RNA–Protein interactions for RNA: ENST00000379446.9

NEDD9-202, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NEDD9, Length 4,536 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-202ENST00000379446 NCOA6Q14686 2063 aaPredicted RBP5.34□□□□□ -1.55
NEDD9-202ENST00000379446 IGKV1-27A0A075B6S5 117 aa5.34□□□□□ -1.55
NEDD9-202ENST00000379446 TMSB15BA0A087X1C1 80 aa5.34□□□□□ -1.55
NEDD9-202ENST00000379446 C12orf77C9JDV5 145 aa5.34□□□□□ -1.55
NEDD9-202ENST00000379446 GCGP01275 180 aa5.34□□□□□ -1.55
NEDD9-202ENST00000379446 PAX8Q06710 450 aa5.34□□□□□ -1.55
NEDD9-202ENST00000379446 ACOT6Q3I5F7 207 aaPredicted RBP5.34□□□□□ -1.55
NEDD9-202ENST00000379446 TCF24Q7RTU0 167 aa5.34□□□□□ -1.55
NEDD9-202ENST00000379446 FAM89BQ8N5H3 189 aa5.34□□□□□ -1.55
NEDD9-202ENST00000379446 WNT10AQ9GZT5 417 aa5.34□□□□□ -1.55
NEDD9-202ENST00000379446 A0A087WX48 190 aa5.34□□□□□ -1.56
NEDD9-202ENST00000379446 IGKV1-12A0A0C4DH73 117 aa5.34□□□□□ -1.56
NEDD9-202ENST00000379446 IGKV1D-12P01611 117 aa5.34□□□□□ -1.56
NEDD9-202ENST00000379446 CNN1P51911 297 aaKnown RBP5.34□□□□□ -1.56
NEDD9-202ENST00000379446 MFAP2P55001 183 aa5.34□□□□□ -1.56
NEDD9-202ENST00000379446 TCL1AP56279 114 aa5.34□□□□□ -1.56
NEDD9-202ENST00000379446 TMEM256Q8N2U0 113 aa5.34□□□□□ -1.56
NEDD9-202ENST00000379446 CITED2Q99967 270 aaPredicted RBP5.34□□□□□ -1.56
NEDD9-202ENST00000379446 PEF1Q9UBV8 284 aaKnown RBP5.34□□□□□ -1.56
NEDD9-202ENST00000379446 PAX1P15863 534 aa5.33□□□□□ -1.56
NEDD9-202ENST00000379446 CCL1P22362 96 aa5.33□□□□□ -1.56
NEDD9-202ENST00000379446 C15orf32Q32M92 178 aa5.33□□□□□ -1.56
NEDD9-202ENST00000379446 FBXL19-AS1Q494R0 122 aa5.33□□□□□ -1.56
NEDD9-202ENST00000379446 FAM159AQ6UWV7 190 aa5.33□□□□□ -1.56
NEDD9-202ENST00000379446 LYPD6Q86Y78 171 aa5.33□□□□□ -1.56
NEDD9-202ENST00000379446 PDPNQ86YL7 162 aa5.33□□□□□ -1.56
NEDD9-202ENST00000379446 TM2D1Q9BX74 207 aa5.33□□□□□ -1.56
NEDD9-202ENST00000379446 TMEM140Q9NV12 185 aa5.33□□□□□ -1.56
NEDD9-202ENST00000379446 ZNF586Q9NXT0 402 aa5.33□□□□□ -1.56
NEDD9-202ENST00000379446 HSBP1L1C9JCN9 74 aa5.33□□□□□ -1.56
NEDD9-202ENST00000379446 CA1P00915 261 aaPredicted RBP5.33□□□□□ -1.56
NEDD9-202ENST00000379446 OTX1P32242 354 aaPredicted RBP5.33□□□□□ -1.56
NEDD9-202ENST00000379446 HLA-DRB5Q30154 266 aa5.33□□□□□ -1.56
NEDD9-202ENST00000379446 AARDQ4LEZ3 155 aa5.33□□□□□ -1.56
NEDD9-202ENST00000379446 DTX2Q86UW9 622 aa5.33□□□□□ -1.56
NEDD9-202ENST00000379446 TMEM252Q8N6L7 170 aa5.33□□□□□ -1.56
NEDD9-202ENST00000379446 OR4P4Q8NGL7 312 aa5.33□□□□□ -1.56
NEDD9-202ENST00000379446 RPRMQ9NS64 109 aa5.33□□□□□ -1.56
NEDD9-202ENST00000379446 ARL2-SNX15V9GYD0 113 aa5.33□□□□□ -1.56
NEDD9-202ENST00000379446 IGSF23A1L1A6 192 aa5.33□□□□□ -1.56
NEDD9-202ENST00000379446 FBLL1A6NHQ2 334 aaKnown RBP5.33□□□□□ -1.56
NEDD9-202ENST00000379446 AMY1AP04745 511 aa5.33□□□□□ -1.56
NEDD9-202ENST00000379446 PRR31Q5SQ13 230 aa5.33□□□□□ -1.56
NEDD9-202ENST00000379446 FAM169BQ8N8A8 192 aa5.33□□□□□ -1.56
NEDD9-202ENST00000379446 STAB1Q9NY15 2570 aa5.33□□□□□ -1.56
NEDD9-202ENST00000379446 TRIOO75962 3097 aa5.33□□□□□ -1.56
NEDD9-202ENST00000379446 SZT2Q5T011 3432 aa5.33□□□□□ -1.56
NEDD9-202ENST00000379446 CRXO43186 299 aaPredicted RBP5.33□□□□□ -1.56
NEDD9-202ENST00000379446 DKK1O94907 266 aa5.33□□□□□ -1.56
NEDD9-202ENST00000379446 PRSS8Q16651 343 aa5.33□□□□□ -1.56
NEDD9-202ENST00000379446 OXLD1Q5BKU9 147 aa5.33□□□□□ -1.56
NEDD9-202ENST00000379446 KLF17Q5JT82 389 aaPredicted RBP5.33□□□□□ -1.56
NEDD9-202ENST00000379446 ZNF818PQ6ZRF7 136 aa5.33□□□□□ -1.56
NEDD9-202ENST00000379446 SLC24A4Q8NFF2 622 aa5.33□□□□□ -1.56
NEDD9-202ENST00000379446 RBKSQ9H477 322 aa5.33□□□□□ -1.56
NEDD9-202ENST00000379446 FCN1O00602 326 aa5.32□□□□□ -1.56
NEDD9-202ENST00000379446 RRHO14718 337 aa5.32□□□□□ -1.56
NEDD9-202ENST00000379446 MLNRO43193 412 aa5.32□□□□□ -1.56
NEDD9-202ENST00000379446 IGLV2-23P01705 113 aa5.32□□□□□ -1.56
NEDD9-202ENST00000379446 IGLL1P15814 213 aa5.32□□□□□ -1.56
NEDD9-202ENST00000379446 CRISP2P16562 243 aa5.32□□□□□ -1.56
NEDD9-202ENST00000379446 RPL7P18124 248 aaKnown RBP5.32□□□□□ -1.56
NEDD9-202ENST00000379446 FXYD7P58549 80 aa5.32□□□□□ -1.56
NEDD9-202ENST00000379446 ICAM4Q14773 271 aa5.32□□□□□ -1.56
NEDD9-202ENST00000379446 SAPCD1Q5SSQ6 148 aa5.32□□□□□ -1.56
NEDD9-202ENST00000379446 CIARTQ8N365 385 aaPredicted RBP5.32□□□□□ -1.56
NEDD9-202ENST00000379446 PGPEP1LA6NFU8 196 aa5.32□□□□□ -1.56
NEDD9-202ENST00000379446 IGLL5B9A064 214 aa5.32□□□□□ -1.56
NEDD9-202ENST00000379446 DIRC3C9JPN6 131 aa5.32□□□□□ -1.56
NEDD9-202ENST00000379446 PAGE4O60829 102 aa5.32□□□□□ -1.56
NEDD9-202ENST00000379446 CCKARP32238 428 aa5.32□□□□□ -1.56
NEDD9-202ENST00000379446 DEFB131AP59861 70 aa5.32□□□□□ -1.56
NEDD9-202ENST00000379446 FBLN7Q53RD9 439 aa5.32□□□□□ -1.56
NEDD9-202ENST00000379446 C10orf113Q5VZT2 155 aa5.32□□□□□ -1.56
NEDD9-202ENST00000379446 FAM216AQ8WUB2 273 aa5.32□□□□□ -1.56
NEDD9-202ENST00000379446 ALKBH7Q9BT30 221 aaPredicted RBP5.32□□□□□ -1.56
NEDD9-202ENST00000379446 MBNL3Q9NUK0 354 aaKnown RBP5.32□□□□□ -1.56
NEDD9-202ENST00000379446 IGHV1-3A0A0C4DH29 117 aa5.32□□□□□ -1.56
NEDD9-202ENST00000379446 H3BTX0 84 aa5.32□□□□□ -1.56
NEDD9-202ENST00000379446 BCL2P10415 239 aa5.32□□□□□ -1.56
NEDD9-202ENST00000379446 CX3CL1P78423 397 aa5.32□□□□□ -1.56
NEDD9-202ENST00000379446 SPATA45Q537H7 98 aa5.32□□□□□ -1.56
NEDD9-202ENST00000379446 SPANXN1Q5VSR9 72 aa5.32□□□□□ -1.56
NEDD9-202ENST00000379446 TCTEX1D1Q8N7M0 179 aa5.32□□□□□ -1.56
NEDD9-202ENST00000379446 OSR1Q8TAX0 266 aaPredicted RBP5.32□□□□□ -1.56
NEDD9-202ENST00000379446 RNASE8Q8TDE3 154 aaKnown RBP5.32□□□□□ -1.56
NEDD9-202ENST00000379446 TMEM222Q9H0R3 208 aa5.32□□□□□ -1.56
NEDD9-202ENST00000379446 PROK2Q9HC23 129 aa5.32□□□□□ -1.56
NEDD9-202ENST00000379446 MANBALQ9NQG1 85 aa5.32□□□□□ -1.56
NEDD9-202ENST00000379446 ANKRD17O75179 2603 aaKnown RBP5.31□□□□□ -1.56
NEDD9-202ENST00000379446 LYL1P12980 280 aa5.31□□□□□ -1.56
NEDD9-202ENST00000379446 IER3P46695 156 aa5.31□□□□□ -1.56
NEDD9-202ENST00000379446 RSPO1Q2MKA7 263 aaPredicted RBP5.31□□□□□ -1.56
NEDD9-202ENST00000379446 OR10J3Q5JRS4 329 aa5.31□□□□□ -1.56
NEDD9-202ENST00000379446 SYT8Q8NBV8 401 aa5.31□□□□□ -1.56
NEDD9-202ENST00000379446 MRPL30Q8TCC3 161 aaKnown RBP5.31□□□□□ -1.56
NEDD9-202ENST00000379446 CHRDL1Q9BU40 450 aa5.31□□□□□ -1.56
NEDD9-202ENST00000379446 XCL2Q9UBD3 114 aa5.31□□□□□ -1.56
NEDD9-202ENST00000379446 IGKV1D-13A0A0B4J2D9 117 aa5.31□□□□□ -1.56
NEDD9-202ENST00000379446 G3V318 75 aa5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms