RNA–Protein interactions for RNA: ENST00000377342.9

CBWD3-202, Transcript of COBW domain containing 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CBWD3, Length 1,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-202ENST00000377342 BOLA1Q9Y3E2 137 aa16.3■□□□□ 0.2
CBWD3-202ENST00000377342 PUS1Q9Y606 427 aaKnown RBP eCLIP16.3■□□□□ 0.2
CBWD3-202ENST00000377342 PRR20EP86478 221 aa16.29■□□□□ 0.2
CBWD3-202ENST00000377342 PRR20CP86479 221 aa16.29■□□□□ 0.2
CBWD3-202ENST00000377342 PRR20DP86480 221 aa16.29■□□□□ 0.2
CBWD3-202ENST00000377342 PRR20BP86481 221 aa16.29■□□□□ 0.2
CBWD3-202ENST00000377342 PRR20AP86496 221 aa16.29■□□□□ 0.2
CBWD3-202ENST00000377342 TOMM20LQ6UXN7 152 aa16.29■□□□□ 0.2
CBWD3-202ENST00000377342 GPHB5Q86YW7 130 aa16.29■□□□□ 0.2
CBWD3-202ENST00000377342 HSD17B11Q8NBQ5 300 aa16.29■□□□□ 0.2
CBWD3-202ENST00000377342 TMEM190Q8WZ59 177 aa16.29■□□□□ 0.2
CBWD3-202ENST00000377342 ARV1Q9H2C2 271 aa16.29■□□□□ 0.2
CBWD3-202ENST00000377342 IGHV3OR16-8A0A075B7F1 116 aa16.28■□□□□ 0.2
CBWD3-202ENST00000377342 BORCS7-ASMTA0A0B4J1R7 106 aa16.28■□□□□ 0.2
CBWD3-202ENST00000377342 NDUFA4O00483 81 aa16.28■□□□□ 0.2
CBWD3-202ENST00000377342 JTBO76095 146 aa16.28■□□□□ 0.2
CBWD3-202ENST00000377342 TSPAN15O95858 294 aa16.28■□□□□ 0.2
CBWD3-202ENST00000377342 RD3LP0DJH9 198 aa16.28■□□□□ 0.2
CBWD3-202ENST00000377342 MYCNOSP40205 109 aa16.28■□□□□ 0.2
CBWD3-202ENST00000377342 KLF5Q13887 457 aaPredicted RBP16.28■□□□□ 0.2
CBWD3-202ENST00000377342 MIC13Q5XKP0 118 aa16.28■□□□□ 0.2
CBWD3-202ENST00000377342 BPIFCQ8NFQ6 507 aa16.28■□□□□ 0.2
CBWD3-202ENST00000377342 ZNF471Q9BX82 626 aaPredicted RBP16.28■□□□□ 0.2
CBWD3-202ENST00000377342 LINC00869P0C866 280 aa16.27■□□□□ 0.2
CBWD3-202ENST00000377342 SYNJ2BPP57105 145 aa16.27■□□□□ 0.2
CBWD3-202ENST00000377342 STPG3Q8N7X2 389 aa16.27■□□□□ 0.2
CBWD3-202ENST00000377342 SCGB1C1Q8TD33 95 aa16.27■□□□□ 0.2
CBWD3-202ENST00000377342 DLX4Q92988 240 aaPredicted RBP16.27■□□□□ 0.2
CBWD3-202ENST00000377342 SH3BGRL3Q9H299 93 aa16.27■□□□□ 0.2
CBWD3-202ENST00000377342 ATP6V0CP27449 155 aa16.27■□□□□ 0.19
CBWD3-202ENST00000377342 SELENOTP62341 195 aa16.27■□□□□ 0.19
CBWD3-202ENST00000377342 RAB31Q13636 194 aa16.27■□□□□ 0.19
CBWD3-202ENST00000377342 USF2Q15853 346 aaPredicted RBP16.27■□□□□ 0.19
CBWD3-202ENST00000377342 REC114Q7Z4M0 266 aa16.27■□□□□ 0.19
CBWD3-202ENST00000377342 C1QL4Q86Z23 238 aa16.27■□□□□ 0.19
CBWD3-202ENST00000377342 OR4F17Q8NGA8 305 aa16.27■□□□□ 0.19
CBWD3-202ENST00000377342 OR51G1Q8NGK1 321 aa16.27■□□□□ 0.19
CBWD3-202ENST00000377342 PPP1R14BQ96C90 147 aa16.27■□□□□ 0.19
CBWD3-202ENST00000377342 OR4F4Q96R69 305 aa16.27■□□□□ 0.19
CBWD3-202ENST00000377342 PXMP4Q9Y6I8 212 aa16.27■□□□□ 0.19
CBWD3-202ENST00000377342 WI2-2373I1.2A0A1W2PRP0 233 aa16.26■□□□□ 0.19
CBWD3-202ENST00000377342 IL4P05112 153 aa16.26■□□□□ 0.19
CBWD3-202ENST00000377342 FABP1P07148 127 aa16.26■□□□□ 0.19
CBWD3-202ENST00000377342 RPL29P47914 159 aaKnown RBP16.26■□□□□ 0.19
CBWD3-202ENST00000377342 STOML3Q8TAV4 291 aa16.26■□□□□ 0.19
CBWD3-202ENST00000377342 Q8WTZ3 238 aa16.26■□□□□ 0.19
CBWD3-202ENST00000377342 GINS3Q9BRX5 216 aa16.26■□□□□ 0.19
CBWD3-202ENST00000377342 A8MWP6 167 aa16.25■□□□□ 0.19
CBWD3-202ENST00000377342 LINC00482Q8N8I6 264 aa16.25■□□□□ 0.19
CBWD3-202ENST00000377342 SPATA3Q8NHX4 192 aa16.25■□□□□ 0.19
CBWD3-202ENST00000377342 RNF125Q96EQ8 232 aa16.25■□□□□ 0.19
CBWD3-202ENST00000377342 SLC39A9Q9NUM3 307 aa16.25■□□□□ 0.19
CBWD3-202ENST00000377342 TIMM9Q9Y5J7 89 aa16.25■□□□□ 0.19
CBWD3-202ENST00000377342 LGALS9O00182 355 aa16.24■□□□□ 0.19
CBWD3-202ENST00000377342 YIF1AO95070 293 aa16.24■□□□□ 0.19
CBWD3-202ENST00000377342 EDN2P20800 178 aa16.24■□□□□ 0.19
CBWD3-202ENST00000377342 LYZP61626 148 aa16.24■□□□□ 0.19
CBWD3-202ENST00000377342 PF4P02776 101 aa16.24■□□□□ 0.19
CBWD3-202ENST00000377342 B2MP61769 119 aa16.24■□□□□ 0.19
CBWD3-202ENST00000377342 FAM106AQ4KMX7 169 aa16.24■□□□□ 0.19
CBWD3-202ENST00000377342 PSMG3Q9BT73 122 aaPredicted RBP16.24■□□□□ 0.19
CBWD3-202ENST00000377342 C20orf24Q9BUV8 137 aa16.24■□□□□ 0.19
CBWD3-202ENST00000377342 ZNF320A2RRD8 509 aa16.23■□□□□ 0.19
CBWD3-202ENST00000377342 TMEM213A2RRL7 107 aa16.23■□□□□ 0.19
CBWD3-202ENST00000377342 C17orf112F2Z3M2 114 aa16.23■□□□□ 0.19
CBWD3-202ENST00000377342 ZNF207O43670 478 aaKnown RBP16.23■□□□□ 0.19
CBWD3-202ENST00000377342 PLP1P60201 277 aa16.23■□□□□ 0.19
CBWD3-202ENST00000377342 SLC51BQ86UW2 128 aa16.23■□□□□ 0.19
CBWD3-202ENST00000377342 ZNF709Q8N972 641 aa16.23■□□□□ 0.19
CBWD3-202ENST00000377342 KCNIP2Q9NS61 270 aa16.23■□□□□ 0.19
CBWD3-202ENST00000377342 M0QZ24 198 aa16.22■□□□□ 0.19
CBWD3-202ENST00000377342 GCSAMLQ5JQS6 135 aa16.22■□□□□ 0.19
CBWD3-202ENST00000377342 PBDC1Q9BVG4 233 aa16.22■□□□□ 0.19
CBWD3-202ENST00000377342 DOK5Q9P104 306 aa16.22■□□□□ 0.19
CBWD3-202ENST00000377342 CFDP00746 253 aaPredicted RBP16.21■□□□□ 0.19
CBWD3-202ENST00000377342 SPP1P10451 314 aa16.21■□□□□ 0.19
CBWD3-202ENST00000377342 TPT1P13693 172 aaKnown RBP16.21■□□□□ 0.19
CBWD3-202ENST00000377342 TM4SF20Q53R12 229 aa16.21■□□□□ 0.19
CBWD3-202ENST00000377342 PATE2Q6UY27 113 aa16.21■□□□□ 0.19
CBWD3-202ENST00000377342 BAP18Q8IXM2 172 aa16.21■□□□□ 0.19
CBWD3-202ENST00000377342 OR9G4Q8NGQ1 327 aa16.21■□□□□ 0.19
CBWD3-202ENST00000377342 OR2G3Q8NGZ4 309 aa16.21■□□□□ 0.19
CBWD3-202ENST00000377342 ST8SIA2Q92186 375 aa16.21■□□□□ 0.19
CBWD3-202ENST00000377342 GNPNAT1Q96EK6 184 aaPredicted RBP16.21■□□□□ 0.19
CBWD3-202ENST00000377342 SLC25A32Q9H2D1 315 aa16.21■□□□□ 0.19
CBWD3-202ENST00000377342 DAZ1Q9NQZ3 744 aaKnown RBP16.21■□□□□ 0.19
CBWD3-202ENST00000377342 PKD1L1Q8TDX9 2849 aa16.21■□□□□ 0.19
CBWD3-202ENST00000377342 ORM2P19652 201 aa16.21■□□□□ 0.18
CBWD3-202ENST00000377342 ELLP55199 621 aaPredicted RBP16.21■□□□□ 0.18
CBWD3-202ENST00000377342 IL34Q6ZMJ4 242 aa16.21■□□□□ 0.18
CBWD3-202ENST00000377342 OR1B1Q8NGR6 318 aa16.21■□□□□ 0.18
CBWD3-202ENST00000377342 TMEM37Q8WXS4 190 aa16.21■□□□□ 0.18
CBWD3-202ENST00000377342 OVOL1O14753 267 aa16.2■□□□□ 0.18
CBWD3-202ENST00000377342 FFAR4Q5NUL3 377 aa16.2■□□□□ 0.18
CBWD3-202ENST00000377342 MRPL27Q9P0M9 148 aaKnown RBP16.2■□□□□ 0.18
CBWD3-202ENST00000377342 UFC1Q9Y3C8 167 aa16.2■□□□□ 0.18
CBWD3-202ENST00000377342 C4BPBP20851 252 aa16.19■□□□□ 0.18
CBWD3-202ENST00000377342 ADAMTSL5Q6ZMM2 481 aa16.19■□□□□ 0.18
CBWD3-202ENST00000377342 UHRF2Q96PU4 802 aa16.19■□□□□ 0.18
CBWD3-202ENST00000377342 VSIRQ9H7M9 311 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms