RNA–Protein interactions for RNA: ENST00000379599.6

NHLRC3-201, Transcript of NHL repeat containing 3, humanhuman

TSL 1 (best) BASIC

Gene NHLRC3, Length 3,275 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC3-201ENST00000379599 ATP5IP56385 69 aaPredicted RBP6.91□□□□□ -1.3
NHLRC3-201ENST00000379599 FAM19A5Q7Z5A7 132 aaPredicted RBP6.91□□□□□ -1.3
NHLRC3-201ENST00000379599 GTSCR1Q86UQ5 136 aa6.91□□□□□ -1.3
NHLRC3-201ENST00000379599 YAF2Q8IY57 180 aa6.91□□□□□ -1.3
NHLRC3-201ENST00000379599 MKXQ8IYA7 352 aa6.91□□□□□ -1.3
NHLRC3-201ENST00000379599 TMEM133Q9H2Q1 129 aa6.91□□□□□ -1.3
NHLRC3-201ENST00000379599 TET1Q8NFU7 2136 aa6.9□□□□□ -1.3
NHLRC3-201ENST00000379599 P01737 135 aa6.9□□□□□ -1.3
NHLRC3-201ENST00000379599 PATE4P0C8F1 98 aa6.9□□□□□ -1.3
NHLRC3-201ENST00000379599 RHBDD2Q6NTF9 364 aa6.9□□□□□ -1.3
NHLRC3-201ENST00000379599 C16orf47Q6ZP98 133 aaPredicted RBP6.9□□□□□ -1.3
NHLRC3-201ENST00000379599 RPRMLQ8N4K4 120 aa6.9□□□□□ -1.3
NHLRC3-201ENST00000379599 PATE1Q8WXA2 126 aa6.9□□□□□ -1.3
NHLRC3-201ENST00000379599 IFI27L1Q96BM0 104 aa6.9□□□□□ -1.3
NHLRC3-201ENST00000379599 ZNF488Q96MN9 340 aa6.9□□□□□ -1.3
NHLRC3-201ENST00000379599 CDX2Q99626 313 aaPredicted RBP6.9□□□□□ -1.3
NHLRC3-201ENST00000379599 CHD7Q9P2D1 2997 aa6.9□□□□□ -1.3
NHLRC3-201ENST00000379599 A0A0J9YW62 118 aa6.9□□□□□ -1.31
NHLRC3-201ENST00000379599 A8MWV9 139 aa6.9□□□□□ -1.31
NHLRC3-201ENST00000379599 MOSP00540 346 aa6.9□□□□□ -1.31
NHLRC3-201ENST00000379599 LTBRP36941 435 aa6.9□□□□□ -1.31
NHLRC3-201ENST00000379599 UBE2L3P68036 154 aaKnown RBP6.9□□□□□ -1.31
NHLRC3-201ENST00000379599 RPEQ96AT9 228 aa6.9□□□□□ -1.31
NHLRC3-201ENST00000379599 NABP2Q9BQ15 211 aa6.9□□□□□ -1.31
NHLRC3-201ENST00000379599 RPP21Q9H633 154 aaKnown RBP6.9□□□□□ -1.31
NHLRC3-201ENST00000379599 DLL3Q9NYJ7 618 aa6.9□□□□□ -1.31
NHLRC3-201ENST00000379599 WIPF1O43516 503 aa6.89□□□□□ -1.31
NHLRC3-201ENST00000379599 COL8A1P27658 744 aa6.89□□□□□ -1.31
NHLRC3-201ENST00000379599 MPV17P39210 176 aa6.89□□□□□ -1.31
NHLRC3-201ENST00000379599 VEGFBP49765 207 aa6.89□□□□□ -1.31
NHLRC3-201ENST00000379599 SUMO3P55854 103 aaPredicted RBP6.89□□□□□ -1.31
NHLRC3-201ENST00000379599 LINC00205P59089 165 aa6.89□□□□□ -1.31
NHLRC3-201ENST00000379599 FGF12P61328 243 aa6.89□□□□□ -1.31
NHLRC3-201ENST00000379599 IGLV3-21P80748 117 aaPredicted RBP6.89□□□□□ -1.31
NHLRC3-201ENST00000379599 TMEM78Q5T7P6 136 aa6.89□□□□□ -1.31
NHLRC3-201ENST00000379599 FOXL2NBQ6ZUU3 175 aa6.89□□□□□ -1.31
NHLRC3-201ENST00000379599 CIARTQ8N365 385 aaPredicted RBP6.89□□□□□ -1.31
NHLRC3-201ENST00000379599 SLC25A33Q9BSK2 321 aa6.89□□□□□ -1.31
NHLRC3-201ENST00000379599 KLF13Q9Y2Y9 288 aaPredicted RBP6.89□□□□□ -1.31
NHLRC3-201ENST00000379599 A0A1W2PQD3 144 aa6.89□□□□□ -1.31
NHLRC3-201ENST00000379599 F5H768 121 aa6.89□□□□□ -1.31
NHLRC3-201ENST00000379599 CCL16O15467 120 aa6.89□□□□□ -1.31
NHLRC3-201ENST00000379599 HOXA3O43365 443 aaPredicted RBP6.89□□□□□ -1.31
NHLRC3-201ENST00000379599 SRSF9Q13242 221 aaKnown RBP eCLIP6.89□□□□□ -1.31
NHLRC3-201ENST00000379599 ZNF474Q6S9Z5 364 aaPredicted RBP6.89□□□□□ -1.31
NHLRC3-201ENST00000379599 RBPMS2Q6ZRY4 209 aaKnown RBP6.89□□□□□ -1.31
NHLRC3-201ENST00000379599 SMRP1Q8NCR6 262 aa6.89□□□□□ -1.31
NHLRC3-201ENST00000379599 TSACCQ96A04 125 aaPredicted RBP6.89□□□□□ -1.31
NHLRC3-201ENST00000379599 FAM234AQ9H0X4 552 aa6.89□□□□□ -1.31
NHLRC3-201ENST00000379599 Q9Y3F1 56 aa6.89□□□□□ -1.31
NHLRC3-201ENST00000379599 PTPRSQ13332 1948 aa6.89□□□□□ -1.31
NHLRC3-201ENST00000379599 GNG5P63218 68 aa6.89□□□□□ -1.31
NHLRC3-201ENST00000379599 ZFP2Q6ZN57 461 aa6.89□□□□□ -1.31
NHLRC3-201ENST00000379599 CHCHD5Q9BSY4 110 aa6.89□□□□□ -1.31
NHLRC3-201ENST00000379599 EDA2RQ9HAV5 297 aa6.89□□□□□ -1.31
NHLRC3-201ENST00000379599 SLC25A10Q9UBX3 287 aaPredicted RBP6.89□□□□□ -1.31
NHLRC3-201ENST00000379599 FAM90A10PA6NDY2 464 aa6.88□□□□□ -1.31
NHLRC3-201ENST00000379599 FAM90A20PA6NIJ5 464 aa6.88□□□□□ -1.31
NHLRC3-201ENST00000379599 FAM90A7PA6NKC0 464 aa6.88□□□□□ -1.31
NHLRC3-201ENST00000379599 FAM90A22PA8MWA6 464 aa6.88□□□□□ -1.31
NHLRC3-201ENST00000379599 FAM90A12PA8MX19 464 aa6.88□□□□□ -1.31
NHLRC3-201ENST00000379599 FAM90A5PA8MXJ8 464 aa6.88□□□□□ -1.31
NHLRC3-201ENST00000379599 FAM90A23PA8MXZ1 464 aa6.88□□□□□ -1.31
NHLRC3-201ENST00000379599 C9JAW5 83 aa6.88□□□□□ -1.31
NHLRC3-201ENST00000379599 ZNHIT1O43257 154 aa6.88□□□□□ -1.31
NHLRC3-201ENST00000379599 FAM90A15PP0C7V4 464 aa6.88□□□□□ -1.31
NHLRC3-201ENST00000379599 FAM90A13PP0C7W8 464 aa6.88□□□□□ -1.31
NHLRC3-201ENST00000379599 FAM90A14PP0C7W9 464 aa6.88□□□□□ -1.31
NHLRC3-201ENST00000379599 FAM90A24PP0C7X0 464 aa6.88□□□□□ -1.31
NHLRC3-201ENST00000379599 ANKRD29Q8N6D5 301 aa6.88□□□□□ -1.31
NHLRC3-201ENST00000379599 RASL10AQ92737 203 aa6.88□□□□□ -1.31
NHLRC3-201ENST00000379599 ZNF503Q96F45 646 aa6.88□□□□□ -1.31
NHLRC3-201ENST00000379599 HIGD1AQ9Y241 93 aa6.88□□□□□ -1.31
NHLRC3-201ENST00000379599 TMEM150CB9EJG8 249 aa6.88□□□□□ -1.31
NHLRC3-201ENST00000379599 PEX7O00628 323 aa6.88□□□□□ -1.31
NHLRC3-201ENST00000379599 PRSS1P07477 247 aa6.88□□□□□ -1.31
NHLRC3-201ENST00000379599 SRYQ05066 204 aa6.88□□□□□ -1.31
NHLRC3-201ENST00000379599 HES1Q14469 280 aa6.88□□□□□ -1.31
NHLRC3-201ENST00000379599 OR10J6PQ8NGY7 276 aa6.88□□□□□ -1.31
NHLRC3-201ENST00000379599 OR13C6PQ8NH95 151 aa6.88□□□□□ -1.31
NHLRC3-201ENST00000379599 ST8SIA1Q92185 356 aa6.88□□□□□ -1.31
NHLRC3-201ENST00000379599 C21orf62Q9NYP8 219 aa6.88□□□□□ -1.31
NHLRC3-201ENST00000379599 A0A1W2PP55 124 aa6.88□□□□□ -1.31
NHLRC3-201ENST00000379599 EFNA2O43921 213 aa6.88□□□□□ -1.31
NHLRC3-201ENST00000379599 OR1L4Q8NGR5 311 aa6.88□□□□□ -1.31
NHLRC3-201ENST00000379599 PRSS38A1L453 326 aa6.87□□□□□ -1.31
NHLRC3-201ENST00000379599 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP6.87□□□□□ -1.31
NHLRC3-201ENST00000379599 FAM53AQ6NSI3 398 aaPredicted RBP6.87□□□□□ -1.31
NHLRC3-201ENST00000379599 A0A096LNJ9 63 aa6.87□□□□□ -1.31
NHLRC3-201ENST00000379599 Q6ZS92 163 aa6.87□□□□□ -1.31
NHLRC3-201ENST00000379599 Q6ZSR3 168 aa6.87□□□□□ -1.31
NHLRC3-201ENST00000379599 C10orf126Q8N4M7 172 aa6.87□□□□□ -1.31
NHLRC3-201ENST00000379599 C15orf53Q8NAA6 179 aa6.87□□□□□ -1.31
NHLRC3-201ENST00000379599 EPDR1Q9UM22 224 aa6.87□□□□□ -1.31
NHLRC3-201ENST00000379599 DNAH14Q0VDD8 3507 aa6.87□□□□□ -1.31
NHLRC3-201ENST00000379599 LINC01549A6NIU2 74 aa6.86□□□□□ -1.31
NHLRC3-201ENST00000379599 J3KT08 172 aa6.86□□□□□ -1.31
NHLRC3-201ENST00000379599 DNPH1O43598 174 aa6.86□□□□□ -1.31
NHLRC3-201ENST00000379599 HBDP02042 147 aa6.86□□□□□ -1.31
NHLRC3-201ENST00000379599 P0C879 139 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms