RNA–Protein interactions for RNA: ENST00000379433.5

NEDD9-201, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 1 (best) BASIC

Gene NEDD9, Length 3,341 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-201ENST00000379433 KLRD1Q13241 179 aa8.76□□□□□ -1.01
NEDD9-201ENST00000379433 PLGLAQ15195 96 aa8.76□□□□□ -1.01
NEDD9-201ENST00000379433 TCF24Q7RTU0 167 aa8.76□□□□□ -1.01
NEDD9-201ENST00000379433 STPG4Q8N801 248 aa8.76□□□□□ -1.01
NEDD9-201ENST00000379433 TMEM147Q9BVK8 224 aa8.76□□□□□ -1.01
NEDD9-201ENST00000379433 NPCDR1Q9BY65 106 aa8.76□□□□□ -1.01
NEDD9-201ENST00000379433 COMMD5Q9GZQ3 224 aa8.76□□□□□ -1.01
NEDD9-201ENST00000379433 PLEKHA3Q9HB20 300 aa8.76□□□□□ -1.01
NEDD9-201ENST00000379433 DOPEY1Q5JWR5 2465 aa8.76□□□□□ -1.01
NEDD9-201ENST00000379433 A0A1W2PPR1 153 aa8.76□□□□□ -1.01
NEDD9-201ENST00000379433 FAM157AC9JC47 383 aa8.76□□□□□ -1.01
NEDD9-201ENST00000379433 APOA2P02652 100 aa8.76□□□□□ -1.01
NEDD9-201ENST00000379433 MMP9P14780 707 aa8.76□□□□□ -1.01
NEDD9-201ENST00000379433 TEX36Q5VZQ5 186 aa8.76□□□□□ -1.01
NEDD9-201ENST00000379433 GBGT1Q8N5D6 347 aa8.76□□□□□ -1.01
NEDD9-201ENST00000379433 FLYWCH2Q96CP2 140 aaKnown RBP8.76□□□□□ -1.01
NEDD9-201ENST00000379433 THBS3P49746 956 aa8.75□□□□□ -1.01
NEDD9-201ENST00000379433 HES1Q14469 280 aa8.75□□□□□ -1.01
NEDD9-201ENST00000379433 MMDQ15546 238 aa8.75□□□□□ -1.01
NEDD9-201ENST00000379433 ZNF343Q6P1L6 599 aa8.75□□□□□ -1.01
NEDD9-201ENST00000379433 OR4F5Q8NH21 305 aa8.75□□□□□ -1.01
NEDD9-201ENST00000379433 OR4F4Q96R69 305 aa8.75□□□□□ -1.01
NEDD9-201ENST00000379433 DERL1Q9BUN8 251 aa8.75□□□□□ -1.01
NEDD9-201ENST00000379433 SRD5A3Q9H8P0 318 aa8.75□□□□□ -1.01
NEDD9-201ENST00000379433 HRASP01112 189 aa8.75□□□□□ -1.01
NEDD9-201ENST00000379433 MDKP21741 143 aaPredicted RBP8.75□□□□□ -1.01
NEDD9-201ENST00000379433 NPY1RP25929 384 aa8.75□□□□□ -1.01
NEDD9-201ENST00000379433 RHEBQ15382 184 aa8.75□□□□□ -1.01
NEDD9-201ENST00000379433 SPATA31B1PQ5VZV4 182 aa8.75□□□□□ -1.01
NEDD9-201ENST00000379433 SLC25A48Q6ZT89 311 aaKnown RBP8.75□□□□□ -1.01
NEDD9-201ENST00000379433 ZNF429Q86V71 674 aa8.75□□□□□ -1.01
NEDD9-201ENST00000379433 RNF183Q96D59 192 aa8.75□□□□□ -1.01
NEDD9-201ENST00000379433 ZNF586Q9NXT0 402 aa8.75□□□□□ -1.01
NEDD9-201ENST00000379433 PIGBOS1A0A0B4J2F0 54 aa8.75□□□□□ -1.01
NEDD9-201ENST00000379433 H3BQ15 152 aa8.75□□□□□ -1.01
NEDD9-201ENST00000379433 USF1P22415 310 aaPredicted RBP8.75□□□□□ -1.01
NEDD9-201ENST00000379433 PPOXP50336 477 aa8.75□□□□□ -1.01
NEDD9-201ENST00000379433 HEPN1Q6WQI6 88 aa8.75□□□□□ -1.01
NEDD9-201ENST00000379433 OR51G1Q8NGK1 321 aa8.75□□□□□ -1.01
NEDD9-201ENST00000379433 MIEN1Q9BRT3 115 aa8.75□□□□□ -1.01
NEDD9-201ENST00000379433 CGB1A6NKQ9 187 aa8.74□□□□□ -1.01
NEDD9-201ENST00000379433 C19orf84I3L1E1 186 aa8.74□□□□□ -1.01
NEDD9-201ENST00000379433 ZNF207O43670 478 aaKnown RBP8.74□□□□□ -1.01
NEDD9-201ENST00000379433 PAGE4O60829 102 aa8.74□□□□□ -1.01
NEDD9-201ENST00000379433 HIST1H1AQ02539 215 aaPredicted RBP8.74□□□□□ -1.01
NEDD9-201ENST00000379433 ICAM4Q14773 271 aa8.74□□□□□ -1.01
NEDD9-201ENST00000379433 FAM110DQ8TAY7 271 aaPredicted RBP8.74□□□□□ -1.01
NEDD9-201ENST00000379433 C20orf144Q9BQM9 153 aa8.74□□□□□ -1.01
NEDD9-201ENST00000379433 S4R3C0 116 aa8.74□□□□□ -1.01
NEDD9-201ENST00000379433 IFNA1P01562 189 aa8.74□□□□□ -1.01
NEDD9-201ENST00000379433 P0C879 139 aa8.74□□□□□ -1.01
NEDD9-201ENST00000379433 NEU4Q8WWR8 484 aaPredicted RBP8.74□□□□□ -1.01
NEDD9-201ENST00000379433 C15orf61A6NNL5 157 aa8.74□□□□□ -1.01
NEDD9-201ENST00000379433 FAM90A26D6RGX4 464 aa8.74□□□□□ -1.01
NEDD9-201ENST00000379433 IGHV1-8P0DP01 117 aa8.74□□□□□ -1.01
NEDD9-201ENST00000379433 IGFBP2P18065 325 aa8.74□□□□□ -1.01
NEDD9-201ENST00000379433 HSPE1P61604 102 aaKnown RBP8.74□□□□□ -1.01
NEDD9-201ENST00000379433 GNB2P62879 340 aa8.74□□□□□ -1.01
NEDD9-201ENST00000379433 ADIRFQ15847 76 aa8.74□□□□□ -1.01
NEDD9-201ENST00000379433 CLDND2Q8NHS1 167 aa8.74□□□□□ -1.01
NEDD9-201ENST00000379433 TMEM170AQ8WVE7 144 aa8.74□□□□□ -1.01
NEDD9-201ENST00000379433 MALSU1Q96EH3 234 aa8.74□□□□□ -1.01
NEDD9-201ENST00000379433 INSIG2Q9Y5U4 225 aa8.74□□□□□ -1.01
NEDD9-201ENST00000379433 IGHV3OR16-10A0A075B7F0 116 aa8.73□□□□□ -1.01
NEDD9-201ENST00000379433 C1QL4Q86Z23 238 aa8.73□□□□□ -1.01
NEDD9-201ENST00000379433 ZNF439Q8NDP4 499 aa8.73□□□□□ -1.01
NEDD9-201ENST00000379433 OR2T6Q8NHC8 308 aa8.73□□□□□ -1.01
NEDD9-201ENST00000379433 DDB2Q92466 427 aa8.73□□□□□ -1.01
NEDD9-201ENST00000379433 RAB39BQ96DA2 213 aa8.73□□□□□ -1.01
NEDD9-201ENST00000379433 NIPSNAP3BQ9BS92 247 aa8.73□□□□□ -1.01
NEDD9-201ENST00000379433 FAM103A1Q9BTL3 118 aaKnown RBP8.73□□□□□ -1.01
NEDD9-201ENST00000379433 KIAA1456Q9P272 454 aa8.73□□□□□ -1.01
NEDD9-201ENST00000379433 V9GYY9 64 aa8.73□□□□□ -1.01
NEDD9-201ENST00000379433 DLK1P80370 383 aa8.73□□□□□ -1.01
NEDD9-201ENST00000379433 TREML4Q6UXN2 200 aa8.73□□□□□ -1.01
NEDD9-201ENST00000379433 OPRK1P41145 380 aa8.72□□□□□ -1.01
NEDD9-201ENST00000379433 LFNGQ8NES3 379 aa8.72□□□□□ -1.01
NEDD9-201ENST00000379433 ABHD5Q8WTS1 349 aa8.72□□□□□ -1.01
NEDD9-201ENST00000379433 BLNKQ8WV28 456 aa8.72□□□□□ -1.01
NEDD9-201ENST00000379433 RPEQ96AT9 228 aa8.72□□□□□ -1.01
NEDD9-201ENST00000379433 SCRT1Q9BWW7 348 aa8.72□□□□□ -1.01
NEDD9-201ENST00000379433 ANKRD17O75179 2603 aaKnown RBP8.72□□□□□ -1.01
NEDD9-201ENST00000379433 TEX50A0A1B0GTY4 177 aa8.72□□□□□ -1.01
NEDD9-201ENST00000379433 PMS2P5A8MQ11 134 aa8.72□□□□□ -1.01
NEDD9-201ENST00000379433 H0YJW9 148 aa8.72□□□□□ -1.01
NEDD9-201ENST00000379433 KBTBD11O94819 623 aa8.72□□□□□ -1.01
NEDD9-201ENST00000379433 HBE1P02100 147 aa8.72□□□□□ -1.01
NEDD9-201ENST00000379433 SRP19P09132 144 aaKnown RBP8.72□□□□□ -1.01
NEDD9-201ENST00000379433 FER1L6-AS1Q8NA97 138 aa8.72□□□□□ -1.01
NEDD9-201ENST00000379433 OR9G1Q8NH87 305 aa8.72□□□□□ -1.01
NEDD9-201ENST00000379433 PXMP4Q9Y6I8 212 aa8.72□□□□□ -1.01
NEDD9-201ENST00000379433 J3QLI3 93 aa8.72□□□□□ -1.01
NEDD9-201ENST00000379433 BCL2P10415 239 aa8.72□□□□□ -1.01
NEDD9-201ENST00000379433 RPL8P62917 257 aaKnown RBP8.72□□□□□ -1.01
NEDD9-201ENST00000379433 TDRG1Q3Y452 100 aa8.72□□□□□ -1.01
NEDD9-201ENST00000379433 BTF3L4Q96K17 158 aa8.72□□□□□ -1.01
NEDD9-201ENST00000379433 MYO9AB2RTY4 2548 aa8.72□□□□□ -1.01
NEDD9-201ENST00000379433 IGHV2-26A0A0B4J1V2 119 aa8.71□□□□□ -1.01
NEDD9-201ENST00000379433 HIST1H2BKO60814 126 aa8.71□□□□□ -1.01
NEDD9-201ENST00000379433 HIST1H2BJP06899 126 aa8.71□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms