RNA–Protein interactions for RNA: ENST00000377453.8

CLN5-201, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLN5, Length 2,629 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-201ENST00000377453 FAM57AQ8TBR7 257 aa16.34■□□□□ 0.21
CLN5-201ENST00000377453 LYNX1G3V0Z9 82 aa16.34■□□□□ 0.21
CLN5-201ENST00000377453 KLK10O43240 276 aa16.34■□□□□ 0.21
CLN5-201ENST00000377453 LYNX1P0DP58 116 aa16.34■□□□□ 0.21
CLN5-201ENST00000377453 LOXP28300 417 aaPredicted RBP16.34■□□□□ 0.21
CLN5-201ENST00000377453 TBR1Q16650 682 aa16.34■□□□□ 0.21
CLN5-201ENST00000377453 LPAR2Q9HBW0 351 aa16.34■□□□□ 0.21
CLN5-201ENST00000377453 ST6GALNAC6Q969X2 333 aa16.33■□□□□ 0.21
CLN5-201ENST00000377453 RNF2Q99496 336 aa16.33■□□□□ 0.21
CLN5-201ENST00000377453 TNFRSF19Q9NS68 423 aa16.33■□□□□ 0.21
CLN5-201ENST00000377453 C16orf97H3BN30 126 aa16.33■□□□□ 0.2
CLN5-201ENST00000377453 NDUFB3O43676 98 aa16.33■□□□□ 0.2
CLN5-201ENST00000377453 CTRLP40313 264 aa16.33■□□□□ 0.2
CLN5-201ENST00000377453 CLEC7AQ9BXN2 247 aa16.33■□□□□ 0.2
CLN5-201ENST00000377453 SSUH2Q9Y2M2 353 aa16.33■□□□□ 0.2
CLN5-201ENST00000377453 WASHC3Q9Y3C0 194 aa16.33■□□□□ 0.2
CLN5-201ENST00000377453 C3orf36Q3SXR2 165 aa16.32■□□□□ 0.2
CLN5-201ENST00000377453 RNASEKQ6P5S7 137 aaKnown RBP16.32■□□□□ 0.2
CLN5-201ENST00000377453 IGFL3Q6UXB1 125 aa16.32■□□□□ 0.2
CLN5-201ENST00000377453 NUP37Q8NFH4 326 aa16.32■□□□□ 0.2
CLN5-201ENST00000377453 OR2D3Q8NGH3 330 aa16.32■□□□□ 0.2
CLN5-201ENST00000377453 FOXA3P55318 350 aaPredicted RBP16.32■□□□□ 0.2
CLN5-201ENST00000377453 MEF2CQ06413 473 aaPredicted RBP16.32■□□□□ 0.2
CLN5-201ENST00000377453 TRAV8-1A0A0A6YYK1 113 aa16.32■□□□□ 0.2
CLN5-201ENST00000377453 BPIFB3P59826 476 aa16.32■□□□□ 0.2
CLN5-201ENST00000377453 Q6ZVH6 145 aa16.32■□□□□ 0.2
CLN5-201ENST00000377453 SPATA12Q7Z6I5 190 aa16.32■□□□□ 0.2
CLN5-201ENST00000377453 PDPNQ86YL7 162 aa16.32■□□□□ 0.2
CLN5-201ENST00000377453 OR1L4Q8NGR5 311 aa16.32■□□□□ 0.2
CLN5-201ENST00000377453 C7orf69Q9H7B7 122 aa16.32■□□□□ 0.2
CLN5-201ENST00000377453 LRBAP50851 2863 aa16.31■□□□□ 0.2
CLN5-201ENST00000377453 IGLC7A0M8Q6 106 aa16.31■□□□□ 0.2
CLN5-201ENST00000377453 UBE2G1P62253 170 aa16.31■□□□□ 0.2
CLN5-201ENST00000377453 CLEC5AQ9NY25 188 aa16.31■□□□□ 0.2
CLN5-201ENST00000377453 HYPMO75409 117 aa16.31■□□□□ 0.2
CLN5-201ENST00000377453 RPL19P84098 196 aaKnown RBP16.31■□□□□ 0.2
CLN5-201ENST00000377453 EBLN2Q6P2I7 272 aa16.31■□□□□ 0.2
CLN5-201ENST00000377453 GRAMD2BQ96HH9 432 aa16.31■□□□□ 0.2
CLN5-201ENST00000377453 EPDR1Q9UM22 224 aa16.31■□□□□ 0.2
CLN5-201ENST00000377453 ZNF137PP52743 207 aa16.3■□□□□ 0.2
CLN5-201ENST00000377453 Q56UQ5 140 aa16.3■□□□□ 0.2
CLN5-201ENST00000377453 LRRC10Q5BKY1 277 aa16.3■□□□□ 0.2
CLN5-201ENST00000377453 OR4B1Q8NGF8 309 aa16.3■□□□□ 0.2
CLN5-201ENST00000377453 DCHS2Q6V1P9 2916 aa16.3■□□□□ 0.2
CLN5-201ENST00000377453 MALRD1Q5VYJ5 2156 aa16.3■□□□□ 0.2
CLN5-201ENST00000377453 PRRX1P54821 245 aa16.3■□□□□ 0.2
CLN5-201ENST00000377453 PRR30Q53SZ7 412 aaPredicted RBP16.3■□□□□ 0.2
CLN5-201ENST00000377453 MYCNOSP40205 109 aa16.29■□□□□ 0.2
CLN5-201ENST00000377453 DLX6P56179 175 aa16.29■□□□□ 0.2
CLN5-201ENST00000377453 Q6ZN92 141 aa16.29■□□□□ 0.2
CLN5-201ENST00000377453 THAP8Q8NA92 274 aa16.29■□□□□ 0.2
CLN5-201ENST00000377453 SVEP1Q4LDE5 3571 aa16.29■□□□□ 0.2
CLN5-201ENST00000377453 ATP5IP56385 69 aaPredicted RBP16.29■□□□□ 0.2
CLN5-201ENST00000377453 VMA21Q3ZAQ7 101 aa16.29■□□□□ 0.2
CLN5-201ENST00000377453 C11orf42Q8N5U0 333 aa16.29■□□□□ 0.2
CLN5-201ENST00000377453 VSTM2AQ8TAG5 236 aa16.29■□□□□ 0.2
CLN5-201ENST00000377453 BORCS7Q96B45 105 aa16.29■□□□□ 0.2
CLN5-201ENST00000377453 TMEM186Q96B77 213 aa16.29■□□□□ 0.2
CLN5-201ENST00000377453 TXN2Q99757 166 aa16.29■□□□□ 0.2
CLN5-201ENST00000377453 DLEU1O43261 78 aa16.28■□□□□ 0.2
CLN5-201ENST00000377453 HSBP1O75506 76 aa16.28■□□□□ 0.2
CLN5-201ENST00000377453 SUB1P53999 127 aaKnown RBP eCLIP16.28■□□□□ 0.2
CLN5-201ENST00000377453 TMEM30BQ3MIR4 351 aa16.28■□□□□ 0.2
CLN5-201ENST00000377453 STPG4Q8N801 248 aa16.28■□□□□ 0.2
CLN5-201ENST00000377453 PGLYRP4Q96LB8 373 aa16.28■□□□□ 0.2
CLN5-201ENST00000377453 M0R2Z0 102 aa16.28■□□□□ 0.2
CLN5-201ENST00000377453 CRYABP02511 175 aaKnown RBP16.28■□□□□ 0.2
CLN5-201ENST00000377453 NBEAP1P0C6P0 100 aa16.28■□□□□ 0.2
CLN5-201ENST00000377453 IGLC2P0DOY2 106 aa16.28■□□□□ 0.2
CLN5-201ENST00000377453 IGLC3P0DOY3 106 aa16.28■□□□□ 0.2
CLN5-201ENST00000377453 IGHV1-8P0DP01 117 aa16.28■□□□□ 0.2
CLN5-201ENST00000377453 URB1-AS1Q96HZ7 61 aa16.28■□□□□ 0.2
CLN5-201ENST00000377453 ALKBH7Q9BT30 221 aaPredicted RBP16.28■□□□□ 0.2
CLN5-201ENST00000377453 DYNLRB1Q9NP97 96 aa16.28■□□□□ 0.2
CLN5-201ENST00000377453 ZNF835Q9Y2P0 537 aa16.28■□□□□ 0.2
CLN5-201ENST00000377453 COX7A1P24310 79 aa16.27■□□□□ 0.2
CLN5-201ENST00000377453 LINC00173Q6ZV60 143 aa16.27■□□□□ 0.2
CLN5-201ENST00000377453 GTSF1Q8WW33 167 aa16.27■□□□□ 0.2
CLN5-201ENST00000377453 M0QZK8 103 aa16.27■□□□□ 0.19
CLN5-201ENST00000377453 TNFRSF13BO14836 293 aaPredicted RBP16.26■□□□□ 0.19
CLN5-201ENST00000377453 TMEM155Q4W5P6 130 aa16.26■□□□□ 0.19
CLN5-201ENST00000377453 FAM231DQ6ZW35 169 aa16.26■□□□□ 0.19
CLN5-201ENST00000377453 LYZP61626 148 aa16.26■□□□□ 0.19
CLN5-201ENST00000377453 EXOC3-AS1Q8N2X6 119 aa16.26■□□□□ 0.19
CLN5-201ENST00000377453 RNASE6Q93091 150 aaKnown RBP16.26■□□□□ 0.19
CLN5-201ENST00000377453 PERPQ96FX8 193 aa16.26■□□□□ 0.19
CLN5-201ENST00000377453 ABHD17AQ96GS6 310 aa16.26■□□□□ 0.19
CLN5-201ENST00000377453 MCRIP2Q9BUT9 160 aaKnown RBP16.26■□□□□ 0.19
CLN5-201ENST00000377453 S4R3C0 116 aa16.26■□□□□ 0.19
CLN5-201ENST00000377453 FAM181BA6NEQ2 426 aa16.25■□□□□ 0.19
CLN5-201ENST00000377453 INS-IGF2F8WCM5 200 aa16.25■□□□□ 0.19
CLN5-201ENST00000377453 RPL27AP46776 148 aaKnown RBP16.25■□□□□ 0.19
CLN5-201ENST00000377453 COX19Q49B96 90 aa16.25■□□□□ 0.19
CLN5-201ENST00000377453 CIARTQ8N365 385 aaPredicted RBP16.25■□□□□ 0.19
CLN5-201ENST00000377453 Q9H3A6 140 aa16.25■□□□□ 0.19
CLN5-201ENST00000377453 FBXL15Q9H469 300 aa16.25■□□□□ 0.19
CLN5-201ENST00000377453 GOLT1BQ9Y3E0 138 aa16.25■□□□□ 0.19
CLN5-201ENST00000377453 E7EQL1 145 aa16.25■□□□□ 0.19
CLN5-201ENST00000377453 OR4A5Q8NH83 315 aa16.25■□□□□ 0.19
CLN5-201ENST00000377453 HNRNPA3P51991 378 aaKnown RBP16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms