RNA–Protein interactions for RNA: ENST00000374877.7

CCDC40-203, Transcript of coiled-coil domain containing 40, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CCDC40, Length 3,544 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-203ENST00000374877 ZNF137PP52743 207 aa8.96□□□□□ -0.98
CCDC40-203ENST00000374877 LINC00173Q6ZV60 143 aa8.96□□□□□ -0.98
CCDC40-203ENST00000374877 RPRMLQ8N4K4 120 aa8.96□□□□□ -0.98
CCDC40-203ENST00000374877 RNF24Q9Y225 148 aa8.96□□□□□ -0.98
CCDC40-203ENST00000374877 IGHV2-70DA0A0C4DH43 119 aa8.95□□□□□ -0.98
CCDC40-203ENST00000374877 CFHR2P36980 270 aa8.95□□□□□ -0.98
CCDC40-203ENST00000374877 BPIFB3P59826 476 aa8.95□□□□□ -0.98
CCDC40-203ENST00000374877 C10orf55Q5SWW7 151 aa8.95□□□□□ -0.98
CCDC40-203ENST00000374877 ZNF841Q6ZN19 808 aa8.95□□□□□ -0.98
CCDC40-203ENST00000374877 BHLHA15Q7RTS1 189 aaPredicted RBP8.95□□□□□ -0.98
CCDC40-203ENST00000374877 SSX8Q7RTT4 187 aa8.95□□□□□ -0.98
CCDC40-203ENST00000374877 OR1L4Q8NGR5 311 aa8.95□□□□□ -0.98
CCDC40-203ENST00000374877 ZNF714Q96N38 554 aa8.95□□□□□ -0.98
CCDC40-203ENST00000374877 ABCA1O95477 2261 aa8.95□□□□□ -0.98
CCDC40-203ENST00000374877 E7EUB6 86 aa8.95□□□□□ -0.98
CCDC40-203ENST00000374877 HBBP68871 147 aa8.95□□□□□ -0.98
CCDC40-203ENST00000374877 PATE2Q6UY27 113 aa8.95□□□□□ -0.98
CCDC40-203ENST00000374877 PDPNQ86YL7 162 aa8.95□□□□□ -0.98
CCDC40-203ENST00000374877 CACNG8Q8WXS5 425 aa8.95□□□□□ -0.98
CCDC40-203ENST00000374877 URB1-AS1Q96HZ7 61 aa8.95□□□□□ -0.98
CCDC40-203ENST00000374877 ZNF430Q9H8G1 570 aaPredicted RBP8.95□□□□□ -0.98
CCDC40-203ENST00000374877 ANKRD11Q6UB99 2663 aaPredicted RBP8.95□□□□□ -0.98
CCDC40-203ENST00000374877 PLXNB1O43157 2135 aa8.95□□□□□ -0.98
CCDC40-203ENST00000374877 NUDT3O95989 172 aa8.94□□□□□ -0.98
CCDC40-203ENST00000374877 ORM2P19652 201 aa8.94□□□□□ -0.98
CCDC40-203ENST00000374877 ATP5IP56385 69 aaPredicted RBP8.94□□□□□ -0.98
CCDC40-203ENST00000374877 LINC00305Q7Z4B0 112 aa8.94□□□□□ -0.98
CCDC40-203ENST00000374877 FXYD5Q96DB9 178 aa8.94□□□□□ -0.98
CCDC40-203ENST00000374877 PGLYRP4Q96LB8 373 aa8.94□□□□□ -0.98
CCDC40-203ENST00000374877 VKORC1Q9BQB6 163 aa8.94□□□□□ -0.98
CCDC40-203ENST00000374877 MRPL20Q9BYC9 149 aaKnown RBP8.94□□□□□ -0.98
CCDC40-203ENST00000374877 FNDC4Q9H6D8 234 aaPredicted RBP8.94□□□□□ -0.98
CCDC40-203ENST00000374877 PGPA6NDG6 321 aa8.94□□□□□ -0.98
CCDC40-203ENST00000374877 K7EP13 123 aa8.94□□□□□ -0.98
CCDC40-203ENST00000374877 LEPROTL1O95214 131 aa8.94□□□□□ -0.98
CCDC40-203ENST00000374877 APOA2P02652 100 aa8.94□□□□□ -0.98
CCDC40-203ENST00000374877 MCRIP2Q9BUT9 160 aaKnown RBP8.94□□□□□ -0.98
CCDC40-203ENST00000374877 DSCAML1Q8TD84 2053 aa8.94□□□□□ -0.98
CCDC40-203ENST00000374877 ASPMQ8IZT6 3477 aa8.94□□□□□ -0.98
CCDC40-203ENST00000374877 ROS1P08922 2347 aa8.94□□□□□ -0.98
CCDC40-203ENST00000374877 ZFHX4Q86UP3 3567 aa8.94□□□□□ -0.98
CCDC40-203ENST00000374877 H3BTX0 84 aa8.94□□□□□ -0.98
CCDC40-203ENST00000374877 LHBP01229 141 aa8.94□□□□□ -0.98
CCDC40-203ENST00000374877 COTL1Q14019 142 aa8.94□□□□□ -0.98
CCDC40-203ENST00000374877 C3orf36Q3SXR2 165 aa8.94□□□□□ -0.98
CCDC40-203ENST00000374877 ETFRF1Q6IPR1 90 aa8.94□□□□□ -0.98
CCDC40-203ENST00000374877 SLC25A48Q6ZT89 311 aaKnown RBP8.94□□□□□ -0.98
CCDC40-203ENST00000374877 ATP5L2Q7Z4Y8 100 aa8.94□□□□□ -0.98
CCDC40-203ENST00000374877 IGHV1-24A0A0C4DH33 117 aa8.93□□□□□ -0.98
CCDC40-203ENST00000374877 A0A0G2JNJ9 132 aa8.93□□□□□ -0.98
CCDC40-203ENST00000374877 HSBP1L1C9JCN9 74 aa8.93□□□□□ -0.98
CCDC40-203ENST00000374877 SYS1-DBNDD2H3BUS1 97 aa8.93□□□□□ -0.98
CCDC40-203ENST00000374877 SAPCD1Q5SSQ6 148 aa8.93□□□□□ -0.98
CCDC40-203ENST00000374877 ZNF474Q6S9Z5 364 aaPredicted RBP8.93□□□□□ -0.98
CCDC40-203ENST00000374877 NDUFA4L2Q9NRX3 87 aa8.93□□□□□ -0.98
CCDC40-203ENST00000374877 RNF7Q9UBF6 113 aa8.93□□□□□ -0.98
CCDC40-203ENST00000374877 Q9UFV3 132 aa8.93□□□□□ -0.98
CCDC40-203ENST00000374877 RPUSD1Q9UJJ7 312 aaKnown RBP8.93□□□□□ -0.98
CCDC40-203ENST00000374877 EPDR1Q9UM22 224 aa8.93□□□□□ -0.98
CCDC40-203ENST00000374877 A0A1B0GXF2 115 aa8.93□□□□□ -0.98
CCDC40-203ENST00000374877 CBY3A6NI87 242 aa8.93□□□□□ -0.98
CCDC40-203ENST00000374877 MOSP00540 346 aa8.93□□□□□ -0.98
CCDC40-203ENST00000374877 OR1B1Q8NGR6 318 aa8.93□□□□□ -0.98
CCDC40-203ENST00000374877 RPP21Q9H633 154 aaKnown RBP8.93□□□□□ -0.98
CCDC40-203ENST00000374877 JKAMPQ9P055 326 aa8.93□□□□□ -0.98
CCDC40-203ENST00000374877 TANC2Q9HCD6 1990 aa8.93□□□□□ -0.98
CCDC40-203ENST00000374877 IGF2RP11717 2491 aa8.93□□□□□ -0.98
CCDC40-203ENST00000374877 TCRBV4S1A1TA0A5B7 111 aa8.93□□□□□ -0.98
CCDC40-203ENST00000374877 P01737 135 aa8.93□□□□□ -0.98
CCDC40-203ENST00000374877 CDKN1BP46527 198 aa8.93□□□□□ -0.98
CCDC40-203ENST00000374877 ANKRD39Q53RE8 183 aa8.93□□□□□ -0.98
CCDC40-203ENST00000374877 FAM120AOSQ5T036 256 aa8.93□□□□□ -0.98
CCDC40-203ENST00000374877 LINC00322Q6ZN03 302 aaPredicted RBP8.93□□□□□ -0.98
CCDC40-203ENST00000374877 GAFA1Q96PS6 74 aa8.93□□□□□ -0.98
CCDC40-203ENST00000374877 ST20Q9HBF5 79 aa8.93□□□□□ -0.98
CCDC40-203ENST00000374877 MRPL36Q9P0J6 103 aaKnown RBP8.93□□□□□ -0.98
CCDC40-203ENST00000374877 SLC25A15Q9Y619 301 aa8.93□□□□□ -0.98
CCDC40-203ENST00000374877 ZNF138P52744 262 aa8.92□□□□□ -0.98
CCDC40-203ENST00000374877 WT1-ASQ06250 92 aa8.92□□□□□ -0.98
CCDC40-203ENST00000374877 TMEM177Q53S58 311 aa8.92□□□□□ -0.98
CCDC40-203ENST00000374877 LRRC10Q5BKY1 277 aa8.92□□□□□ -0.98
CCDC40-203ENST00000374877 TIMM23BQ5SRD1 257 aa8.92□□□□□ -0.98
CCDC40-203ENST00000374877 FAM162BQ5T6X4 162 aa8.92□□□□□ -0.98
CCDC40-203ENST00000374877 SLC25A34Q6PIV7 304 aa8.92□□□□□ -0.98
CCDC40-203ENST00000374877 GPR82Q96P67 336 aa8.92□□□□□ -0.98
CCDC40-203ENST00000374877 C7orf69Q9H7B7 122 aa8.92□□□□□ -0.98
CCDC40-203ENST00000374877 TRAV30A0A087WSZ9 112 aa8.92□□□□□ -0.98
CCDC40-203ENST00000374877 A8MWL6 223 aa8.92□□□□□ -0.98
CCDC40-203ENST00000374877 TNFAIP6P98066 277 aaPredicted RBP8.92□□□□□ -0.98
CCDC40-203ENST00000374877 OSR1Q8TAX0 266 aaPredicted RBP8.92□□□□□ -0.98
CCDC40-203ENST00000374877 DAZAP1Q96EP5 407 aaKnown RBP8.92□□□□□ -0.98
CCDC40-203ENST00000374877 TMEM191AQ9H0A3 160 aa8.92□□□□□ -0.98
CCDC40-203ENST00000374877 NCOR2Q9Y618 2525 aa8.92□□□□□ -0.98
CCDC40-203ENST00000374877 MUC21A0A0G2JKD1 596 aa8.92□□□□□ -0.98
CCDC40-203ENST00000374877 MUC21A0A140T8X8 626 aa8.92□□□□□ -0.98
CCDC40-203ENST00000374877 OR2T8A6NH00 312 aa8.92□□□□□ -0.98
CCDC40-203ENST00000374877 CHEK1O14757 476 aa8.92□□□□□ -0.98
CCDC40-203ENST00000374877 MUC21Q5SSG8 566 aa8.92□□□□□ -0.98
CCDC40-203ENST00000374877 GTSF1Q8WW33 167 aa8.92□□□□□ -0.98
CCDC40-203ENST00000374877 FLYWCH2Q96CP2 140 aaKnown RBP8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms