RNA–Protein interactions for RNA: ENST00000378060.8

VPS36-201, Transcript of vacuolar protein sorting 36 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS36, Length 4,417 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-201ENST00000378060 C2orf88Q9BSF0 95 aa6.95□□□□□ -1.3
VPS36-201ENST00000378060 COL5A1P20908 1838 aaPredicted RBP6.94□□□□□ -1.3
VPS36-201ENST00000378060 FAM90A2PQ658T7 463 aa6.94□□□□□ -1.3
VPS36-201ENST00000378060 RNF144BQ7Z419 303 aa6.94□□□□□ -1.3
VPS36-201ENST00000378060 PPP1R27Q86WC6 154 aa6.94□□□□□ -1.3
VPS36-201ENST00000378060 FAM57AQ8TBR7 257 aa6.94□□□□□ -1.3
VPS36-201ENST00000378060 C18orf15Q96N68 181 aa6.94□□□□□ -1.3
VPS36-201ENST00000378060 KLK15Q9H2R5 256 aa6.94□□□□□ -1.3
VPS36-201ENST00000378060 MS4A6AQ9H2W1 248 aa6.94□□□□□ -1.3
VPS36-201ENST00000378060 FBXL7Q9UJT9 491 aa6.94□□□□□ -1.3
VPS36-201ENST00000378060 LINC01559Q495D7 138 aa6.94□□□□□ -1.3
VPS36-201ENST00000378060 ACTL10Q5JWF8 245 aa6.94□□□□□ -1.3
VPS36-201ENST00000378060 SPSB3Q6PJ21 355 aa6.94□□□□□ -1.3
VPS36-201ENST00000378060 SPCS1Q9Y6A9 102 aa6.94□□□□□ -1.3
VPS36-201ENST00000378060 ATRXP46100 2492 aa6.94□□□□□ -1.3
VPS36-201ENST00000378060 C5orf63A6NC05 138 aa6.94□□□□□ -1.3
VPS36-201ENST00000378060 C9orf172C9J069 976 aa6.94□□□□□ -1.3
VPS36-201ENST00000378060 NUTF2P61970 127 aaKnown RBP6.94□□□□□ -1.3
VPS36-201ENST00000378060 ADIPOQQ15848 244 aa6.94□□□□□ -1.3
VPS36-201ENST00000378060 RNFT1Q5M7Z0 435 aa6.94□□□□□ -1.3
VPS36-201ENST00000378060 NEU4Q8WWR8 484 aaPredicted RBP6.94□□□□□ -1.3
VPS36-201ENST00000378060 ST6GALNAC6Q969X2 333 aa6.94□□□□□ -1.3
VPS36-201ENST00000378060 NXT2Q9NPJ8 142 aaKnown RBP6.94□□□□□ -1.3
VPS36-201ENST00000378060 DOCK7Q96N67 2140 aa6.94□□□□□ -1.3
VPS36-201ENST00000378060 PKDREJQ9NTG1 2253 aa6.94□□□□□ -1.3
VPS36-201ENST00000378060 ATXN7O15265 892 aaPredicted RBP6.94□□□□□ -1.3
VPS36-201ENST00000378060 PSPNO60542 156 aa6.94□□□□□ -1.3
VPS36-201ENST00000378060 HBDP02042 147 aa6.94□□□□□ -1.3
VPS36-201ENST00000378060 CCL3L1P16619 93 aa6.94□□□□□ -1.3
VPS36-201ENST00000378060 SEC11AP67812 179 aa6.94□□□□□ -1.3
VPS36-201ENST00000378060 C19orf54Q5BKX5 351 aa6.94□□□□□ -1.3
VPS36-201ENST00000378060 TMEM133Q9H2Q1 129 aa6.94□□□□□ -1.3
VPS36-201ENST00000378060 FNDC10F2Z333 226 aa6.93□□□□□ -1.3
VPS36-201ENST00000378060 PYYP10082 97 aa6.93□□□□□ -1.3
VPS36-201ENST00000378060 ASIPP42127 132 aa6.93□□□□□ -1.3
VPS36-201ENST00000378060 HGFACQ04756 655 aa6.93□□□□□ -1.3
VPS36-201ENST00000378060 C10orf91Q5T1B1 145 aa6.93□□□□□ -1.3
VPS36-201ENST00000378060 PIP4P1Q86T03 277 aa6.93□□□□□ -1.3
VPS36-201ENST00000378060 ARPC1AQ92747 370 aa6.93□□□□□ -1.3
VPS36-201ENST00000378060 SLC50A1Q9BRV3 221 aa6.93□□□□□ -1.3
VPS36-201ENST00000378060 IGHV3-35A0A0C4DH35 117 aa6.93□□□□□ -1.3
VPS36-201ENST00000378060 A0A1B0GV72 72 aa6.93□□□□□ -1.3
VPS36-201ENST00000378060 PINLYPA6NC86 204 aa6.93□□□□□ -1.3
VPS36-201ENST00000378060 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.93□□□□□ -1.3
VPS36-201ENST00000378060 H7C1H1 209 aa6.93□□□□□ -1.3
VPS36-201ENST00000378060 H7C2G1 150 aa6.93□□□□□ -1.3
VPS36-201ENST00000378060 FOXG1P55316 489 aaPredicted RBP6.93□□□□□ -1.3
VPS36-201ENST00000378060 SLC25A48Q6ZT89 311 aaKnown RBP6.93□□□□□ -1.3
VPS36-201ENST00000378060 RNF125Q96EQ8 232 aa6.93□□□□□ -1.3
VPS36-201ENST00000378060 SCGB3A1Q96QR1 104 aa6.93□□□□□ -1.3
VPS36-201ENST00000378060 FOXC2Q99958 501 aa6.93□□□□□ -1.3
VPS36-201ENST00000378060 SSBP4Q9BWG4 385 aaPredicted RBP6.93□□□□□ -1.3
VPS36-201ENST00000378060 VCX2Q9H322 139 aa6.93□□□□□ -1.3
VPS36-201ENST00000378060 PSG8Q9UQ74 426 aa6.93□□□□□ -1.3
VPS36-201ENST00000378060 DOCK11Q5JSL3 2073 aa6.93□□□□□ -1.3
VPS36-201ENST00000378060 C9JQL5 133 aa6.93□□□□□ -1.3
VPS36-201ENST00000378060 TFPI2P48307 235 aa6.93□□□□□ -1.3
VPS36-201ENST00000378060 TMPRSS3P57727 454 aa6.93□□□□□ -1.3
VPS36-201ENST00000378060 SNRPD3P62318 126 aaKnown RBP6.93□□□□□ -1.3
VPS36-201ENST00000378060 FBLN7Q53RD9 439 aa6.93□□□□□ -1.3
VPS36-201ENST00000378060 SAMD13Q5VXD3 122 aa6.93□□□□□ -1.3
VPS36-201ENST00000378060 OR5AN1Q8NGI8 311 aa6.93□□□□□ -1.3
VPS36-201ENST00000378060 C1orf147Q96MC9 270 aaPredicted RBP6.93□□□□□ -1.3
VPS36-201ENST00000378060 BSNQ9UPA5 3926 aa6.93□□□□□ -1.3
VPS36-201ENST00000378060 NBR2O15453 112 aa6.92□□□□□ -1.3
VPS36-201ENST00000378060 IGKV1D-33P01593 117 aa6.92□□□□□ -1.3
VPS36-201ENST00000378060 IGKV1-33P01594 117 aa6.92□□□□□ -1.3
VPS36-201ENST00000378060 GNG5P63218 68 aa6.92□□□□□ -1.3
VPS36-201ENST00000378060 BSPH1Q075Z2 132 aa6.92□□□□□ -1.3
VPS36-201ENST00000378060 Q6P435 159 aa6.92□□□□□ -1.3
VPS36-201ENST00000378060 NUDT10Q8NFP7 164 aa6.92□□□□□ -1.3
VPS36-201ENST00000378060 C8orf46Q8TAG6 207 aa6.92□□□□□ -1.3
VPS36-201ENST00000378060 NUDT11Q96G61 164 aa6.92□□□□□ -1.3
VPS36-201ENST00000378060 JKAMPQ9P055 326 aa6.92□□□□□ -1.3
VPS36-201ENST00000378060 NCOR2Q9Y618 2525 aa6.92□□□□□ -1.3
VPS36-201ENST00000378060 PTPRBP23467 1997 aa6.92□□□□□ -1.3
VPS36-201ENST00000378060 IGHV1-18A0A0C4DH31 117 aa6.92□□□□□ -1.3
VPS36-201ENST00000378060 A0A0G2JLM5 398 aa6.92□□□□□ -1.3
VPS36-201ENST00000378060 ST6GALNAC3Q8NDV1 305 aa6.92□□□□□ -1.3
VPS36-201ENST00000378060 MRPL16Q9NX20 251 aaKnown RBP6.92□□□□□ -1.3
VPS36-201ENST00000378060 MRPL27Q9P0M9 148 aaKnown RBP6.92□□□□□ -1.3
VPS36-201ENST00000378060 DIDO1Q9BTC0 2240 aaKnown RBP6.92□□□□□ -1.3
VPS36-201ENST00000378060 DLEU1O43261 78 aa6.92□□□□□ -1.3
VPS36-201ENST00000378060 TEX29Q8N6K0 151 aa6.92□□□□□ -1.3
VPS36-201ENST00000378060 MGST2Q99735 147 aa6.92□□□□□ -1.3
VPS36-201ENST00000378060 GEMIN7Q9H840 131 aaKnown RBP6.92□□□□□ -1.3
VPS36-201ENST00000378060 SHANK1Q9Y566 2161 aa6.92□□□□□ -1.3
VPS36-201ENST00000378060 A0A1B0GWB2 263 aa6.92□□□□□ -1.3
VPS36-201ENST00000378060 SNAI2O43623 268 aa6.92□□□□□ -1.3
VPS36-201ENST00000378060 TTC32Q5I0X7 151 aa6.92□□□□□ -1.3
VPS36-201ENST00000378060 TMEM170BQ5T4T1 132 aa6.92□□□□□ -1.3
VPS36-201ENST00000378060 TMEM256Q8N2U0 113 aa6.92□□□□□ -1.3
VPS36-201ENST00000378060 OR5A1Q8NGJ0 315 aa6.92□□□□□ -1.3
VPS36-201ENST00000378060 PLSCR4Q9NRQ2 329 aa6.92□□□□□ -1.3
VPS36-201ENST00000378060 RFNGQ9Y644 331 aa6.92□□□□□ -1.3
VPS36-201ENST00000378060 LINC01549A6NIU2 74 aa6.91□□□□□ -1.3
VPS36-201ENST00000378060 M0R381 172 aa6.91□□□□□ -1.3
VPS36-201ENST00000378060 IL18BPO95998 194 aa6.91□□□□□ -1.3
VPS36-201ENST00000378060 TRGV3P03979 118 aa6.91□□□□□ -1.3
VPS36-201ENST00000378060 ZNF56Q15929 161 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms