RNA–Protein interactions for RNA: ENST00000378026.4

CKAP4-201, Transcript of cytoskeleton associated protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CKAP4, Length 3,093 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-201ENST00000378026 C2orf91Q6ZV80 131 aa12.82□□□□□ -0.36
CKAP4-201ENST00000378026 BHLHA15Q7RTS1 189 aaPredicted RBP12.82□□□□□ -0.36
CKAP4-201ENST00000378026 H1FXQ92522 213 aaKnown RBP12.82□□□□□ -0.36
CKAP4-201ENST00000378026 SMIM12Q96EX1 92 aa12.82□□□□□ -0.36
CKAP4-201ENST00000378026 TMEM97Q5BJF2 176 aa12.81□□□□□ -0.36
CKAP4-201ENST00000378026 PET117Q6UWS5 81 aa12.81□□□□□ -0.36
CKAP4-201ENST00000378026 TPPP3Q9BW30 176 aa12.81□□□□□ -0.36
CKAP4-201ENST00000378026 DSCAMO60469 2012 aa12.81□□□□□ -0.36
CKAP4-201ENST00000378026 GOSR1O95249 250 aa12.81□□□□□ -0.36
CKAP4-201ENST00000378026 FXYD7P58549 80 aa12.81□□□□□ -0.36
CKAP4-201ENST00000378026 ERHP84090 104 aaKnown RBP12.81□□□□□ -0.36
CKAP4-201ENST00000378026 FLYWCH2Q96CP2 140 aaKnown RBP12.81□□□□□ -0.36
CKAP4-201ENST00000378026 ROS1P08922 2347 aa12.81□□□□□ -0.36
CKAP4-201ENST00000378026 KBTBD11-OT1A0A1B0GTJ5 212 aa12.8□□□□□ -0.36
CKAP4-201ENST00000378026 APOHP02749 345 aaPredicted RBP12.8□□□□□ -0.36
CKAP4-201ENST00000378026 MSMPQ1L6U9 139 aa12.8□□□□□ -0.36
CKAP4-201ENST00000378026 ATP1A1-AS1Q5TC04 95 aa12.8□□□□□ -0.36
CKAP4-201ENST00000378026 OR8A1Q8NGG7 326 aa12.8□□□□□ -0.36
CKAP4-201ENST00000378026 DLL1O00548 723 aa12.8□□□□□ -0.36
CKAP4-201ENST00000378026 CIARTQ8N365 385 aaPredicted RBP12.8□□□□□ -0.36
CKAP4-201ENST00000378026 OR1L4Q8NGR5 311 aa12.8□□□□□ -0.36
CKAP4-201ENST00000378026 OR1L8Q8NGR8 309 aa12.8□□□□□ -0.36
CKAP4-201ENST00000378026 HARBI1Q96MB7 349 aa12.8□□□□□ -0.36
CKAP4-201ENST00000378026 JMJD8Q96S16 334 aa12.8□□□□□ -0.36
CKAP4-201ENST00000378026 HSPB8Q9UJY1 196 aa12.8□□□□□ -0.36
CKAP4-201ENST00000378026 TMEM11P17152 192 aa12.8□□□□□ -0.36
CKAP4-201ENST00000378026 COL8A1P27658 744 aa12.8□□□□□ -0.36
CKAP4-201ENST00000378026 C1RLQ9NZP8 487 aa12.8□□□□□ -0.36
CKAP4-201ENST00000378026 GPR179Q6PRD1 2367 aa12.79□□□□□ -0.36
CKAP4-201ENST00000378026 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.79□□□□□ -0.36
CKAP4-201ENST00000378026 COX8AP10176 69 aa12.79□□□□□ -0.36
CKAP4-201ENST00000378026 ACP1P24666 158 aa12.79□□□□□ -0.36
CKAP4-201ENST00000378026 RUSC1-AS1Q66K80 236 aa12.79□□□□□ -0.36
CKAP4-201ENST00000378026 RBPMS2Q6ZRY4 209 aaKnown RBP12.79□□□□□ -0.36
CKAP4-201ENST00000378026 ITLN1Q8WWA0 313 aa12.79□□□□□ -0.36
CKAP4-201ENST00000378026 ZNF430Q9H8G1 570 aaPredicted RBP12.79□□□□□ -0.36
CKAP4-201ENST00000378026 TRIOBPQ9H2D6 2365 aa12.79□□□□□ -0.36
CKAP4-201ENST00000378026 LOC389332A0A1B0GUA5 103 aa12.79□□□□□ -0.36
CKAP4-201ENST00000378026 IGKV3-15P01624 115 aa12.79□□□□□ -0.36
CKAP4-201ENST00000378026 GUSBP1Q15486 140 aa12.79□□□□□ -0.36
CKAP4-201ENST00000378026 PEAR1Q5VY43 1037 aaPredicted RBP12.79□□□□□ -0.36
CKAP4-201ENST00000378026 ZNF714Q96N38 554 aa12.79□□□□□ -0.36
CKAP4-201ENST00000378026 MS4A6AQ9H2W1 248 aa12.79□□□□□ -0.36
CKAP4-201ENST00000378026 C9orf172C9J069 976 aa12.78□□□□□ -0.36
CKAP4-201ENST00000378026 NBEAP1P0C6P0 100 aa12.78□□□□□ -0.36
CKAP4-201ENST00000378026 CLEC2AQ6UVW9 174 aa12.78□□□□□ -0.36
CKAP4-201ENST00000378026 Q6ZT83 130 aa12.78□□□□□ -0.36
CKAP4-201ENST00000378026 ADTRPQ96IZ2 230 aa12.78□□□□□ -0.36
CKAP4-201ENST00000378026 SPENQ96T58 3664 aaKnown RBP12.78□□□□□ -0.36
CKAP4-201ENST00000378026 TMEM265A0A087WTH1 108 aa12.78□□□□□ -0.36
CKAP4-201ENST00000378026 hADV38S2A0JD32 116 aa12.78□□□□□ -0.36
CKAP4-201ENST00000378026 FAM106CPP0CH98 169 aa12.78□□□□□ -0.36
CKAP4-201ENST00000378026 FAM106AQ4KMX7 169 aa12.78□□□□□ -0.36
CKAP4-201ENST00000378026 TM4SF20Q53R12 229 aa12.78□□□□□ -0.36
CKAP4-201ENST00000378026 CCL13Q99616 98 aa12.78□□□□□ -0.36
CKAP4-201ENST00000378026 RABAC1Q9UI14 185 aa12.78□□□□□ -0.36
CKAP4-201ENST00000378026 TCRBV4S1A1TA0A5B7 111 aa12.77□□□□□ -0.36
CKAP4-201ENST00000378026 FAM87AP0C7U9 286 aa12.77□□□□□ -0.36
CKAP4-201ENST00000378026 SP9P0CG40 484 aa12.77□□□□□ -0.36
CKAP4-201ENST00000378026 WT1-ASQ06250 92 aa12.77□□□□□ -0.36
CKAP4-201ENST00000378026 GTF2H5Q6ZYL4 71 aa12.77□□□□□ -0.36
CKAP4-201ENST00000378026 PRSS3P2Q8NHM4 247 aa12.77□□□□□ -0.36
CKAP4-201ENST00000378026 NEU4Q8WWR8 484 aaPredicted RBP12.77□□□□□ -0.36
CKAP4-201ENST00000378026 AP5S1Q9NUS5 200 aa12.77□□□□□ -0.36
CKAP4-201ENST00000378026 CGB3P0DN86 165 aa12.77□□□□□ -0.37
CKAP4-201ENST00000378026 CGB7P0DN87 165 aa12.77□□□□□ -0.37
CKAP4-201ENST00000378026 CR1LQ2VPA4 569 aa12.77□□□□□ -0.37
CKAP4-201ENST00000378026 HCP5Q6MZN7 132 aa12.77□□□□□ -0.37
CKAP4-201ENST00000378026 PRSS57Q6UWY2 283 aa12.77□□□□□ -0.37
CKAP4-201ENST00000378026 PRNTQ86SH4 94 aa12.77□□□□□ -0.37
CKAP4-201ENST00000378026 FAM216BQ8N7L0 139 aa12.77□□□□□ -0.37
CKAP4-201ENST00000378026 MRPL20Q9BYC9 149 aaKnown RBP12.77□□□□□ -0.37
CKAP4-201ENST00000378026 INTS1Q8N201 2190 aaKnown RBP12.77□□□□□ -0.37
CKAP4-201ENST00000378026 IGKV1D-37A0A075B6S9 117 aa12.77□□□□□ -0.37
CKAP4-201ENST00000378026 NHLH1Q02575 133 aa12.77□□□□□ -0.37
CKAP4-201ENST00000378026 POU2AF1Q16633 256 aa12.77□□□□□ -0.37
CKAP4-201ENST00000378026 LINC01545Q5VT33 79 aa12.77□□□□□ -0.37
CKAP4-201ENST00000378026 CACNG8Q8WXS5 425 aa12.77□□□□□ -0.37
CKAP4-201ENST00000378026 MLST8Q9BVC4 326 aa12.77□□□□□ -0.37
CKAP4-201ENST00000378026 PLCE1Q9P212 2302 aa12.76□□□□□ -0.37
CKAP4-201ENST00000378026 PAX2Q02962 417 aa12.76□□□□□ -0.37
CKAP4-201ENST00000378026 C5orf17Q8NAS9 161 aa12.76□□□□□ -0.37
CKAP4-201ENST00000378026 OR1N2Q8NGR9 330 aa12.76□□□□□ -0.37
CKAP4-201ENST00000378026 PRSS22Q9GZN4 317 aa12.76□□□□□ -0.37
CKAP4-201ENST00000378026 NDUFA4L2Q9NRX3 87 aa12.76□□□□□ -0.37
CKAP4-201ENST00000378026 THYN1Q9P016 225 aa12.76□□□□□ -0.37
CKAP4-201ENST00000378026 IGHV1-18A0A0C4DH31 117 aa12.76□□□□□ -0.37
CKAP4-201ENST00000378026 FA2HQ7L5A8 372 aa12.76□□□□□ -0.37
CKAP4-201ENST00000378026 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.76□□□□□ -0.37
CKAP4-201ENST00000378026 NDFIP1Q9BT67 221 aa12.76□□□□□ -0.37
CKAP4-201ENST00000378026 ARMS2P0C7Q2 107 aa12.75□□□□□ -0.37
CKAP4-201ENST00000378026 MYCNOSP40205 109 aa12.75□□□□□ -0.37
CKAP4-201ENST00000378026 ZNF747Q9BV97 191 aa12.75□□□□□ -0.37
CKAP4-201ENST00000378026 SSUH2Q9Y2M2 353 aa12.75□□□□□ -0.37
CKAP4-201ENST00000378026 FSTL3O95633 263 aa12.75□□□□□ -0.37
CKAP4-201ENST00000378026 LOXL1Q08397 574 aaPredicted RBP12.75□□□□□ -0.37
CKAP4-201ENST00000378026 KIR3DS1Q14943 382 aa12.75□□□□□ -0.37
CKAP4-201ENST00000378026 OR10AG1Q8NH19 301 aa12.75□□□□□ -0.37
CKAP4-201ENST00000378026 Q9H3A6 140 aa12.75□□□□□ -0.37
CKAP4-201ENST00000378026 C19orf71A6NCJ1 209 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms