29□□□□□ -0.76
CHD3-203ENST00000380358 EP300Q09472 2414 aaPredicted RBP10.29□□□□□ -0.76
CHD3-203ENST00000380358 COL6A6A6NMZ7 2263 aa10.28□□□□□ -0.76
CHD3-203ENST00000380358 PLAC1Q9HBJ0 212 aa10.28□□□□□ -0.76
CHD3-203ENST00000380358 C5orf30Q96GV9 206 aa10.28□□□□□ -0.76
CHD3-203ENST00000380358 IGHV1-18A0A0C4DH31 117 aa10.28□□□□□ -0.76
CHD3-203ENST00000380358 D6R8Y8 96 aa10.28□□□□□ -0.76
CHD3-203ENST00000380358 HAMPP81172 84 aa10.28□□□□□ -0.76
CHD3-203ENST00000380358 SAMD5Q5TGI4 173 aa10.28□□□□□ -0.76
CHD3-203ENST00000380358 PMVKQ15126 192 aa10.28□□□□□ -0.76
CHD3-203ENST00000380358 SLC25A38Q96DW6 304 aa10.28□□□□□ -0.76
CHD3-203ENST00000380358 CHCHD2Q9Y6H1 151 aaPredicted RBP10.28□□□□□ -0.76
CHD3-203ENST00000380358 ZNF708P17019 499 aa10.28□□□□□ -0.76
CHD3-203ENST00000380358 PRDM13Q9H4Q3 707 aa10.28□□□□□ -0.76
CHD3-203ENST00000380358 ZNF319Q9P2F9 582 aa10.28□□□□□ -0.76
CHD3-203ENST00000380358 Q0VFX4 171 aa10.27□□□□□ -0.76
CHD3-203ENST00000380358 UPK2O00526 184 aa10.27□□□□□ -0.76
CHD3-203ENST00000380358 RASL10AQ92737 203 aa10.27□□□□□ -0.76
CHD3-203ENST00000380358 IGF2BP2-AS1Q96M15 143 aa10.27□□□□□ -0.76
CHD3-203ENST00000380358 TRBV5-5A0A0J9YX44 114 aa10.27□□□□□ -0.77
CHD3-203ENST00000380358 NMBP08949 121 aa10.27□□□□□ -0.77
CHD3-203ENST00000380358 UNQ6494/PRO21346Q6UXR6 183 aa10.27□□□□□ -0.77
CHD3-203ENST00000380358 BMPERQ8N8U9 685 aa10.27□□□□□ -0.77
CHD3-203ENST00000380358 ZNF479Q96JC4 524 aa10.27□□□□□ -0.77
CHD3-203ENST00000380358 PSG1P11464 419 aa10.27□□□□□ -0.77
CHD3-203ENST00000380358 KLF5Q13887 457 aaPredicted RBP10.27□□□□□ -0.77
CHD3-203ENST00000380358 MORN2Q502X0 79 aa10.27□□□□□ -0.77
CHD3-203ENST00000380358 PIN1P1O15428 100 aa10.26□□□□□ -0.77
CHD3-203ENST00000380358 LIMS1P48059 325 aa10.26□□□□□ -0.77
CHD3-203ENST00000380358 RNF114Q9Y508 228 aa10.26□□□□□ -0.77
CHD3-203ENST00000380358 IGKV2D-24A0A075B6R9 120 aa10.26□□□□□ -0.77
CHD3-203ENST00000380358 IGHV2-26A0A0B4J1V2 119 aa10.26□□□□□ -0.77
CHD3-203ENST00000380358 SPINK13Q1W4C9 94 aa10.26□□□□□ -0.77
CHD3-203ENST00000380358 TCTEX1D4Q5JR98 221 aa10.26□□□□□ -0.77
CHD3-203ENST00000380358 IGKV1-5P01602 117 aa10.26□□□□□ -0.77
CHD3-203ENST00000380358 RPL23P62829 140 aaKnown RBP10.26□□□□□ -0.77
CHD3-203ENST00000380358 RNASE13Q5GAN3 156 aaKnown RBP10.26□□□□□ -0.77
CHD3-203ENST00000380358 BAALCQ8WXS3 180 aa10.26□□□□□ -0.77
CHD3-203ENST00000380358 BPESC1Q9GZL8 116 aa10.26□□□□□ -0.77
CHD3-203ENST00000380358 TRAV12-2A0A075B6T6 113 aa10.26□□□□□ -0.77
CHD3-203ENST00000380358 PINLYPA6NC86 204 aa10.26□□□□□ -0.77
CHD3-203ENST00000380358 FAM90A10PA6NDY2 464 aa10.26□□□□□ -0.77
CHD3-203ENST00000380358 FAM90A18PA6NE21 464 aa10.26□□□□□ -0.77
CHD3-203ENST00000380358 FAM90A16PA6NEW6 464 aa10.26□□□□□ -0.77
CHD3-203ENST00000380358 FAM90A20PA6NIJ5 464 aa10.26□□□□□ -0.77
CHD3-203ENST00000380358 FAM90A8PA6NJQ4 464 aa10.26□□□□□ -0.77
CHD3-203ENST00000380358 FAM90A7PA6NKC0 464 aa10.26□□□□□ -0.77
CHD3-203ENST00000380358 FAM90A22PA8MWA6 464 aa10.26□□□□□ -0.77
CHD3-203ENST00000380358 FAM90A12PA8MX19 464 aa10.26□□□□□ -0.77
CHD3-203ENST00000380358 FAM90A5PA8MXJ8 464 aa10.26□□□□□ -0.77
CHD3-203ENST00000380358 FAM90A23PA8MXZ1 464 aa10.26□□□□□ -0.77
CHD3-203ENST00000380358 FAM90A15PP0C7V4 464 aa10.26□□□□□ -0.77
CHD3-203ENST00000380358 FAM90A13PP0C7W8 464 aa10.26□□□□□ -0.77
CHD3-203ENST00000380358 FAM90A14PP0C7W9 464 aa10.26□□□□□ -0.77
CHD3-203ENST00000380358 FAM90A24PP0C7X0 464 aa10.26□□□□□ -0.77
CHD3-203ENST00000380358 ZNF138P52744 262 aa10.26□□□□□ -0.77
CHD3-203ENST00000380358 IFI27L1Q96BM0 104 aa10.26□□□□□ -0.77
CHD3-203ENST00000380358 TMEM144Q7Z5S9 345 aa10.25□□□□□ -0.77
CHD3-203ENST00000380358 hDV102S1A0JD36 115 aa10.25□□□□□ -0.77
CHD3-203ENST00000380358 TMEM200BQ69YZ2 307 aa10.25□□□□□ -0.77
CHD3-203ENST00000380358 OVOL1O14753 267 aa10.25□□□□□ -0.77
CHD3-203ENST00000380358 SPATA31B1PQ5VZV4 182 aa10.25□□□□□ -0.77
CHD3-203ENST00000380358 TEX38Q6PEX7 206 aa10.25□□□□□ -0.77
CHD3-203ENST00000380358 RASL11AQ6T310 242 aa10.25□□□□□ -0.77
CHD3-203ENST00000380358 SMDT1Q9H4I9 107 aa10.25□□□□□ -0.77
CHD3-203ENST00000380358 PLCH1Q4KWH8 1693 aa10.25□□□□□ -0.77
CHD3-203ENST00000380358 MMP23AO75900 390 aa10.25□□□□□ -0.77
CHD3-203ENST00000380358 IGHV1-46P01743 117 aa10.25□□□□□ -0.77
CHD3-203ENST00000380358 PRCDQ00LT1 54 aa10.25□□□□□ -0.77
CHD3-203ENST00000380358 RPL18AQ02543 176 aaKnown RBP10.25□□□□□ -0.77
CHD3-203ENST00000380358 LYZL1Q6UWQ5 148 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms