RNA–Protein interactions for RNA: ENST00000377612.8

COMMD6-202, Transcript of COMM domain containing 6, humanhuman

TSL 5

Gene COMMD6, Length 580 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD6-202ENST00000377612 SFT2D2O95562 160 aa12.98□□□□□ -0.33
COMMD6-202ENST00000377612 RD3LP0DJH9 198 aa12.98□□□□□ -0.33
COMMD6-202ENST00000377612 AP3S2P59780 193 aa12.98□□□□□ -0.33
COMMD6-202ENST00000377612 ZNF90Q03938 601 aa12.98□□□□□ -0.33
COMMD6-202ENST00000377612 GAMTQ14353 236 aa12.98□□□□□ -0.33
COMMD6-202ENST00000377612 PSMG4Q5JS54 123 aa12.98□□□□□ -0.33
COMMD6-202ENST00000377612 ACTL10Q5JWF8 245 aa12.98□□□□□ -0.33
COMMD6-202ENST00000377612 GSG1LQ6UXU4 331 aa12.98□□□□□ -0.33
COMMD6-202ENST00000377612 TMEM217Q8N7C4 229 aa12.98□□□□□ -0.33
COMMD6-202ENST00000377612 RNF125Q96EQ8 232 aa12.98□□□□□ -0.33
COMMD6-202ENST00000377612 CACFD1Q9UGQ2 172 aa12.98□□□□□ -0.33
COMMD6-202ENST00000377612 IGKV1OR2-108A0A075B7D4 117 aa12.97□□□□□ -0.33
COMMD6-202ENST00000377612 HELTA6NFD8 242 aa12.97□□□□□ -0.33
COMMD6-202ENST00000377612 PRSS46E5RG02 174 aa12.97□□□□□ -0.33
COMMD6-202ENST00000377612 LY6G6CO95867 125 aa12.97□□□□□ -0.33
COMMD6-202ENST00000377612 IFNA4P05014 189 aa12.97□□□□□ -0.33
COMMD6-202ENST00000377612 NOXA1Q86UR1 476 aa12.97□□□□□ -0.33
COMMD6-202ENST00000377612 RBMY1A1P0DJD3 496 aaKnown RBP12.96□□□□□ -0.33
COMMD6-202ENST00000377612 RBMY1CP0DJD4 496 aa12.96□□□□□ -0.33
COMMD6-202ENST00000377612 S100A5P33763 92 aa12.96□□□□□ -0.33
COMMD6-202ENST00000377612 DEFB1P60022 68 aa12.96□□□□□ -0.33
COMMD6-202ENST00000377612 RBMY1FQ15415 496 aaKnown RBP12.96□□□□□ -0.33
COMMD6-202ENST00000377612 BAK1Q16611 211 aa12.96□□□□□ -0.33
COMMD6-202ENST00000377612 SIGLEC15Q6ZMC9 328 aa12.96□□□□□ -0.33
COMMD6-202ENST00000377612 CSNK1G2-AS1Q8NCQ2 148 aa12.96□□□□□ -0.33
COMMD6-202ENST00000377612 SDHCQ99643 169 aaPredicted RBP12.96□□□□□ -0.33
COMMD6-202ENST00000377612 SLC25A21Q9BQT8 299 aaPredicted RBP12.96□□□□□ -0.33
COMMD6-202ENST00000377612 NRN1Q9NPD7 142 aa12.96□□□□□ -0.33
COMMD6-202ENST00000377612 CLEC5AQ9NY25 188 aa12.96□□□□□ -0.33
COMMD6-202ENST00000377612 X6R8D5 127 aa12.96□□□□□ -0.33
COMMD6-202ENST00000377612 IGHV4-28A0A0C4DH34 117 aa12.95□□□□□ -0.34
COMMD6-202ENST00000377612 SPP1P10451 314 aa12.95□□□□□ -0.34
COMMD6-202ENST00000377612 SLC25A6P12236 298 aa12.95□□□□□ -0.34
COMMD6-202ENST00000377612 GPX4P36969 197 aaPredicted RBP12.95□□□□□ -0.34
COMMD6-202ENST00000377612 CENPSQ8N2Z9 138 aa12.95□□□□□ -0.34
COMMD6-202ENST00000377612 C11orf45Q8TAV5 145 aa12.95□□□□□ -0.34
COMMD6-202ENST00000377612 SLC35E1Q96K37 410 aa12.95□□□□□ -0.34
COMMD6-202ENST00000377612 RAB40CQ96S21 281 aa12.95□□□□□ -0.34
COMMD6-202ENST00000377612 PBDC1Q9BVG4 233 aa12.95□□□□□ -0.34
COMMD6-202ENST00000377612 MAGT1Q9H0U3 335 aa12.95□□□□□ -0.34
COMMD6-202ENST00000377612 FBXL17Q9UF56 701 aa12.95□□□□□ -0.34
COMMD6-202ENST00000377612 ZFP92A6NM28 416 aa12.94□□□□□ -0.34
COMMD6-202ENST00000377612 ZNF705EA8MWA4 302 aaPredicted RBP12.94□□□□□ -0.34
COMMD6-202ENST00000377612 BTCP35070 178 aa12.94□□□□□ -0.34
COMMD6-202ENST00000377612 EIF2B2P49770 351 aaKnown RBP12.94□□□□□ -0.34
COMMD6-202ENST00000377612 OR2F1Q13607 317 aa12.94□□□□□ -0.34
COMMD6-202ENST00000377612 GDF5OSQ5U4N7 250 aa12.94□□□□□ -0.34
COMMD6-202ENST00000377612 GGNBP1Q5YKI7 109 aa12.94□□□□□ -0.34
COMMD6-202ENST00000377612 MORN3Q6PF18 240 aaPredicted RBP12.94□□□□□ -0.34
COMMD6-202ENST00000377612 DEDD2Q8WXF8 326 aa12.94□□□□□ -0.34
COMMD6-202ENST00000377612 WDR12Q9GZL7 423 aaKnown RBP12.94□□□□□ -0.34
COMMD6-202ENST00000377612 KLK5Q9Y337 293 aaPredicted RBP12.94□□□□□ -0.34
COMMD6-202ENST00000377612 ZNF701M0R085 212 aaPredicted RBP12.93□□□□□ -0.34
COMMD6-202ENST00000377612 SOCS3O14543 225 aa12.93□□□□□ -0.34
COMMD6-202ENST00000377612 HOXB5P09067 269 aa12.93□□□□□ -0.34
COMMD6-202ENST00000377612 OR8G2PQ6IF36 304 aa12.93□□□□□ -0.34
COMMD6-202ENST00000377612 THAP8Q8NA92 274 aa12.93□□□□□ -0.34
COMMD6-202ENST00000377612 FLVCR2Q9UPI3 526 aa12.93□□□□□ -0.34
COMMD6-202ENST00000377612 TMED3Q9Y3Q3 217 aa12.93□□□□□ -0.34
COMMD6-202ENST00000377612 H3BP45 60 aa12.92□□□□□ -0.34
COMMD6-202ENST00000377612 ADAP1O75689 374 aa12.92□□□□□ -0.34
COMMD6-202ENST00000377612 AP2S1P53680 142 aaPredicted RBP12.92□□□□□ -0.34
COMMD6-202ENST00000377612 ATP5IP56385 69 aaPredicted RBP12.92□□□□□ -0.34
COMMD6-202ENST00000377612 LYZP61626 148 aa12.92□□□□□ -0.34
COMMD6-202ENST00000377612 RPP25LQ8N5L8 163 aaKnown RBP12.92□□□□□ -0.34
COMMD6-202ENST00000377612 ELOA3CA0A087WX78 387 aaPredicted RBP12.91□□□□□ -0.34
COMMD6-202ENST00000377612 C9orf170A2RU37 121 aa12.91□□□□□ -0.34
COMMD6-202ENST00000377612 H3BMM0 161 aa12.91□□□□□ -0.34
COMMD6-202ENST00000377612 WRBO00258 174 aa12.91□□□□□ -0.34
COMMD6-202ENST00000377612 SYNGR2O43760 224 aa12.91□□□□□ -0.34
COMMD6-202ENST00000377612 DEDDO75618 318 aa12.91□□□□□ -0.34
COMMD6-202ENST00000377612 NDUFB6O95139 128 aa12.91□□□□□ -0.34
COMMD6-202ENST00000377612 TMEM41BQ5BJD5 291 aa12.91□□□□□ -0.34
COMMD6-202ENST00000377612 SPANXN2Q5MJ10 180 aa12.91□□□□□ -0.34
COMMD6-202ENST00000377612 TMEM182Q6ZP80 229 aaPredicted RBP12.91□□□□□ -0.34
COMMD6-202ENST00000377612 TRGV9Q99603 122 aa12.91□□□□□ -0.34
COMMD6-202ENST00000377612 SEPSECSQ9HD40 501 aaKnown RBP12.91□□□□□ -0.34
COMMD6-202ENST00000377612 PAIP2BQ9ULR5 123 aaKnown RBP12.91□□□□□ -0.34
COMMD6-202ENST00000377612 HLA-DRB4P13762 266 aa12.9□□□□□ -0.34
COMMD6-202ENST00000377612 UBE2MP61081 183 aaKnown RBP12.9□□□□□ -0.34
COMMD6-202ENST00000377612 C17orf77Q96MU5 243 aa12.9□□□□□ -0.34
COMMD6-202ENST00000377612 MFFQ9GZY8 342 aa12.9□□□□□ -0.34
COMMD6-202ENST00000377612 CELA1Q9UNI1 258 aa12.9□□□□□ -0.34
COMMD6-202ENST00000377612 HLA-DRB4X5D2U9 266 aa12.9□□□□□ -0.34
COMMD6-202ENST00000377612 HECTD4Q9Y4D8 3996 aa12.9□□□□□ -0.34
COMMD6-202ENST00000377612 DNAH2Q9P225 4427 aa12.89□□□□□ -0.35
COMMD6-202ENST00000377612 PIGBOS1A0A0B4J2F0 54 aa12.89□□□□□ -0.35
COMMD6-202ENST00000377612 MED6O75586 246 aa12.89□□□□□ -0.35
COMMD6-202ENST00000377612 MIFP14174 115 aa12.89□□□□□ -0.35
COMMD6-202ENST00000377612 SNRPD3P62318 126 aaKnown RBP12.89□□□□□ -0.35
COMMD6-202ENST00000377612 RAB11AP62491 216 aa12.89□□□□□ -0.35
COMMD6-202ENST00000377612 ACOT7LQ6ZUV0 252 aa12.89□□□□□ -0.35
COMMD6-202ENST00000377612 XCL2Q9UBD3 114 aa12.89□□□□□ -0.35
COMMD6-202ENST00000377612 LINC00854A0A1B0GVQ3 168 aa12.88□□□□□ -0.35
COMMD6-202ENST00000377612 CCNKO75909 580 aa12.88□□□□□ -0.35
COMMD6-202ENST00000377612 GATA2P23769 480 aaPredicted RBP12.88□□□□□ -0.35
COMMD6-202ENST00000377612 NUP62P37198 522 aaPredicted RBP12.88□□□□□ -0.35
COMMD6-202ENST00000377612 NKX2-1P43699 371 aaPredicted RBP12.88□□□□□ -0.35
COMMD6-202ENST00000377612 POLR2GP62487 172 aaKnown RBP eCLIP12.88□□□□□ -0.35
COMMD6-202ENST00000377612 SPANXN5Q5MJ07 72 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms