RNA–Protein interactions for RNA: ENST00000376709.8

VSX1-202, Transcript of visual system homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VSX1, Length 2,192 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-202ENST00000376709 RD3LP0DJH9 198 aa16.06■□□□□ 0.16
VSX1-202ENST00000376709 EFNA4P52798 201 aa16.06■□□□□ 0.16
VSX1-202ENST00000376709 RANP62826 216 aaKnown RBP16.06■□□□□ 0.16
VSX1-202ENST00000376709 COA6Q5JTJ3 125 aaKnown RBP16.06■□□□□ 0.16
VSX1-202ENST00000376709 RASL11BQ9BPW5 248 aa16.06■□□□□ 0.16
VSX1-202ENST00000376709 RNASE7Q9H1E1 156 aaKnown RBP16.06■□□□□ 0.16
VSX1-202ENST00000376709 TRAV9-1A0A075B6T8 112 aa16.05■□□□□ 0.16
VSX1-202ENST00000376709 IGLC1P0CG04 106 aa16.05■□□□□ 0.16
VSX1-202ENST00000376709 LINC00479Q96M42 142 aa16.05■□□□□ 0.16
VSX1-202ENST00000376709 PEX7O00628 323 aa16.04■□□□□ 0.16
VSX1-202ENST00000376709 GCGP01275 180 aa16.04■□□□□ 0.16
VSX1-202ENST00000376709 AMBPP02760 352 aa16.04■□□□□ 0.16
VSX1-202ENST00000376709 PSG1P11464 419 aa16.04■□□□□ 0.16
VSX1-202ENST00000376709 LYZP61626 148 aa16.04■□□□□ 0.16
VSX1-202ENST00000376709 C5orf64Q2M2E5 130 aa16.04■□□□□ 0.16
VSX1-202ENST00000376709 IGLV2-8P01709 118 aa16.04■□□□□ 0.16
VSX1-202ENST00000376709 HOXB4P17483 251 aaPredicted RBP16.04■□□□□ 0.16
VSX1-202ENST00000376709 TAS2R60P59551 318 aa16.04■□□□□ 0.16
VSX1-202ENST00000376709 PLP1P60201 277 aa16.04■□□□□ 0.16
VSX1-202ENST00000376709 FBLN7Q53RD9 439 aa16.04■□□□□ 0.16
VSX1-202ENST00000376709 NHLRC2Q8NBF2 726 aa16.04■□□□□ 0.16
VSX1-202ENST00000376709 HIGD1AQ9Y241 93 aa16.04■□□□□ 0.16
VSX1-202ENST00000376709 NCBP2LA6PVI3 153 aaKnown RBP16.03■□□□□ 0.16
VSX1-202ENST00000376709 IBA57Q5T440 356 aaKnown RBP16.03■□□□□ 0.16
VSX1-202ENST00000376709 LEMD1Q68G75 181 aa16.03■□□□□ 0.16
VSX1-202ENST00000376709 OR1L6Q8NGR2 347 aa16.03■□□□□ 0.16
VSX1-202ENST00000376709 OSTCQ9NRP0 149 aa16.03■□□□□ 0.16
VSX1-202ENST00000376709 ISLRO14498 428 aa16.03■□□□□ 0.16
VSX1-202ENST00000376709 NBEAP1P0C6P0 100 aa16.03■□□□□ 0.16
VSX1-202ENST00000376709 PDLIM4P50479 330 aa16.03■□□□□ 0.16
VSX1-202ENST00000376709 DYNAPQ8N1N2 210 aa16.03■□□□□ 0.16
VSX1-202ENST00000376709 USP24Q9UPU5 2620 aa16.02■□□□□ 0.16
VSX1-202ENST00000376709 OOSP1A8MZH6 123 aa16.02■□□□□ 0.16
VSX1-202ENST00000376709 MINOS1Q5TGZ0 78 aa16.02■□□□□ 0.16
VSX1-202ENST00000376709 MINOS1-NBL1R4GNA1 71 aa16.02■□□□□ 0.16
VSX1-202ENST00000376709 AKAP6Q13023 2319 aa16.02■□□□□ 0.15
VSX1-202ENST00000376709 K7EIM0 57 aa16.02■□□□□ 0.15
VSX1-202ENST00000376709 SLC25A5P05141 298 aaKnown RBP16.02■□□□□ 0.15
VSX1-202ENST00000376709 HIST1H1BP16401 226 aaKnown RBP16.02■□□□□ 0.15
VSX1-202ENST00000376709 OR8I2Q8N0Y5 310 aa16.02■□□□□ 0.15
VSX1-202ENST00000376709 SERTAD4Q9NUC0 356 aa16.02■□□□□ 0.15
VSX1-202ENST00000376709 TRAV34A0A0B4J273 112 aa16.01■□□□□ 0.15
VSX1-202ENST00000376709 GP9P14770 177 aa16.01■□□□□ 0.15
VSX1-202ENST00000376709 CBLN1P23435 193 aa16.01■□□□□ 0.15
VSX1-202ENST00000376709 YPEL3P61236 119 aaPredicted RBP16.01■□□□□ 0.15
VSX1-202ENST00000376709 GNG5P63218 68 aa16.01■□□□□ 0.15
VSX1-202ENST00000376709 RBM14Q96PK6 669 aaKnown RBP16.01■□□□□ 0.15
VSX1-202ENST00000376709 SIRPDQ9H106 197 aa16.01■□□□□ 0.15
VSX1-202ENST00000376709 MED13LQ71F56 2210 aa16.01■□□□□ 0.15
VSX1-202ENST00000376709 PGPA6NDG6 321 aa16■□□□□ 0.15
VSX1-202ENST00000376709 TOX4O94842 621 aa16■□□□□ 0.15
VSX1-202ENST00000376709 MYCNOSP40205 109 aa16■□□□□ 0.15
VSX1-202ENST00000376709 BPESC1Q9GZL8 116 aa16■□□□□ 0.15
VSX1-202ENST00000376709 SPTAN1Q13813 2472 aaKnown RBP16■□□□□ 0.15
VSX1-202ENST00000376709 CSMD1Q96PZ7 3565 aa16■□□□□ 0.15
VSX1-202ENST00000376709 IGHV2-70DA0A0C4DH43 119 aa16■□□□□ 0.15
VSX1-202ENST00000376709 IGKV1-17P01599 117 aa16■□□□□ 0.15
VSX1-202ENST00000376709 ADMP35318 185 aa16■□□□□ 0.15
VSX1-202ENST00000376709 UBE2G1P62253 170 aa16■□□□□ 0.15
VSX1-202ENST00000376709 KLF17Q5JT82 389 aaPredicted RBP16■□□□□ 0.15
VSX1-202ENST00000376709 BAGE2Q86Y30 109 aa16■□□□□ 0.15
VSX1-202ENST00000376709 ARPC1AQ92747 370 aa16■□□□□ 0.15
VSX1-202ENST00000376709 PRDM13Q9H4Q3 707 aa16■□□□□ 0.15
VSX1-202ENST00000376709 EPDR1Q9UM22 224 aa16■□□□□ 0.15
VSX1-202ENST00000376709 A0A1B0GUS0 222 aa15.99■□□□□ 0.15
VSX1-202ENST00000376709 CX3CL1P78423 397 aa15.99■□□□□ 0.15
VSX1-202ENST00000376709 RPL19P84098 196 aaKnown RBP15.99■□□□□ 0.15
VSX1-202ENST00000376709 ZNF562Q6V9R5 426 aa15.99■□□□□ 0.15
VSX1-202ENST00000376709 SLC25A39Q9BZJ4 359 aaPredicted RBP15.99■□□□□ 0.15
VSX1-202ENST00000376709 RPH3ALQ9UNE2 315 aa15.99■□□□□ 0.15
VSX1-202ENST00000376709 ZNF705GA8MUZ8 300 aaPredicted RBP15.99■□□□□ 0.15
VSX1-202ENST00000376709 H3BTX0 84 aa15.99■□□□□ 0.15
VSX1-202ENST00000376709 TMEM11P17152 192 aa15.99■□□□□ 0.15
VSX1-202ENST00000376709 IER3P46695 156 aa15.99■□□□□ 0.15
VSX1-202ENST00000376709 SVEP1Q4LDE5 3571 aa15.98■□□□□ 0.15
VSX1-202ENST00000376709 TCL1AP56279 114 aa15.98■□□□□ 0.15
VSX1-202ENST00000376709 ZNF600Q6ZNG1 722 aa15.98■□□□□ 0.15
VSX1-202ENST00000376709 TRAV20A0A0B4J274 112 aa15.97■□□□□ 0.15
VSX1-202ENST00000376709 SPINK4O60575 86 aa15.97■□□□□ 0.15
VSX1-202ENST00000376709 FRMD6-AS1P0C7T7 363 aa15.97■□□□□ 0.15
VSX1-202ENST00000376709 TMEM183BQ1AE95 376 aa15.97■□□□□ 0.15
VSX1-202ENST00000376709 Q8N6K4 173 aa15.97■□□□□ 0.15
VSX1-202ENST00000376709 MRPL18Q9H0U6 180 aaKnown RBP15.97■□□□□ 0.15
VSX1-202ENST00000376709 S4R3C0 116 aa15.97■□□□□ 0.15
VSX1-202ENST00000376709 ZFYVE26Q68DK2 2539 aa15.96■□□□□ 0.15
VSX1-202ENST00000376709 NPIPB5A8MRT5 1133 aa15.96■□□□□ 0.15
VSX1-202ENST00000376709 EBI3Q14213 229 aa15.96■□□□□ 0.15
VSX1-202ENST00000376709 C9orf152Q5JTZ5 239 aa15.96■□□□□ 0.15
VSX1-202ENST00000376709 C5orf17Q8NAS9 161 aa15.96■□□□□ 0.15
VSX1-202ENST00000376709 Q9H3A6 140 aa15.96■□□□□ 0.15
VSX1-202ENST00000376709 TBL2Q9Y4P3 447 aaKnown RBP15.96■□□□□ 0.15
VSX1-202ENST00000376709 CACNA1BQ00975 2339 aa15.96■□□□□ 0.15
VSX1-202ENST00000376709 USP9XQ93008 2570 aaPredicted RBP15.96■□□□□ 0.15
VSX1-202ENST00000376709 SNURFLB1AK76 121 aa15.96■□□□□ 0.14
VSX1-202ENST00000376709 UBE2E1P51965 193 aa15.96■□□□□ 0.14
VSX1-202ENST00000376709 LMO4P61968 165 aa15.96■□□□□ 0.14
VSX1-202ENST00000376709 SLC35B1P78383 322 aa15.96■□□□□ 0.14
VSX1-202ENST00000376709 NDPQ00604 133 aa15.96■□□□□ 0.14
VSX1-202ENST00000376709 ASPHD1Q5U4P2 390 aa15.96■□□□□ 0.14
VSX1-202ENST00000376709 PRR27Q6MZM9 219 aa15.96■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms