RNA–Protein interactions for RNA: ENST00000377298.8

CLSTN1-202, Transcript of calsyntenin 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLSTN1, Length 5,221 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-202ENST00000377298 PKDREJQ9NTG1 2253 aa14.64□□□□□ -0.07
CLSTN1-202ENST00000377298 SRD5A1P18405 259 aa14.64□□□□□ -0.07
CLSTN1-202ENST00000377298 CMC4P56277 68 aaPredicted RBP14.64□□□□□ -0.07
CLSTN1-202ENST00000377298 COPS9Q8WXC6 57 aa14.64□□□□□ -0.07
CLSTN1-202ENST00000377298 TRGV9Q99603 122 aa14.64□□□□□ -0.07
CLSTN1-202ENST00000377298 PRSS2P07478 247 aa14.63□□□□□ -0.07
CLSTN1-202ENST00000377298 LMO1P25800 156 aa14.63□□□□□ -0.07
CLSTN1-202ENST00000377298 SIGLEC15Q6ZMC9 328 aa14.63□□□□□ -0.07
CLSTN1-202ENST00000377298 CD5P06127 495 aa14.63□□□□□ -0.07
CLSTN1-202ENST00000377298 ZNF581Q9P0T4 197 aa14.63□□□□□ -0.07
CLSTN1-202ENST00000377298 F11RQ9Y624 299 aaKnown RBP14.63□□□□□ -0.07
CLSTN1-202ENST00000377298 TRAV3A0A0B4J244 114 aa14.63□□□□□ -0.07
CLSTN1-202ENST00000377298 UBE2CO00762 179 aa14.63□□□□□ -0.07
CLSTN1-202ENST00000377298 STAG3L2P0CL84 134 aa14.63□□□□□ -0.07
CLSTN1-202ENST00000377298 ZNF407Q9C0G0 2248 aa14.62□□□□□ -0.07
CLSTN1-202ENST00000377298 HIGD1CA8MV81 97 aa14.62□□□□□ -0.07
CLSTN1-202ENST00000377298 PSG1P11464 419 aa14.62□□□□□ -0.07
CLSTN1-202ENST00000377298 TCF15Q12870 199 aa14.62□□□□□ -0.07
CLSTN1-202ENST00000377298 GCSAMLQ5JQS6 135 aa14.62□□□□□ -0.07
CLSTN1-202ENST00000377298 OSTCQ9NRP0 149 aa14.62□□□□□ -0.07
CLSTN1-202ENST00000377298 TRBV7-1A0A0A6YYK4 115 aa14.62□□□□□ -0.07
CLSTN1-202ENST00000377298 SAP30O75446 220 aa14.62□□□□□ -0.07
CLSTN1-202ENST00000377298 WISP1O95388 367 aa14.62□□□□□ -0.07
CLSTN1-202ENST00000377298 STAG3L3P0CL85 134 aa14.62□□□□□ -0.07
CLSTN1-202ENST00000377298 USMG5Q96IX5 58 aa14.62□□□□□ -0.07
CLSTN1-202ENST00000377298 FAM215AQ9Y5M1 114 aa14.62□□□□□ -0.07
CLSTN1-202ENST00000377298 FANCMQ8IYD8 2048 aa14.62□□□□□ -0.07
CLSTN1-202ENST00000377298 CIDEAO60543 219 aa14.62□□□□□ -0.07
CLSTN1-202ENST00000377298 CD7P09564 240 aa14.62□□□□□ -0.07
CLSTN1-202ENST00000377298 COX6CP09669 75 aa14.62□□□□□ -0.07
CLSTN1-202ENST00000377298 ORMDL3Q8N138 153 aa14.62□□□□□ -0.07
CLSTN1-202ENST00000377298 GLMPQ8WWB7 406 aa14.62□□□□□ -0.07
CLSTN1-202ENST00000377298 IGF2-ASQ6U949 168 aa14.61□□□□□ -0.07
CLSTN1-202ENST00000377298 C12orf54Q6X4T0 127 aa14.61□□□□□ -0.07
CLSTN1-202ENST00000377298 ERASQ7Z444 233 aa14.61□□□□□ -0.07
CLSTN1-202ENST00000377298 C5orf24Q7Z6I8 188 aa14.61□□□□□ -0.07
CLSTN1-202ENST00000377298 NCOR1P1Q9H4R4 102 aa14.61□□□□□ -0.07
CLSTN1-202ENST00000377298 TTC28Q96AY4 2481 aa14.61□□□□□ -0.07
CLSTN1-202ENST00000377298 MUC21A0A0G2JKD1 596 aa14.61□□□□□ -0.07
CLSTN1-202ENST00000377298 MUC21A0A140T8X8 626 aa14.61□□□□□ -0.07
CLSTN1-202ENST00000377298 K7ERU9 68 aa14.61□□□□□ -0.07
CLSTN1-202ENST00000377298 SOD3P08294 240 aa14.61□□□□□ -0.07
CLSTN1-202ENST00000377298 MUC21Q5SSG8 566 aa14.61□□□□□ -0.07
CLSTN1-202ENST00000377298 ATP5LO75964 103 aa14.61□□□□□ -0.07
CLSTN1-202ENST00000377298 IGLV1-44P01699 117 aa14.61□□□□□ -0.07
CLSTN1-202ENST00000377298 MSMBP08118 114 aa14.61□□□□□ -0.07
CLSTN1-202ENST00000377298 SAA4P35542 130 aa14.61□□□□□ -0.07
CLSTN1-202ENST00000377298 SLC25A34Q6PIV7 304 aa14.61□□□□□ -0.07
CLSTN1-202ENST00000377298 NUP210Q8TEM1 1887 aaPredicted RBP14.61□□□□□ -0.07
CLSTN1-202ENST00000377298 LOC102724200A0A096LPH7 203 aaPredicted RBP14.61□□□□□ -0.07
CLSTN1-202ENST00000377298 C7orf71A4D174 169 aa14.61□□□□□ -0.07
CLSTN1-202ENST00000377298 LINC00469Q8N7U9 141 aa14.61□□□□□ -0.07
CLSTN1-202ENST00000377298 C3orf56Q8N813 242 aa14.61□□□□□ -0.07
CLSTN1-202ENST00000377298 BEND2Q8NDZ0 799 aa14.61□□□□□ -0.07
CLSTN1-202ENST00000377298 SRSF8Q9BRL6 282 aaKnown RBP14.61□□□□□ -0.07
CLSTN1-202ENST00000377298 PHF3Q92576 2039 aaKnown RBP14.61□□□□□ -0.07
CLSTN1-202ENST00000377298 COLCA2A8K830 154 aa14.6□□□□□ -0.07
CLSTN1-202ENST00000377298 DEFB121Q5J5C9 76 aa14.6□□□□□ -0.07
CLSTN1-202ENST00000377298 ZNF524Q96C55 264 aa14.6□□□□□ -0.07
CLSTN1-202ENST00000377298 TEX38Q6PEX7 206 aa14.6□□□□□ -0.07
CLSTN1-202ENST00000377298 ZNF414Q96IQ9 312 aa14.6□□□□□ -0.07
CLSTN1-202ENST00000377298 RSPO3Q9BXY4 272 aaPredicted RBP14.6□□□□□ -0.07
CLSTN1-202ENST00000377298 CYTL1Q9NRR1 136 aa14.6□□□□□ -0.07
CLSTN1-202ENST00000377298 APOHP02749 345 aaPredicted RBP14.6□□□□□ -0.07
CLSTN1-202ENST00000377298 Q6ZR03 302 aa14.59□□□□□ -0.07
CLSTN1-202ENST00000377298 RNASE7Q9H1E1 156 aaKnown RBP14.59□□□□□ -0.07
CLSTN1-202ENST00000377298 UBE2E1P51965 193 aa14.59□□□□□ -0.07
CLSTN1-202ENST00000377298 SLC25A39Q9BZJ4 359 aaPredicted RBP14.59□□□□□ -0.07
CLSTN1-202ENST00000377298 VSIRQ9H7M9 311 aa14.59□□□□□ -0.07
CLSTN1-202ENST00000377298 H3BVH4 76 aa14.59□□□□□ -0.07
CLSTN1-202ENST00000377298 HS3ST6Q96QI5 342 aa14.59□□□□□ -0.07
CLSTN1-202ENST00000377298 TRAV1-1A0A0B4J248 108 aa14.58□□□□□ -0.08
CLSTN1-202ENST00000377298 TRAV5A0A0B4J249 113 aa14.58□□□□□ -0.08
CLSTN1-202ENST00000377298 HIST1H4GQ99525 98 aa14.58□□□□□ -0.08
CLSTN1-202ENST00000377298 USF3Q68DE3 2245 aa14.58□□□□□ -0.08
CLSTN1-202ENST00000377298 TRGV11A0A075B6L2 103 aa14.58□□□□□ -0.08
CLSTN1-202ENST00000377298 RNF223E7ERA6 249 aa14.58□□□□□ -0.08
CLSTN1-202ENST00000377298 IMMP2LQ96T52 175 aa14.58□□□□□ -0.08
CLSTN1-202ENST00000377298 FAM223BA6NKX1 122 aa14.58□□□□□ -0.08
CLSTN1-202ENST00000377298 PMS2P5A8MQ11 134 aa14.58□□□□□ -0.08
CLSTN1-202ENST00000377298 H7C2G1 150 aa14.58□□□□□ -0.08
CLSTN1-202ENST00000377298 TDGF1P13385 188 aa14.58□□□□□ -0.08
CLSTN1-202ENST00000377298 PSMG4Q5JS54 123 aa14.58□□□□□ -0.08
CLSTN1-202ENST00000377298 FAM223AQ8IWN6 122 aa14.58□□□□□ -0.08
CLSTN1-202ENST00000377298 MGST2Q99735 147 aa14.58□□□□□ -0.08
CLSTN1-202ENST00000377298 CACNG7P62955 275 aa14.57□□□□□ -0.08
CLSTN1-202ENST00000377298 KLF17Q5JT82 389 aaPredicted RBP14.57□□□□□ -0.08
CLSTN1-202ENST00000377298 OR11H12B2RN74 326 aa14.57□□□□□ -0.08
CLSTN1-202ENST00000377298 OR11H1Q8NG94 326 aa14.57□□□□□ -0.08
CLSTN1-202ENST00000377298 OR11H2Q8NH07 326 aa14.57□□□□□ -0.08
CLSTN1-202ENST00000377298 SCGB3A1Q96QR1 104 aa14.57□□□□□ -0.08
CLSTN1-202ENST00000377298 Q5PR19 223 aa14.57□□□□□ -0.08
CLSTN1-202ENST00000377298 MYLKQ15746 1914 aa14.57□□□□□ -0.08
CLSTN1-202ENST00000377298 IGLV3-9A0A075B6K5 115 aa14.56□□□□□ -0.08
CLSTN1-202ENST00000377298 OCC1Q8TAD7 63 aa14.56□□□□□ -0.08
CLSTN1-202ENST00000377298 C2orf88Q9BSF0 95 aa14.56□□□□□ -0.08
CLSTN1-202ENST00000377298 ALKBH7Q9BT30 221 aaPredicted RBP14.56□□□□□ -0.08
CLSTN1-202ENST00000377298 FER1L5A0AVI2 2057 aa14.56□□□□□ -0.08
CLSTN1-202ENST00000377298 HIST1H2BKO60814 126 aa14.56□□□□□ -0.08
CLSTN1-202ENST00000377298 HIST1H2BJP06899 126 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 83.4 ms