RNA–Protein interactions for RNA: ENST00000376957.6

SRM-201, Transcript of spermidine synthase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRM, Length 1,266 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRM-201ENST00000376957 PSG1P11464 419 aa16.43■□□□□ 0.22
SRM-201ENST00000376957 LYL1P12980 280 aa16.43■□□□□ 0.22
SRM-201ENST00000376957 STXBP6Q8NFX7 210 aa16.43■□□□□ 0.22
SRM-201ENST00000376957 GSKIPQ9P0R6 139 aa16.43■□□□□ 0.22
SRM-201ENST00000376957 SCGB1D2O95969 90 aa16.42■□□□□ 0.22
SRM-201ENST00000376957 H2AFB2P0C5Z0 115 aa16.42■□□□□ 0.22
SRM-201ENST00000376957 POLR2GP62487 172 aaKnown RBP eCLIP16.42■□□□□ 0.22
SRM-201ENST00000376957 OR4D5Q8NGN0 318 aa16.42■□□□□ 0.22
SRM-201ENST00000376957 RNF125Q96EQ8 232 aa16.42■□□□□ 0.22
SRM-201ENST00000376957 RAB40CQ96S21 281 aa16.42■□□□□ 0.22
SRM-201ENST00000376957 TRGV9Q99603 122 aa16.42■□□□□ 0.22
SRM-201ENST00000376957 PBDC1Q9BVG4 233 aa16.42■□□□□ 0.22
SRM-201ENST00000376957 DNAH9Q9NYC9 4486 aa16.41■□□□□ 0.22
SRM-201ENST00000376957 SSSCA1O60232 199 aa16.41■□□□□ 0.22
SRM-201ENST00000376957 OR8G2PQ6IF36 304 aa16.41■□□□□ 0.22
SRM-201ENST00000376957 Q6ZWC4 215 aa16.41■□□□□ 0.22
SRM-201ENST00000376957 APRG1Q8IVJ8 170 aa16.41■□□□□ 0.22
SRM-201ENST00000376957 LILRB2Q8N423 598 aa16.41■□□□□ 0.22
SRM-201ENST00000376957 ZNF431Q8TF32 576 aaPredicted RBP16.41■□□□□ 0.22
SRM-201ENST00000376957 SMIM8Q96KF7 97 aa16.41■□□□□ 0.22
SRM-201ENST00000376957 MAP6D1Q9H9H5 199 aa16.41■□□□□ 0.22
SRM-201ENST00000376957 MPTX1A8MV57 137 aa16.4■□□□□ 0.22
SRM-201ENST00000376957 AKR1C1Q04828 323 aa16.4■□□□□ 0.22
SRM-201ENST00000376957 ASAH1Q13510 395 aa16.4■□□□□ 0.22
SRM-201ENST00000376957 USF2Q15853 346 aaPredicted RBP16.4■□□□□ 0.22
SRM-201ENST00000376957 C16orf54Q6UWD8 224 aa16.4■□□□□ 0.22
SRM-201ENST00000376957 ENKURQ8TC29 256 aa16.4■□□□□ 0.22
SRM-201ENST00000376957 PPP1R14BQ96C90 147 aa16.4■□□□□ 0.22
SRM-201ENST00000376957 RETNQ9HD89 108 aa16.4■□□□□ 0.22
SRM-201ENST00000376957 TP53TG1Q9Y2A0 90 aa16.4■□□□□ 0.22
SRM-201ENST00000376957 U3KQE9 123 aa16.4■□□□□ 0.22
SRM-201ENST00000376957 H3BP45 60 aa16.39■□□□□ 0.21
SRM-201ENST00000376957 TAS2R30P59541 319 aa16.39■□□□□ 0.21
SRM-201ENST00000376957 EDA2RQ9HAV5 297 aa16.39■□□□□ 0.21
SRM-201ENST00000376957 FBXL17Q9UF56 701 aa16.39■□□□□ 0.21
SRM-201ENST00000376957 C5orf51A6NDU8 294 aa16.38■□□□□ 0.21
SRM-201ENST00000376957 FAM25EA8MYX2 175 aa16.38■□□□□ 0.21
SRM-201ENST00000376957 BUB3O43684 328 aa16.38■□□□□ 0.21
SRM-201ENST00000376957 UPK1BO75841 260 aa16.38■□□□□ 0.21
SRM-201ENST00000376957 RPL35AP18077 110 aaKnown RBP16.38■□□□□ 0.21
SRM-201ENST00000376957 DEFB131AP59861 70 aa16.38■□□□□ 0.21
SRM-201ENST00000376957 LYZP61626 148 aa16.38■□□□□ 0.21
SRM-201ENST00000376957 SNRPD3P62318 126 aaKnown RBP16.38■□□□□ 0.21
SRM-201ENST00000376957 ZNF90Q03938 601 aa16.38■□□□□ 0.21
SRM-201ENST00000376957 C12orf45Q8N5I9 185 aaPredicted RBP16.38■□□□□ 0.21
SRM-201ENST00000376957 ZBTB8BQ8NAP8 495 aaPredicted RBP16.38■□□□□ 0.21
SRM-201ENST00000376957 GPN1Q9HCN4 374 aaPredicted RBP16.38■□□□□ 0.21
SRM-201ENST00000376957 SMCO3A2RU48 225 aa16.37■□□□□ 0.21
SRM-201ENST00000376957 K7EQG2 157 aa16.37■□□□□ 0.21
SRM-201ENST00000376957 L7N2F9 121 aa16.37■□□□□ 0.21
SRM-201ENST00000376957 SPRY2O43597 315 aa16.37■□□□□ 0.21
SRM-201ENST00000376957 VAMP2P63027 116 aa16.37■□□□□ 0.21
SRM-201ENST00000376957 SIGLEC15Q6ZMC9 328 aa16.37■□□□□ 0.21
SRM-201ENST00000376957 STHQ8IWL8 128 aa16.37■□□□□ 0.21
SRM-201ENST00000376957 THAP8Q8NA92 274 aa16.37■□□□□ 0.21
SRM-201ENST00000376957 BPIFCQ8NFQ6 507 aa16.37■□□□□ 0.21
SRM-201ENST00000376957 OR10P1Q8NGE3 313 aa16.37■□□□□ 0.21
SRM-201ENST00000376957 GLMPQ8WWB7 406 aa16.37■□□□□ 0.21
SRM-201ENST00000376957 CSTL1Q9H114 145 aa16.37■□□□□ 0.21
SRM-201ENST00000376957 TSC22D2O75157 780 aa16.36■□□□□ 0.21
SRM-201ENST00000376957 C1orf194Q5T5A4 169 aa16.36■□□□□ 0.21
SRM-201ENST00000376957 S100A7AQ86SG5 101 aa16.36■□□□□ 0.21
SRM-201ENST00000376957 NRN1Q9NPD7 142 aa16.36■□□□□ 0.21
SRM-201ENST00000376957 TENM3Q9P273 2699 aa16.35■□□□□ 0.21
SRM-201ENST00000376957 IGKV1D-37A0A075B6S9 117 aa16.35■□□□□ 0.21
SRM-201ENST00000376957 PVALBP20472 110 aaPredicted RBP16.35■□□□□ 0.21
SRM-201ENST00000376957 DEFA1P59665 94 aa16.35■□□□□ 0.21
SRM-201ENST00000376957 DEFA3P59666 94 aa16.35■□□□□ 0.21
SRM-201ENST00000376957 OR2F1Q13607 317 aa16.35■□□□□ 0.21
SRM-201ENST00000376957 CASC10Q5T4H9 136 aa16.35■□□□□ 0.21
SRM-201ENST00000376957 GSG1LQ6UXU4 331 aa16.35■□□□□ 0.21
SRM-201ENST00000376957 TMEM144Q7Z5S9 345 aa16.35■□□□□ 0.21
SRM-201ENST00000376957 SEC22CQ9BRL7 303 aa16.35■□□□□ 0.21
SRM-201ENST00000376957 OVOL2Q9BRP0 275 aa16.35■□□□□ 0.21
SRM-201ENST00000376957 SEPSECSQ9HD40 501 aaKnown RBP16.35■□□□□ 0.21
SRM-201ENST00000376957 MGAT4CQ9UBM8 478 aa16.35■□□□□ 0.21
SRM-201ENST00000376957 STAB2Q8WWQ8 2551 aa16.35■□□□□ 0.21
SRM-201ENST00000376957 PRSS46E5RG02 174 aa16.34■□□□□ 0.21
SRM-201ENST00000376957 DEFB135Q30KP9 77 aa16.34■□□□□ 0.21
SRM-201ENST00000376957 LEMD1Q68G75 181 aa16.34■□□□□ 0.21
SRM-201ENST00000376957 ACOT7LQ6ZUV0 252 aa16.34■□□□□ 0.21
SRM-201ENST00000376957 DCANP1Q8TF63 244 aa16.34■□□□□ 0.21
SRM-201ENST00000376957 C2orf50Q96LR7 162 aa16.34■□□□□ 0.21
SRM-201ENST00000376957 TBC1D24Q9ULP9 559 aa16.34■□□□□ 0.21
SRM-201ENST00000376957 SLC45A2Q9UMX9 530 aa16.34■□□□□ 0.21
SRM-201ENST00000376957 FNDC10F2Z333 226 aa16.33■□□□□ 0.2
SRM-201ENST00000376957 ZNF688P0C7X2 276 aa16.33■□□□□ 0.2
SRM-201ENST00000376957 DLK1P80370 383 aa16.33■□□□□ 0.2
SRM-201ENST00000376957 SAMD13Q5VXD3 122 aa16.33■□□□□ 0.2
SRM-201ENST00000376957 NPVFQ9HCQ7 196 aa16.33■□□□□ 0.2
SRM-201ENST00000376957 MBPP02686 304 aaPredicted RBP16.32■□□□□ 0.2
SRM-201ENST00000376957 IL5P05113 134 aa16.32■□□□□ 0.2
SRM-201ENST00000376957 METTL15P1P0C7V9 234 aa16.32■□□□□ 0.2
SRM-201ENST00000376957 ID1P41134 155 aa16.32■□□□□ 0.2
SRM-201ENST00000376957 SELENOTP62341 195 aa16.32■□□□□ 0.2
SRM-201ENST00000376957 TMEM41BQ5BJD5 291 aa16.32■□□□□ 0.2
SRM-201ENST00000376957 OR8I2Q8N0Y5 310 aa16.32■□□□□ 0.2
SRM-201ENST00000376957 TMEM217Q8N7C4 229 aa16.32■□□□□ 0.2
SRM-201ENST00000376957 GATAD1Q8WUU5 269 aa16.32■□□□□ 0.2
SRM-201ENST00000376957 RNF183Q96D59 192 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 115.3 ms