RNA–Protein interactions for RNA: ENST00000376237.8

HLA-C-202, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,538 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-202ENST00000376237 ZP3P21754 424 aa17.64■□□□□ 0.41
HLA-C-202ENST00000376237 Q6ZRG5 221 aa17.64■□□□□ 0.41
HLA-C-202ENST00000376237 DPF1Q92782 380 aa17.64■□□□□ 0.41
HLA-C-202ENST00000376237 OR2C1O95371 312 aa17.63■□□□□ 0.41
HLA-C-202ENST00000376237 TSPAN15O95858 294 aa17.63■□□□□ 0.41
HLA-C-202ENST00000376237 B2MP61769 119 aa17.63■□□□□ 0.41
HLA-C-202ENST00000376237 PXDC1Q5TGL8 231 aa17.63■□□□□ 0.41
HLA-C-202ENST00000376237 MIC13Q5XKP0 118 aa17.63■□□□□ 0.41
HLA-C-202ENST00000376237 C8orf86Q6ZUL3 223 aa17.63■□□□□ 0.41
HLA-C-202ENST00000376237 STPG3Q8N7X2 389 aa17.63■□□□□ 0.41
HLA-C-202ENST00000376237 OR11H1Q8NG94 326 aa17.63■□□□□ 0.41
HLA-C-202ENST00000376237 OR1N2Q8NGR9 330 aa17.63■□□□□ 0.41
HLA-C-202ENST00000376237 OR2G3Q8NGZ4 309 aa17.63■□□□□ 0.41
HLA-C-202ENST00000376237 PHYHIPLQ96FC7 376 aa17.63■□□□□ 0.41
HLA-C-202ENST00000376237 SLC25A32Q9H2D1 315 aa17.63■□□□□ 0.41
HLA-C-202ENST00000376237 IGHV4OR15-8A0A075B7B6 117 aa17.62■□□□□ 0.41
HLA-C-202ENST00000376237 A0A087WW49 117 aa17.62■□□□□ 0.41
HLA-C-202ENST00000376237 A0A1W2PRX2 142 aa17.62■□□□□ 0.41
HLA-C-202ENST00000376237 LINC01619G3V211 115 aa17.62■□□□□ 0.41
HLA-C-202ENST00000376237 NDUFA4O00483 81 aa17.62■□□□□ 0.41
HLA-C-202ENST00000376237 LINC00869P0C866 280 aa17.62■□□□□ 0.41
HLA-C-202ENST00000376237 RPEL1Q2QD12 228 aa17.62■□□□□ 0.41
HLA-C-202ENST00000376237 TMEM182Q6ZP80 229 aaPredicted RBP17.62■□□□□ 0.41
HLA-C-202ENST00000376237 GPHB5Q86YW7 130 aa17.62■□□□□ 0.41
HLA-C-202ENST00000376237 ZNF747Q9BV97 191 aa17.62■□□□□ 0.41
HLA-C-202ENST00000376237 SH3BGRL3Q9H299 93 aa17.62■□□□□ 0.41
HLA-C-202ENST00000376237 SLC39A9Q9NUM3 307 aa17.62■□□□□ 0.41
HLA-C-202ENST00000376237 PUS1Q9Y606 427 aaKnown RBP eCLIP17.62■□□□□ 0.41
HLA-C-202ENST00000376237 ADARB2-AS1A8MUL3 147 aa17.62■□□□□ 0.41
HLA-C-202ENST00000376237 GATA2P23769 480 aaPredicted RBP17.62■□□□□ 0.41
HLA-C-202ENST00000376237 FAM106AQ4KMX7 169 aa17.62■□□□□ 0.41
HLA-C-202ENST00000376237 C12orf54Q6X4T0 127 aa17.62■□□□□ 0.41
HLA-C-202ENST00000376237 PLP1P60201 277 aa17.61■□□□□ 0.41
HLA-C-202ENST00000376237 HIST2H2BDQ6DRA6 164 aa17.61■□□□□ 0.41
HLA-C-202ENST00000376237 IGHV3-35A0A0C4DH35 117 aa17.6■□□□□ 0.41
HLA-C-202ENST00000376237 WI2-2373I1.2A0A1W2PRP0 233 aa17.6■□□□□ 0.41
HLA-C-202ENST00000376237 YIF1AO95070 293 aa17.6■□□□□ 0.41
HLA-C-202ENST00000376237 MBP02144 154 aa17.6■□□□□ 0.41
HLA-C-202ENST00000376237 IL4P05112 153 aa17.6■□□□□ 0.41
HLA-C-202ENST00000376237 DEFB136Q30KP8 78 aa17.6■□□□□ 0.41
HLA-C-202ENST00000376237 NSUN5P1Q3KNT7 163 aa17.6■□□□□ 0.41
HLA-C-202ENST00000376237 FFAR4Q5NUL3 377 aa17.6■□□□□ 0.41
HLA-C-202ENST00000376237 TOMM20LQ6UXN7 152 aa17.6■□□□□ 0.41
HLA-C-202ENST00000376237 CCL24O00175 119 aa17.59■□□□□ 0.41
HLA-C-202ENST00000376237 HOXD3P31249 432 aaPredicted RBP17.59■□□□□ 0.41
HLA-C-202ENST00000376237 C3orf56Q8N813 242 aa17.59■□□□□ 0.41
HLA-C-202ENST00000376237 RNF125Q96EQ8 232 aa17.59■□□□□ 0.41
HLA-C-202ENST00000376237 ELOA3CA0A087WX78 387 aaPredicted RBP17.58■□□□□ 0.41
HLA-C-202ENST00000376237 UMAD1C9J7I0 102 aa17.58■□□□□ 0.41
HLA-C-202ENST00000376237 FHL3Q13643 280 aa17.58■□□□□ 0.41
HLA-C-202ENST00000376237 ACOT6Q3I5F7 207 aaPredicted RBP17.58■□□□□ 0.41
HLA-C-202ENST00000376237 S100A7AQ86SG5 101 aa17.58■□□□□ 0.41
HLA-C-202ENST00000376237 OR1L4Q8NGR5 311 aa17.58■□□□□ 0.41
HLA-C-202ENST00000376237 TMED6Q8WW62 240 aa17.58■□□□□ 0.41
HLA-C-202ENST00000376237 ZNF414Q96IQ9 312 aa17.58■□□□□ 0.41
HLA-C-202ENST00000376237 RAX2Q96IS3 184 aa17.58■□□□□ 0.41
HLA-C-202ENST00000376237 PFDN5Q99471 154 aa17.58■□□□□ 0.41
HLA-C-202ENST00000376237 RFNGQ9Y644 331 aa17.58■□□□□ 0.41
HLA-C-202ENST00000376237 MYCNOSP40205 109 aa17.57■□□□□ 0.4
HLA-C-202ENST00000376237 LYZP61626 148 aa17.57■□□□□ 0.4
HLA-C-202ENST00000376237 ZFAND3Q9H8U3 227 aa17.57■□□□□ 0.4
HLA-C-202ENST00000376237 LGALS9O00182 355 aa17.57■□□□□ 0.4
HLA-C-202ENST00000376237 HYPMO75409 117 aa17.57■□□□□ 0.4
HLA-C-202ENST00000376237 ORM2P19652 201 aa17.57■□□□□ 0.4
HLA-C-202ENST00000376237 M6PRP20645 277 aa17.57■□□□□ 0.4
HLA-C-202ENST00000376237 S100A7P31151 101 aa17.57■□□□□ 0.4
HLA-C-202ENST00000376237 ELLP55199 621 aaPredicted RBP17.57■□□□□ 0.4
HLA-C-202ENST00000376237 KLF5Q13887 457 aaPredicted RBP17.57■□□□□ 0.4
HLA-C-202ENST00000376237 AKR1C8PQ5T2L2 129 aa17.57■□□□□ 0.4
HLA-C-202ENST00000376237 SHISA2Q6UWI4 295 aa17.57■□□□□ 0.4
HLA-C-202ENST00000376237 C1QL4Q86Z23 238 aa17.57■□□□□ 0.4
HLA-C-202ENST00000376237 GATAD1Q8WUU5 269 aa17.57■□□□□ 0.4
HLA-C-202ENST00000376237 TMEM190Q8WZ59 177 aa17.57■□□□□ 0.4
HLA-C-202ENST00000376237 PBDC1Q9BVG4 233 aa17.57■□□□□ 0.4
HLA-C-202ENST00000376237 DNAJC4Q9NNZ3 241 aa17.57■□□□□ 0.4
HLA-C-202ENST00000376237 COX7A2P2O60397 106 aa17.56■□□□□ 0.4
HLA-C-202ENST00000376237 TEX261Q6UWH6 196 aa17.56■□□□□ 0.4
HLA-C-202ENST00000376237 REC114Q7Z4M0 266 aa17.56■□□□□ 0.4
HLA-C-202ENST00000376237 OR1B1Q8NGR6 318 aa17.56■□□□□ 0.4
HLA-C-202ENST00000376237 RCC1LQ96I51 464 aaKnown RBP17.56■□□□□ 0.4
HLA-C-202ENST00000376237 MRPL27Q9P0M9 148 aaKnown RBP17.56■□□□□ 0.4
HLA-C-202ENST00000376237 PFDN2Q9UHV9 154 aa17.56■□□□□ 0.4
HLA-C-202ENST00000376237 FBN1P35555 2871 aaKnown RBP17.55■□□□□ 0.4
HLA-C-202ENST00000376237 ZNF320A2RRD8 509 aa17.55■□□□□ 0.4
HLA-C-202ENST00000376237 K7EMT4 169 aa17.55■□□□□ 0.4
HLA-C-202ENST00000376237 OR5G3P0C626 314 aa17.55■□□□□ 0.4
HLA-C-202ENST00000376237 RAB5CP51148 216 aa17.55■□□□□ 0.4
HLA-C-202ENST00000376237 USF2Q15853 346 aaPredicted RBP17.55■□□□□ 0.4
HLA-C-202ENST00000376237 OR4F17Q8NGA8 305 aa17.55■□□□□ 0.4
HLA-C-202ENST00000376237 DUX3Q96PT4 197 aa17.55■□□□□ 0.4
HLA-C-202ENST00000376237 OR4F4Q96R69 305 aa17.55■□□□□ 0.4
HLA-C-202ENST00000376237 RNF2Q99496 336 aa17.55■□□□□ 0.4
HLA-C-202ENST00000376237 C20orf24Q9BUV8 137 aa17.55■□□□□ 0.4
HLA-C-202ENST00000376237 RABAC1Q9UI14 185 aa17.55■□□□□ 0.4
HLA-C-202ENST00000376237 UFC1Q9Y3C8 167 aa17.55■□□□□ 0.4
HLA-C-202ENST00000376237 TMEM41BQ5BJD5 291 aa17.54■□□□□ 0.4
HLA-C-202ENST00000376237 C10orf113Q5VZT2 155 aa17.54■□□□□ 0.4
HLA-C-202ENST00000376237 UNQ9165/PRO28630Q6UXU0 137 aa17.54■□□□□ 0.4
HLA-C-202ENST00000376237 OR10G4Q8NGN3 311 aa17.54■□□□□ 0.4
HLA-C-202ENST00000376237 OR10G9Q8NGN4 311 aa17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms