RNA–Protein interactions for RNA: ENST00000376259.6

TNFRSF1B-201, Transcript of TNF receptor superfamily member 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF1B, Length 3,683 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-201ENST00000376259 LAMTOR2Q9Y2Q5 125 aa11.7□□□□□ -0.54
TNFRSF1B-201ENST00000376259 TNRC6AQ8NDV7 1962 aaKnown RBP11.7□□□□□ -0.54
TNFRSF1B-201ENST00000376259 ZNF883P0CG24 379 aa11.7□□□□□ -0.54
TNFRSF1B-201ENST00000376259 RNASE2P10153 161 aaKnown RBP11.7□□□□□ -0.54
TNFRSF1B-201ENST00000376259 C22orf34Q6ZV56 151 aa11.7□□□□□ -0.54
TNFRSF1B-201ENST00000376259 GAFA1Q96PS6 74 aa11.7□□□□□ -0.54
TNFRSF1B-201ENST00000376259 CLEC7AQ9BXN2 247 aa11.7□□□□□ -0.54
TNFRSF1B-201ENST00000376259 NGBQ9NPG2 151 aa11.7□□□□□ -0.54
TNFRSF1B-201ENST00000376259 HIF1ANQ9NWT6 349 aa11.7□□□□□ -0.54
TNFRSF1B-201ENST00000376259 A8MWL6 223 aa11.69□□□□□ -0.54
TNFRSF1B-201ENST00000376259 TYMSP04818 313 aa11.69□□□□□ -0.54
TNFRSF1B-201ENST00000376259 S100A7P31151 101 aa11.69□□□□□ -0.54
TNFRSF1B-201ENST00000376259 TMEM200BQ69YZ2 307 aa11.69□□□□□ -0.54
TNFRSF1B-201ENST00000376259 CENPVQ7Z7K6 275 aaPredicted RBP11.69□□□□□ -0.54
TNFRSF1B-201ENST00000376259 PARD6GQ9BYG4 376 aaPredicted RBP11.69□□□□□ -0.54
TNFRSF1B-201ENST00000376259 hDV102S1A0JD36 115 aa11.69□□□□□ -0.54
TNFRSF1B-201ENST00000376259 FCER1GP30273 86 aa11.69□□□□□ -0.54
TNFRSF1B-201ENST00000376259 TMEM116Q8NCL8 245 aa11.69□□□□□ -0.54
TNFRSF1B-201ENST00000376259 BEND2Q8NDZ0 799 aa11.69□□□□□ -0.54
TNFRSF1B-201ENST00000376259 NUP35Q8NFH5 326 aa11.69□□□□□ -0.54
TNFRSF1B-201ENST00000376259 NAA38Q9BRA0 125 aaKnown RBP11.69□□□□□ -0.54
TNFRSF1B-201ENST00000376259 FOXA2Q9Y261 457 aaPredicted RBP11.69□□□□□ -0.54
TNFRSF1B-201ENST00000376259 GNG7O60262 68 aa11.68□□□□□ -0.54
TNFRSF1B-201ENST00000376259 PCP4P48539 62 aa11.68□□□□□ -0.54
TNFRSF1B-201ENST00000376259 CX3CL1P78423 397 aa11.68□□□□□ -0.54
TNFRSF1B-201ENST00000376259 OR4F17Q8NGA8 305 aa11.68□□□□□ -0.54
TNFRSF1B-201ENST00000376259 DSCAMO60469 2012 aa11.68□□□□□ -0.54
TNFRSF1B-201ENST00000376259 IGHV3-66A0A0C4DH42 116 aa11.68□□□□□ -0.54
TNFRSF1B-201ENST00000376259 NUDT3O95989 172 aa11.68□□□□□ -0.54
TNFRSF1B-201ENST00000376259 MBNL2Q5VZF2 373 aaKnown RBP11.68□□□□□ -0.54
TNFRSF1B-201ENST00000376259 HIGD1AQ9Y241 93 aa11.68□□□□□ -0.54
TNFRSF1B-201ENST00000376259 OR4C46A6NHA9 309 aa11.68□□□□□ -0.54
TNFRSF1B-201ENST00000376259 K7EQM0 130 aa11.68□□□□□ -0.54
TNFRSF1B-201ENST00000376259 RPL11P62913 178 aaKnown RBP11.68□□□□□ -0.54
TNFRSF1B-201ENST00000376259 TM4SF20Q53R12 229 aa11.68□□□□□ -0.54
TNFRSF1B-201ENST00000376259 PNKDQ8N490 385 aa11.68□□□□□ -0.54
TNFRSF1B-201ENST00000376259 C1orf162Q8NEQ5 155 aaPredicted RBP11.68□□□□□ -0.54
TNFRSF1B-201ENST00000376259 TMEM14BQ9NUH8 114 aa11.68□□□□□ -0.54
TNFRSF1B-201ENST00000376259 C17orf100A8MU93 164 aa11.67□□□□□ -0.54
TNFRSF1B-201ENST00000376259 WT1-ASQ06250 92 aa11.67□□□□□ -0.54
TNFRSF1B-201ENST00000376259 IGFL4Q6B9Z1 124 aa11.67□□□□□ -0.54
TNFRSF1B-201ENST00000376259 TSKUQ8WUA8 353 aa11.67□□□□□ -0.54
TNFRSF1B-201ENST00000376259 SPRY4Q9C004 299 aa11.67□□□□□ -0.54
TNFRSF1B-201ENST00000376259 OSTCQ9NRP0 149 aa11.67□□□□□ -0.54
TNFRSF1B-201ENST00000376259 IZUMO1RA6ND01 250 aa11.67□□□□□ -0.54
TNFRSF1B-201ENST00000376259 FBLL1A6NHQ2 334 aaKnown RBP11.67□□□□□ -0.54
TNFRSF1B-201ENST00000376259 DLEU1O43261 78 aa11.67□□□□□ -0.54
TNFRSF1B-201ENST00000376259 OSR1Q8TAX0 266 aaPredicted RBP11.67□□□□□ -0.54
TNFRSF1B-201ENST00000376259 RAB37Q96AX2 223 aa11.67□□□□□ -0.54
TNFRSF1B-201ENST00000376259 CHRDL1Q9BU40 450 aa11.67□□□□□ -0.54
TNFRSF1B-201ENST00000376259 GNB1LQ9BYB4 327 aa11.67□□□□□ -0.54
TNFRSF1B-201ENST00000376259 FNDC4Q9H6D8 234 aaPredicted RBP11.67□□□□□ -0.54
TNFRSF1B-201ENST00000376259 LSM4Q9Y4Z0 139 aaKnown RBP11.67□□□□□ -0.54
TNFRSF1B-201ENST00000376259 IL4P05112 153 aa11.67□□□□□ -0.54
TNFRSF1B-201ENST00000376259 CA7P43166 264 aa11.67□□□□□ -0.54
TNFRSF1B-201ENST00000376259 Q9H3A6 140 aa11.67□□□□□ -0.54
TNFRSF1B-201ENST00000376259 TLN2Q9Y4G6 2542 aa11.67□□□□□ -0.54
TNFRSF1B-201ENST00000376259 F2RL2O00254 374 aa11.66□□□□□ -0.54
TNFRSF1B-201ENST00000376259 NIT1Q86X76 327 aa11.66□□□□□ -0.54
TNFRSF1B-201ENST00000376259 ABHD17AQ96GS6 310 aa11.66□□□□□ -0.54
TNFRSF1B-201ENST00000376259 M0R3E3 92 aa11.66□□□□□ -0.54
TNFRSF1B-201ENST00000376259 TDGF1P13385 188 aa11.66□□□□□ -0.54
TNFRSF1B-201ENST00000376259 CSN1S1P47710 185 aa11.66□□□□□ -0.54
TNFRSF1B-201ENST00000376259 TMEM136Q6ZRR5 245 aa11.66□□□□□ -0.54
TNFRSF1B-201ENST00000376259 C18orf15Q96N68 181 aa11.66□□□□□ -0.54
TNFRSF1B-201ENST00000376259 RNF114Q9Y508 228 aa11.66□□□□□ -0.54
TNFRSF1B-201ENST00000376259 A0A1W2PRE2 83 aa11.66□□□□□ -0.54
TNFRSF1B-201ENST00000376259 ORM1P02763 201 aa11.66□□□□□ -0.54
TNFRSF1B-201ENST00000376259 PPOXP50336 477 aa11.66□□□□□ -0.54
TNFRSF1B-201ENST00000376259 TPTE2P1Q5T6R2 138 aa11.66□□□□□ -0.54
TNFRSF1B-201ENST00000376259 C1orf174Q8IYL3 243 aa11.66□□□□□ -0.54
TNFRSF1B-201ENST00000376259 SFXN3Q9BWM7 321 aa11.66□□□□□ -0.54
TNFRSF1B-201ENST00000376259 DKK4Q9UBT3 224 aa11.66□□□□□ -0.54
TNFRSF1B-201ENST00000376259 EPDR1Q9UM22 224 aa11.66□□□□□ -0.54
TNFRSF1B-201ENST00000376259 P0C879 139 aa11.65□□□□□ -0.54
TNFRSF1B-201ENST00000376259 COA6Q5JTJ3 125 aaKnown RBP11.65□□□□□ -0.54
TNFRSF1B-201ENST00000376259 MRPL36Q9P0J6 103 aaKnown RBP11.65□□□□□ -0.54
TNFRSF1B-201ENST00000376259 MYO9AB2RTY4 2548 aa11.65□□□□□ -0.54
TNFRSF1B-201ENST00000376259 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.65□□□□□ -0.54
TNFRSF1B-201ENST00000376259 BTF3P20290 206 aaKnown RBP11.65□□□□□ -0.54
TNFRSF1B-201ENST00000376259 HBBP68871 147 aa11.65□□□□□ -0.54
TNFRSF1B-201ENST00000376259 RITA1Q96K30 269 aa11.65□□□□□ -0.54
TNFRSF1B-201ENST00000376259 RBM14Q96PK6 669 aaKnown RBP11.65□□□□□ -0.54
TNFRSF1B-201ENST00000376259 CBY1Q9Y3M2 126 aa11.65□□□□□ -0.54
TNFRSF1B-201ENST00000376259 LINC00312Q9Y6C7 94 aa11.65□□□□□ -0.54
TNFRSF1B-201ENST00000376259 C9JCJ5 164 aa11.65□□□□□ -0.54
TNFRSF1B-201ENST00000376259 H0YJW9 148 aa11.65□□□□□ -0.54
TNFRSF1B-201ENST00000376259 IGHG3P01860 377 aa11.65□□□□□ -0.54
TNFRSF1B-201ENST00000376259 YPEL3P61236 119 aaPredicted RBP11.65□□□□□ -0.54
TNFRSF1B-201ENST00000376259 SELENOTP62341 195 aa11.65□□□□□ -0.54
TNFRSF1B-201ENST00000376259 STPG4Q8N801 248 aa11.65□□□□□ -0.54
TNFRSF1B-201ENST00000376259 C5orf17Q8NAS9 161 aa11.65□□□□□ -0.54
TNFRSF1B-201ENST00000376259 TMUB1Q9BVT8 246 aa11.65□□□□□ -0.54
TNFRSF1B-201ENST00000376259 MAP1LC3CQ9BXW4 147 aa11.65□□□□□ -0.54
TNFRSF1B-201ENST00000376259 TMEM191AQ9H0A3 160 aa11.65□□□□□ -0.54
TNFRSF1B-201ENST00000376259 A0A1W2PPI3 338 aa11.64□□□□□ -0.55
TNFRSF1B-201ENST00000376259 OR2J3O76001 311 aa11.64□□□□□ -0.55
TNFRSF1B-201ENST00000376259 PPIFP30405 207 aaKnown RBP11.64□□□□□ -0.55
TNFRSF1B-201ENST00000376259 PRRX1P54821 245 aa11.64□□□□□ -0.55
TNFRSF1B-201ENST00000376259 ZNF788Q6ZQV5 615 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms