RNA–Protein interactions for RNA: ENST00000376636.7

VPS13A-205, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13A, Length 11,145 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-205ENST00000376636 PLA2G2FQ9BZM2 168 aa9.75□□□□□ -0.85
VPS13A-205ENST00000376636 TMEM126AQ9H061 195 aa9.75□□□□□ -0.85
VPS13A-205ENST00000376636 VCYO14598 125 aa9.75□□□□□ -0.85
VPS13A-205ENST00000376636 GNG5P63218 68 aa9.75□□□□□ -0.85
VPS13A-205ENST00000376636 C1orf122Q6ZSJ8 110 aa9.75□□□□□ -0.85
VPS13A-205ENST00000376636 LRP5O75197 1615 aa9.75□□□□□ -0.85
VPS13A-205ENST00000376636 D6R8Y8 96 aa9.75□□□□□ -0.85
VPS13A-205ENST00000376636 C1orf194Q5T5A4 169 aa9.75□□□□□ -0.85
VPS13A-205ENST00000376636 TRAV41A0A0B4J266 112 aa9.75□□□□□ -0.85
VPS13A-205ENST00000376636 UTF1Q5T230 341 aa9.75□□□□□ -0.85
VPS13A-205ENST00000376636 ADAMTSL5Q6ZMM2 481 aa9.75□□□□□ -0.85
VPS13A-205ENST00000376636 GLMPQ8WWB7 406 aa9.74□□□□□ -0.85
VPS13A-205ENST00000376636 WFDC6Q9BQY6 131 aa9.74□□□□□ -0.85
VPS13A-205ENST00000376636 CD160O95971 181 aa9.74□□□□□ -0.85
VPS13A-205ENST00000376636 ZNF625Q96I27 306 aaPredicted RBP9.74□□□□□ -0.85
VPS13A-205ENST00000376636 TEX38Q6PEX7 206 aa9.74□□□□□ -0.85
VPS13A-205ENST00000376636 A0A1W2PQF6 199 aa9.74□□□□□ -0.85
VPS13A-205ENST00000376636 PILRAQ9UKJ1 303 aa9.73□□□□□ -0.85
VPS13A-205ENST00000376636 F8W1H4 67 aa9.73□□□□□ -0.85
VPS13A-205ENST00000376636 FAM181AQ8N9Y4 354 aa9.73□□□□□ -0.85
VPS13A-205ENST00000376636 C1QTNF4Q9BXJ3 329 aa9.73□□□□□ -0.85
VPS13A-205ENST00000376636 CD33P20138 364 aa9.73□□□□□ -0.85
VPS13A-205ENST00000376636 FAM166AQ6J272 317 aa9.73□□□□□ -0.85
VPS13A-205ENST00000376636 FDCSPQ8NFU4 85 aa9.73□□□□□ -0.85
VPS13A-205ENST00000376636 S4R3C0 116 aa9.73□□□□□ -0.85
VPS13A-205ENST00000376636 IGHG3P01860 377 aa9.73□□□□□ -0.85
VPS13A-205ENST00000376636 A0A1W2PRX2 142 aa9.73□□□□□ -0.85
VPS13A-205ENST00000376636 ACTL10Q5JWF8 245 aa9.73□□□□□ -0.85
VPS13A-205ENST00000376636 RCHY1Q96PM5 261 aa9.73□□□□□ -0.85
VPS13A-205ENST00000376636 PRSS22Q9GZN4 317 aa9.73□□□□□ -0.85
VPS13A-205ENST00000376636 PSG8Q9UQ74 426 aa9.73□□□□□ -0.85
VPS13A-205ENST00000376636 PRIMA1Q86XR5 153 aa9.73□□□□□ -0.85
VPS13A-205ENST00000376636 ZNF525Q8N782 197 aa9.73□□□□□ -0.85
VPS13A-205ENST00000376636 PSG3Q16557 428 aa9.73□□□□□ -0.85
VPS13A-205ENST00000376636 ZNF114Q8NC26 417 aa9.73□□□□□ -0.85
VPS13A-205ENST00000376636 UBR3Q6ZT12 1888 aa9.73□□□□□ -0.85
VPS13A-205ENST00000376636 GZMMP51124 257 aa9.72□□□□□ -0.85
VPS13A-205ENST00000376636 TBX6O95947 436 aaPredicted RBP9.72□□□□□ -0.85
VPS13A-205ENST00000376636 PAX8Q06710 450 aa9.72□□□□□ -0.85
VPS13A-205ENST00000376636 EFNB3Q15768 340 aa9.72□□□□□ -0.85
VPS13A-205ENST00000376636 BHLHA9Q7RTU4 235 aa9.72□□□□□ -0.85
VPS13A-205ENST00000376636 HIST3H2BBQ8N257 126 aa9.72□□□□□ -0.85
VPS13A-205ENST00000376636 ZNF501Q96CX3 271 aaPredicted RBP9.72□□□□□ -0.85
VPS13A-205ENST00000376636 LTBP4Q8N2S1 1624 aa9.72□□□□□ -0.85
VPS13A-205ENST00000376636 A0A087X0K7 114 aa9.72□□□□□ -0.85
VPS13A-205ENST00000376636 SAA2-SAA4A0A096LPE2 208 aa9.72□□□□□ -0.85
VPS13A-205ENST00000376636 FOXS1O43638 330 aa9.72□□□□□ -0.85
VPS13A-205ENST00000376636 SAA2P0DJI9 122 aaPredicted RBP9.72□□□□□ -0.85
VPS13A-205ENST00000376636 ARHGAP21Q5T5U3 1957 aa9.72□□□□□ -0.85
VPS13A-205ENST00000376636 C12orf77C9JDV5 145 aa9.72□□□□□ -0.85
VPS13A-205ENST00000376636 IL18BPO95998 194 aa9.72□□□□□ -0.85
VPS13A-205ENST00000376636 ARHGAP32A7KAX9 2087 aa9.72□□□□□ -0.85
VPS13A-205ENST00000376636 C17orf98A8MV24 154 aa9.72□□□□□ -0.85
VPS13A-205ENST00000376636 TRBV24-1A0A075B6N3 115 aa9.72□□□□□ -0.85
VPS13A-205ENST00000376636 IGHV3OR16-10A0A075B7F0 116 aa9.72□□□□□ -0.85
VPS13A-205ENST00000376636 MMP23AO75900 390 aa9.72□□□□□ -0.85
VPS13A-205ENST00000376636 NKAPP1Q8N9T2 125 aa9.72□□□□□ -0.85
VPS13A-205ENST00000376636 SMAD7O15105 426 aaKnown RBP9.71□□□□□ -0.85
VPS13A-205ENST00000376636 YPEL1O60688 119 aa9.71□□□□□ -0.85
VPS13A-205ENST00000376636 IMMP1LQ96LU5 166 aa9.71□□□□□ -0.85
VPS13A-205ENST00000376636 YPEL2Q96QA6 119 aa9.71□□□□□ -0.85
VPS13A-205ENST00000376636 MRPL27Q9P0M9 148 aaKnown RBP9.71□□□□□ -0.85
VPS13A-205ENST00000376636 BRCA1P38398 1863 aaKnown RBP9.71□□□□□ -0.85
VPS13A-205ENST00000376636 COLCA1Q6ZS62 124 aa9.71□□□□□ -0.85
VPS13A-205ENST00000376636 PSG1P11464 419 aa9.71□□□□□ -0.86
VPS13A-205ENST00000376636 BSPH1Q075Z2 132 aa9.71□□□□□ -0.86
VPS13A-205ENST00000376636 PPDPFLQ8WWR9 84 aa9.71□□□□□ -0.86
VPS13A-205ENST00000376636 C18orf12Q96KH6 178 aa9.71□□□□□ -0.86
VPS13A-205ENST00000376636 SYS1-DBNDD2H3BUS1 97 aa9.71□□□□□ -0.86
VPS13A-205ENST00000376636 PEBP1P30086 187 aaKnown RBP9.71□□□□□ -0.86
VPS13A-205ENST00000376636 RTBDNQ9BSG5 229 aaPredicted RBP9.71□□□□□ -0.86
VPS13A-205ENST00000376636 Q5BKY6 102 aa9.71□□□□□ -0.86
VPS13A-205ENST00000376636 C7orf69Q9H7B7 122 aa9.7□□□□□ -0.86
VPS13A-205ENST00000376636 TET1Q8NFU7 2136 aa9.7□□□□□ -0.86
VPS13A-205ENST00000376636 PCOLCEQ15113 449 aa9.7□□□□□ -0.86
VPS13A-205ENST00000376636 LY6G5BQ8NDX9 201 aa9.7□□□□□ -0.86
VPS13A-205ENST00000376636 hADV29S1A0JD25 119 aa9.7□□□□□ -0.86
VPS13A-205ENST00000376636 TCRAP04437 139 aa9.7□□□□□ -0.86
VPS13A-205ENST00000376636 LCTP09848 1927 aa9.7□□□□□ -0.86
VPS13A-205ENST00000376636 NPIPB5A8MRT5 1133 aa9.7□□□□□ -0.86
VPS13A-205ENST00000376636 AMBPP02760 352 aa9.7□□□□□ -0.86
VPS13A-205ENST00000376636 RBM3P98179 157 aaKnown RBP9.7□□□□□ -0.86
VPS13A-205ENST00000376636 POU2AF1Q16633 256 aa9.7□□□□□ -0.86
VPS13A-205ENST00000376636 RPUSD1Q9UJJ7 312 aaKnown RBP9.7□□□□□ -0.86
VPS13A-205ENST00000376636 TAF1LQ8IZX4 1826 aa9.7□□□□□ -0.86
VPS13A-205ENST00000376636 GAGE12JA6NER3 117 aa9.7□□□□□ -0.86
VPS13A-205ENST00000376636 GAGE1Q13065 139 aa9.7□□□□□ -0.86
VPS13A-205ENST00000376636 GAGE4Q13068 117 aa9.7□□□□□ -0.86
VPS13A-205ENST00000376636 GAGE5Q13069 117 aa9.7□□□□□ -0.86
VPS13A-205ENST00000376636 GAGE6Q13070 117 aa9.7□□□□□ -0.86
VPS13A-205ENST00000376636 NABP1Q96AH0 204 aa9.7□□□□□ -0.86
VPS13A-205ENST00000376636 CENPVL1A0A0U1RR11 272 aa9.69□□□□□ -0.86
VPS13A-205ENST00000376636 AMELYQ99218 206 aa9.69□□□□□ -0.86
VPS13A-205ENST00000376636 RAMP3O60896 148 aa9.69□□□□□ -0.86
VPS13A-205ENST00000376636 FAM219BQ5XKK7 198 aa9.69□□□□□ -0.86
VPS13A-205ENST00000376636 LSM4Q9Y4Z0 139 aaKnown RBP9.69□□□□□ -0.86
VPS13A-205ENST00000376636 IGFBP3P17936 291 aaPredicted RBP9.69□□□□□ -0.86
VPS13A-205ENST00000376636 SRXN1Q9BYN0 137 aa9.69□□□□□ -0.86
VPS13A-205ENST00000376636 IGHV3OR16-8A0A075B7F1 116 aa9.69□□□□□ -0.86
VPS13A-205ENST00000376636 TRGV1A0A0A0MS02 117 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms