RNA–Protein interactions for RNA: ENST00000375360.7

PTPDC1-202, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPDC1, Length 4,517 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-202ENST00000375360 VAMP3Q15836 100 aa14.61□□□□□ -0.07
PTPDC1-202ENST00000375360 M0R381 172 aa14.61□□□□□ -0.07
PTPDC1-202ENST00000375360 OCC1Q8TAD7 63 aa14.61□□□□□ -0.07
PTPDC1-202ENST00000375360 ZNF418Q8TF45 676 aaPredicted RBP14.61□□□□□ -0.07
PTPDC1-202ENST00000375360 PMS2P5A8MQ11 134 aa14.61□□□□□ -0.07
PTPDC1-202ENST00000375360 DIRC3C9JPN6 131 aa14.61□□□□□ -0.07
PTPDC1-202ENST00000375360 RNF223E7ERA6 249 aa14.61□□□□□ -0.07
PTPDC1-202ENST00000375360 ZNF600Q6ZNG1 722 aa14.61□□□□□ -0.07
PTPDC1-202ENST00000375360 C11orf53Q8IXP5 236 aa14.61□□□□□ -0.07
PTPDC1-202ENST00000375360 MBD3L1Q8WWY6 194 aa14.61□□□□□ -0.07
PTPDC1-202ENST00000375360 A6NNC1 897 aa14.6□□□□□ -0.07
PTPDC1-202ENST00000375360 DIAPH2-AS1Q14236 149 aa14.6□□□□□ -0.07
PTPDC1-202ENST00000375360 RUSC1-AS1Q66K80 236 aa14.6□□□□□ -0.07
PTPDC1-202ENST00000375360 IGF2-ASQ6U949 168 aa14.6□□□□□ -0.07
PTPDC1-202ENST00000375360 OR4X2Q8NGF9 303 aa14.6□□□□□ -0.07
PTPDC1-202ENST00000375360 GPR82Q96P67 336 aa14.6□□□□□ -0.07
PTPDC1-202ENST00000375360 KLK15Q9H2R5 256 aa14.6□□□□□ -0.07
PTPDC1-202ENST00000375360 TRAV41A0A0B4J266 112 aa14.6□□□□□ -0.07
PTPDC1-202ENST00000375360 RPL15P61313 204 aaKnown RBP14.6□□□□□ -0.07
PTPDC1-202ENST00000375360 SSC4DQ8WTU2 575 aa14.6□□□□□ -0.07
PTPDC1-202ENST00000375360 ANAPC10Q9UM13 185 aa14.6□□□□□ -0.07
PTPDC1-202ENST00000375360 SCRT1Q9BWW7 348 aa14.6□□□□□ -0.07
PTPDC1-202ENST00000375360 A0A0C4DFX4 3053 aa14.59□□□□□ -0.07
PTPDC1-202ENST00000375360 M0R1W7 72 aa14.59□□□□□ -0.07
PTPDC1-202ENST00000375360 FAM159AQ6UWV7 190 aa14.59□□□□□ -0.07
PTPDC1-202ENST00000375360 BRCA2P51587 3418 aa14.59□□□□□ -0.07
PTPDC1-202ENST00000375360 CA1P00915 261 aaPredicted RBP14.59□□□□□ -0.07
PTPDC1-202ENST00000375360 CFHR2P36980 270 aa14.59□□□□□ -0.07
PTPDC1-202ENST00000375360 MINOS1Q5TGZ0 78 aa14.59□□□□□ -0.07
PTPDC1-202ENST00000375360 Q8TCH9 128 aa14.59□□□□□ -0.07
PTPDC1-202ENST00000375360 MINOS1-NBL1R4GNA1 71 aa14.59□□□□□ -0.07
PTPDC1-202ENST00000375360 A0A087X0M5 115 aa14.59□□□□□ -0.07
PTPDC1-202ENST00000375360 A0A1B0GX30 115 aa14.59□□□□□ -0.07
PTPDC1-202ENST00000375360 PVRIGQ6DKI7 326 aa14.59□□□□□ -0.07
PTPDC1-202ENST00000375360 WFDC12Q8WWY7 111 aa14.59□□□□□ -0.07
PTPDC1-202ENST00000375360 DERL1Q9BUN8 251 aa14.59□□□□□ -0.07
PTPDC1-202ENST00000375360 M0QZK8 103 aa14.58□□□□□ -0.07
PTPDC1-202ENST00000375360 STAG3L2P0CL84 134 aa14.58□□□□□ -0.07
PTPDC1-202ENST00000375360 STAG3L3P0CL85 134 aa14.58□□□□□ -0.07
PTPDC1-202ENST00000375360 ITLN2Q8WWU7 325 aaPredicted RBP14.58□□□□□ -0.07
PTPDC1-202ENST00000375360 MOB4Q9Y3A3 225 aa14.58□□□□□ -0.07
PTPDC1-202ENST00000375360 SRSF4Q08170 494 aaKnown RBP14.58□□□□□ -0.08
PTPDC1-202ENST00000375360 EPDR1Q9UM22 224 aa14.58□□□□□ -0.08
PTPDC1-202ENST00000375360 PTPRSQ13332 1948 aa14.58□□□□□ -0.08
PTPDC1-202ENST00000375360 A0A1W2PPI3 338 aa14.58□□□□□ -0.08
PTPDC1-202ENST00000375360 SMIM6P0DI80 62 aa14.58□□□□□ -0.08
PTPDC1-202ENST00000375360 CD33P20138 364 aa14.58□□□□□ -0.08
PTPDC1-202ENST00000375360 MYOZ3Q8TDC0 251 aa14.58□□□□□ -0.08
PTPDC1-202ENST00000375360 ELOVL1Q9BW60 279 aa14.58□□□□□ -0.08
PTPDC1-202ENST00000375360 ZNF106Q9H2Y7 1883 aaKnown RBP14.58□□□□□ -0.08
PTPDC1-202ENST00000375360 EXOC3-AS1Q8N2X6 119 aa14.58□□□□□ -0.08
PTPDC1-202ENST00000375360 LAMA3Q16787 3333 aa14.57□□□□□ -0.08
PTPDC1-202ENST00000375360 C15orf65H3BRN8 121 aa14.57□□□□□ -0.08
PTPDC1-202ENST00000375360 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP14.57□□□□□ -0.08
PTPDC1-202ENST00000375360 RNASE2P10153 161 aaKnown RBP14.57□□□□□ -0.08
PTPDC1-202ENST00000375360 C3orf36Q3SXR2 165 aa14.57□□□□□ -0.08
PTPDC1-202ENST00000375360 C5orf42Q9H799 3197 aa14.57□□□□□ -0.08
PTPDC1-202ENST00000375360 G0S2P27469 103 aa14.57□□□□□ -0.08
PTPDC1-202ENST00000375360 TCF24Q7RTU0 167 aa14.57□□□□□ -0.08
PTPDC1-202ENST00000375360 AGMATQ9BSE5 352 aa14.57□□□□□ -0.08
PTPDC1-202ENST00000375360 IL36BQ9NZH7 164 aa14.57□□□□□ -0.08
PTPDC1-202ENST00000375360 LRRK2Q5S007 2527 aa14.57□□□□□ -0.08
PTPDC1-202ENST00000375360 A0A1W2PRE2 83 aa14.57□□□□□ -0.08
PTPDC1-202ENST00000375360 CD5P06127 495 aa14.57□□□□□ -0.08
PTPDC1-202ENST00000375360 RAX2Q96IS3 184 aa14.57□□□□□ -0.08
PTPDC1-202ENST00000375360 A0A1B0GWJ7 208 aa14.56□□□□□ -0.08
PTPDC1-202ENST00000375360 SHISA9B4DS77 424 aa14.56□□□□□ -0.08
PTPDC1-202ENST00000375360 TCF23Q7RTU1 214 aa14.56□□□□□ -0.08
PTPDC1-202ENST00000375360 F11RQ9Y624 299 aaKnown RBP14.56□□□□□ -0.08
PTPDC1-202ENST00000375360 PPIFP30405 207 aaKnown RBP14.56□□□□□ -0.08
PTPDC1-202ENST00000375360 PAX8Q06710 450 aa14.56□□□□□ -0.08
PTPDC1-202ENST00000375360 HSPB8Q9UJY1 196 aa14.56□□□□□ -0.08
PTPDC1-202ENST00000375360 HIGD1CA8MV81 97 aa14.56□□□□□ -0.08
PTPDC1-202ENST00000375360 VDAC2P45880 294 aaPredicted RBP14.56□□□□□ -0.08
PTPDC1-202ENST00000375360 IGFBPL1Q8WX77 278 aa14.56□□□□□ -0.08
PTPDC1-202ENST00000375360 ABCA12Q86UK0 2595 aa14.56□□□□□ -0.08
PTPDC1-202ENST00000375360 HTTP42858 3142 aa14.56□□□□□ -0.08
PTPDC1-202ENST00000375360 TMEM8BA6NDV4 472 aa14.56□□□□□ -0.08
PTPDC1-202ENST00000375360 LEPROTL1O95214 131 aa14.56□□□□□ -0.08
PTPDC1-202ENST00000375360 PRR31Q5SQ13 230 aa14.56□□□□□ -0.08
PTPDC1-202ENST00000375360 CHD7Q9P2D1 2997 aa14.55□□□□□ -0.08
PTPDC1-202ENST00000375360 PAX9P55771 341 aa14.55□□□□□ -0.08
PTPDC1-202ENST00000375360 DSCR9P59020 149 aa14.55□□□□□ -0.08
PTPDC1-202ENST00000375360 HBBP68871 147 aa14.55□□□□□ -0.08
PTPDC1-202ENST00000375360 NDPQ00604 133 aa14.55□□□□□ -0.08
PTPDC1-202ENST00000375360 C8orf46Q8TAG6 207 aa14.55□□□□□ -0.08
PTPDC1-202ENST00000375360 TAS2R60P59551 318 aa14.55□□□□□ -0.08
PTPDC1-202ENST00000375360 C19orf35Q6ZS72 473 aa14.55□□□□□ -0.08
PTPDC1-202ENST00000375360 ATG101Q9BSB4 218 aa14.55□□□□□ -0.08
PTPDC1-202ENST00000375360 KIAA1549LQ6ZVL6 1849 aa14.55□□□□□ -0.08
PTPDC1-202ENST00000375360 TMEM131Q92545 1883 aa14.55□□□□□ -0.08
PTPDC1-202ENST00000375360 OOSP1A8MZH6 123 aa14.54□□□□□ -0.08
PTPDC1-202ENST00000375360 PLXNB1O43157 2135 aa14.54□□□□□ -0.08
PTPDC1-202ENST00000375360 RPS20P60866 119 aaKnown RBP14.54□□□□□ -0.08
PTPDC1-202ENST00000375360 RRN3P1Q2M238 152 aa14.54□□□□□ -0.08
PTPDC1-202ENST00000375360 IGFL4Q6B9Z1 124 aa14.54□□□□□ -0.08
PTPDC1-202ENST00000375360 SCGB1D4Q6XE38 83 aa14.54□□□□□ -0.08
PTPDC1-202ENST00000375360 ATOH7Q8N100 152 aa14.54□□□□□ -0.08
PTPDC1-202ENST00000375360 TPSG1Q9NRR2 321 aa14.54□□□□□ -0.08
PTPDC1-202ENST00000375360 CTSZQ9UBR2 303 aa14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms