RNA–Protein interactions for RNA: ENST00000375427.4

SCN2A-202, Transcript of sodium voltage-gated channel alpha subunit 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN2A, Length 8,553 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2A-202ENST00000375427 IGHV4OR15-8A0A075B7B6 117 aa4.99□□□□□ -1.61
SCN2A-202ENST00000375427 A0A087WW49 117 aa4.99□□□□□ -1.61
SCN2A-202ENST00000375427 ETV2O00321 342 aaPredicted RBP4.99□□□□□ -1.61
SCN2A-202ENST00000375427 RPL34P49207 117 aaKnown RBP4.99□□□□□ -1.61
SCN2A-202ENST00000375427 NDUFV3P56181 108 aaKnown RBP4.99□□□□□ -1.61
SCN2A-202ENST00000375427 NANOS3P60323 173 aaKnown RBP4.99□□□□□ -1.61
SCN2A-202ENST00000375427 BSPH1Q075Z2 132 aa4.99□□□□□ -1.61
SCN2A-202ENST00000375427 C4orf45Q96LM5 186 aa4.99□□□□□ -1.61
SCN2A-202ENST00000375427 MST1RQ04912 1400 aa4.99□□□□□ -1.61
SCN2A-202ENST00000375427 TIMP3P35625 211 aa4.99□□□□□ -1.61
SCN2A-202ENST00000375427 DIAPH2-AS1Q14236 149 aa4.99□□□□□ -1.61
SCN2A-202ENST00000375427 COX20Q5RI15 118 aa4.99□□□□□ -1.61
SCN2A-202ENST00000375427 HIST2H2BCQ6DN03 193 aa4.99□□□□□ -1.61
SCN2A-202ENST00000375427 HIST2H2BDQ6DRA6 164 aa4.99□□□□□ -1.61
SCN2A-202ENST00000375427 HCP5Q6MZN7 132 aa4.99□□□□□ -1.61
SCN2A-202ENST00000375427 B9D1Q9UPM9 204 aa4.99□□□□□ -1.61
SCN2A-202ENST00000375427 PTPN13Q12923 2485 aa4.99□□□□□ -1.61
SCN2A-202ENST00000375427 TRGV8A0A0C4DH27 118 aa4.99□□□□□ -1.61
SCN2A-202ENST00000375427 IGKV3D-7A0A0C4DH55 119 aa4.99□□□□□ -1.61
SCN2A-202ENST00000375427 TRBV5-5A0A0J9YX44 114 aa4.99□□□□□ -1.61
SCN2A-202ENST00000375427 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP4.99□□□□□ -1.61
SCN2A-202ENST00000375427 P2RY2P41231 377 aa4.99□□□□□ -1.61
SCN2A-202ENST00000375427 FAM222AQ5U5X8 452 aa4.99□□□□□ -1.61
SCN2A-202ENST00000375427 CEND1Q8N111 149 aa4.99□□□□□ -1.61
SCN2A-202ENST00000375427 MBD3L2Q8NHZ7 208 aaPredicted RBP4.99□□□□□ -1.61
SCN2A-202ENST00000375427 BCL2L10Q9HD36 194 aa4.99□□□□□ -1.61
SCN2A-202ENST00000375427 ABCA6Q8N139 1617 aa4.99□□□□□ -1.61
SCN2A-202ENST00000375427 A0A0G2JK05 382 aa4.98□□□□□ -1.61
SCN2A-202ENST00000375427 H0Y9J4 135 aa4.98□□□□□ -1.61
SCN2A-202ENST00000375427 LY6G6FQ5SQ64 297 aa4.98□□□□□ -1.61
SCN2A-202ENST00000375427 CCL28Q9NRJ3 127 aa4.98□□□□□ -1.61
SCN2A-202ENST00000375427 IGHV4-28A0A0C4DH34 117 aa4.98□□□□□ -1.61
SCN2A-202ENST00000375427 PRSS38A1L453 326 aa4.98□□□□□ -1.61
SCN2A-202ENST00000375427 CGB3P0DN86 165 aa4.98□□□□□ -1.61
SCN2A-202ENST00000375427 GATA1P15976 413 aaPredicted RBP4.98□□□□□ -1.61
SCN2A-202ENST00000375427 TRA2AQ13595 282 aaKnown RBP eCLIP4.98□□□□□ -1.61
SCN2A-202ENST00000375427 FAM219BQ5XKK7 198 aa4.98□□□□□ -1.61
SCN2A-202ENST00000375427 DUSP14O95147 198 aaKnown RBP4.98□□□□□ -1.61
SCN2A-202ENST00000375427 TCRBV5S4A2TA0A5A2 114 aa4.98□□□□□ -1.61
SCN2A-202ENST00000375427 NPSP0C0P6 89 aa4.98□□□□□ -1.61
SCN2A-202ENST00000375427 SCARF2Q96GP6 870 aaPredicted RBP4.98□□□□□ -1.61
SCN2A-202ENST00000375427 FANCD2OSQ96PS1 177 aa4.98□□□□□ -1.61
SCN2A-202ENST00000375427 COL11A1P12107 1806 aaPredicted RBP4.98□□□□□ -1.61
SCN2A-202ENST00000375427 CD55P08174 381 aa4.98□□□□□ -1.61
SCN2A-202ENST00000375427 FGF12P61328 243 aa4.98□□□□□ -1.61
SCN2A-202ENST00000375427 ZNF79Q15937 498 aa4.98□□□□□ -1.61
SCN2A-202ENST00000375427 C1QL3Q5VWW1 255 aa4.98□□□□□ -1.61
SCN2A-202ENST00000375427 CLTCL1P53675 1640 aa4.98□□□□□ -1.61
SCN2A-202ENST00000375427 A0A087WUJ7 227 aa4.98□□□□□ -1.61
SCN2A-202ENST00000375427 TMEM14DPA8MWL7 114 aa4.98□□□□□ -1.61
SCN2A-202ENST00000375427 PRR33A8MZF0 331 aa4.98□□□□□ -1.61
SCN2A-202ENST00000375427 PROB1E7EW31 1015 aa4.98□□□□□ -1.61
SCN2A-202ENST00000375427 PLA2G1BP04054 148 aaKnown RBP4.98□□□□□ -1.61
SCN2A-202ENST00000375427 DSCR4P56555 118 aaPredicted RBP4.98□□□□□ -1.61
SCN2A-202ENST00000375427 CXCL6P80162 114 aa4.98□□□□□ -1.61
SCN2A-202ENST00000375427 MRPS36P82909 103 aaKnown RBP4.98□□□□□ -1.61
SCN2A-202ENST00000375427 NKG7Q16617 165 aa4.98□□□□□ -1.61
SCN2A-202ENST00000375427 ZNF493Q6ZR52 646 aa4.98□□□□□ -1.61
SCN2A-202ENST00000375427 BMPERQ8N8U9 685 aa4.98□□□□□ -1.61
SCN2A-202ENST00000375427 SMRP1Q8NCR6 262 aa4.98□□□□□ -1.61
SCN2A-202ENST00000375427 C8orf49Q96NF6 230 aa4.98□□□□□ -1.61
SCN2A-202ENST00000375427 ZMAT4Q9H898 229 aa4.98□□□□□ -1.61
SCN2A-202ENST00000375427 NBR2O15453 112 aa4.98□□□□□ -1.61
SCN2A-202ENST00000375427 VDAC2P45880 294 aaPredicted RBP4.98□□□□□ -1.61
SCN2A-202ENST00000375427 ZNF134P52741 427 aa4.98□□□□□ -1.61
SCN2A-202ENST00000375427 TMEM30BQ3MIR4 351 aa4.98□□□□□ -1.61
SCN2A-202ENST00000375427 TRPT1Q86TN4 253 aaKnown RBP4.98□□□□□ -1.61
SCN2A-202ENST00000375427 LYPD6Q86Y78 171 aa4.98□□□□□ -1.61
SCN2A-202ENST00000375427 SHISA5Q8N114 240 aa4.98□□□□□ -1.61
SCN2A-202ENST00000375427 ZCCHC11Q5TAX3 1644 aaKnown RBP4.97□□□□□ -1.61
SCN2A-202ENST00000375427 TRAV26-2A0A0B4J265 109 aa4.97□□□□□ -1.61
SCN2A-202ENST00000375427 ZC2HC1BQ5TFG8 222 aa4.97□□□□□ -1.61
SCN2A-202ENST00000375427 AMTNQ6UX39 209 aa4.97□□□□□ -1.61
SCN2A-202ENST00000375427 RNF144BQ7Z419 303 aa4.97□□□□□ -1.61
SCN2A-202ENST00000375427 OSR1Q8TAX0 266 aaPredicted RBP4.97□□□□□ -1.61
SCN2A-202ENST00000375427 DDTLA6NHG4 134 aaPredicted RBP4.97□□□□□ -1.61
SCN2A-202ENST00000375427 NPYP01303 97 aa4.97□□□□□ -1.61
SCN2A-202ENST00000375427 PEAR1Q5VY43 1037 aaPredicted RBP4.97□□□□□ -1.61
SCN2A-202ENST00000375427 Q9H3A6 140 aa4.97□□□□□ -1.61
SCN2A-202ENST00000375427 MRPL27Q9P0M9 148 aaKnown RBP4.97□□□□□ -1.61
SCN2A-202ENST00000375427 HCSTQ9UBK5 93 aa4.97□□□□□ -1.61
SCN2A-202ENST00000375427 C15orf61A6NNL5 157 aa4.97□□□□□ -1.61
SCN2A-202ENST00000375427 CXCL2P19875 107 aa4.97□□□□□ -1.61
SCN2A-202ENST00000375427 UMODL1-AS1Q8N2C9 162 aa4.97□□□□□ -1.61
SCN2A-202ENST00000375427 NUP35Q8NFH5 326 aa4.97□□□□□ -1.61
SCN2A-202ENST00000375427 PRR7Q8TB68 274 aa4.97□□□□□ -1.61
SCN2A-202ENST00000375427 AJAP1Q9UKB5 411 aaPredicted RBP4.97□□□□□ -1.61
SCN2A-202ENST00000375427 TUBGCP6Q96RT7 1819 aa4.97□□□□□ -1.61
SCN2A-202ENST00000375427 TULP4Q9NRJ4 1543 aa4.97□□□□□ -1.61
SCN2A-202ENST00000375427 PSPNO60542 156 aa4.97□□□□□ -1.61
SCN2A-202ENST00000375427 DAND5Q8N907 189 aa4.97□□□□□ -1.61
SCN2A-202ENST00000375427 DEFB105AQ8NG35 78 aa4.97□□□□□ -1.61
SCN2A-202ENST00000375427 IGLL5B9A064 214 aa4.97□□□□□ -1.61
SCN2A-202ENST00000375427 WDR38Q5JTN6 314 aa4.97□□□□□ -1.61
SCN2A-202ENST00000375427 MROH2AA6NES4 1674 aa4.97□□□□□ -1.61
SCN2A-202ENST00000375427 SCO2A0A1W2PP80 73 aa4.97□□□□□ -1.61
SCN2A-202ENST00000375427 F8VVB4 439 aa4.97□□□□□ -1.61
SCN2A-202ENST00000375427 F8VWA3 439 aa4.97□□□□□ -1.61
SCN2A-202ENST00000375427 CCL2P13500 99 aa4.97□□□□□ -1.61
SCN2A-202ENST00000375427 LSM6P62312 80 aaKnown RBP4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms