RNA–Protein interactions for RNA: ENST00000374730.2

USP48-202, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 4

Gene USP48, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-202ENST00000374730 PLEKHA3Q9HB20 300 aa3.82□□□□□ -1.8
USP48-202ENST00000374730 NGBQ9NPG2 151 aa3.82□□□□□ -1.8
USP48-202ENST00000374730 TMEM106BQ9NUM4 274 aa3.82□□□□□ -1.8
USP48-202ENST00000374730 FKBP11Q9NYL4 201 aa3.82□□□□□ -1.8
USP48-202ENST00000374730 KAAG1Q9UBP8 84 aa3.82□□□□□ -1.8
USP48-202ENST00000374730 PPIAL4AQ9Y536 164 aa3.82□□□□□ -1.8
USP48-202ENST00000374730 OR51B2Q9Y5P1 312 aa3.82□□□□□ -1.8
USP48-202ENST00000374730 IGHV4OR15-8A0A075B7B6 117 aa3.81□□□□□ -1.8
USP48-202ENST00000374730 SHISA9B4DS77 424 aa3.81□□□□□ -1.8
USP48-202ENST00000374730 H0YJW9 148 aa3.81□□□□□ -1.8
USP48-202ENST00000374730 J3QR06 171 aa3.81□□□□□ -1.8
USP48-202ENST00000374730 K7ENP7 123 aa3.81□□□□□ -1.8
USP48-202ENST00000374730 VCYO14598 125 aa3.81□□□□□ -1.8
USP48-202ENST00000374730 PPP1R2P9O14990 202 aa3.81□□□□□ -1.8
USP48-202ENST00000374730 NDUFB3O43676 98 aa3.81□□□□□ -1.8
USP48-202ENST00000374730 GGCTO75223 188 aaKnown RBP3.81□□□□□ -1.8
USP48-202ENST00000374730 FCN3O75636 299 aa3.81□□□□□ -1.8
USP48-202ENST00000374730 MMP23AO75900 390 aa3.81□□□□□ -1.8
USP48-202ENST00000374730 FSTL3O95633 263 aa3.81□□□□□ -1.8
USP48-202ENST00000374730 MT-CO2P00403 227 aa3.81□□□□□ -1.8
USP48-202ENST00000374730 CA2P00918 260 aa3.81□□□□□ -1.8
USP48-202ENST00000374730 IGHV3-7P01780 117 aa3.81□□□□□ -1.8
USP48-202ENST00000374730 TRGC2P03986 189 aa3.81□□□□□ -1.8
USP48-202ENST00000374730 TYMSP04818 313 aa3.81□□□□□ -1.8
USP48-202ENST00000374730 AREGP15514 252 aa3.81□□□□□ -1.8
USP48-202ENST00000374730 NPPCP23582 126 aa3.81□□□□□ -1.8
USP48-202ENST00000374730 S100PP25815 95 aa3.81□□□□□ -1.8
USP48-202ENST00000374730 SRP14P37108 136 aaKnown RBP3.81□□□□□ -1.8
USP48-202ENST00000374730 GALR1P47211 349 aa3.81□□□□□ -1.8
USP48-202ENST00000374730 DLX6P56179 175 aa3.81□□□□□ -1.8
USP48-202ENST00000374730 B2MP61769 119 aa3.81□□□□□ -1.8
USP48-202ENST00000374730 RHOBP62745 196 aa3.81□□□□□ -1.8
USP48-202ENST00000374730 GNB1P62873 340 aa3.81□□□□□ -1.8
USP48-202ENST00000374730 RPL31P62899 125 aaKnown RBP3.81□□□□□ -1.8
USP48-202ENST00000374730 CCL8P80075 99 aa3.81□□□□□ -1.8
USP48-202ENST00000374730 GAGE2BQ13066 116 aa3.81□□□□□ -1.8
USP48-202ENST00000374730 FBXL19-AS1Q494R0 122 aa3.81□□□□□ -1.8
USP48-202ENST00000374730 GAGE2EQ4V326 116 aa3.81□□□□□ -1.8
USP48-202ENST00000374730 C2orf83Q53S99 150 aa3.81□□□□□ -1.8
USP48-202ENST00000374730 GCSAMLQ5JQS6 135 aa3.81□□□□□ -1.8
USP48-202ENST00000374730 DNLZQ5SXM8 178 aa3.81□□□□□ -1.8
USP48-202ENST00000374730 NCMAPQ5T1S8 102 aa3.81□□□□□ -1.8
USP48-202ENST00000374730 MIC13Q5XKP0 118 aa3.81□□□□□ -1.8
USP48-202ENST00000374730 GAGE2AQ6NT46 116 aa3.81□□□□□ -1.8
USP48-202ENST00000374730 C9orf139Q6ZV77 190 aa3.81□□□□□ -1.8
USP48-202ENST00000374730 TMEM144Q7Z5S9 345 aa3.81□□□□□ -1.8
USP48-202ENST00000374730 SMIM29Q86T20 159 aa3.81□□□□□ -1.8
USP48-202ENST00000374730 PDPNQ86YL7 162 aa3.81□□□□□ -1.8
USP48-202ENST00000374730 PNKDQ8N490 385 aa3.81□□□□□ -1.8
USP48-202ENST00000374730 OR51G1Q8NGK1 321 aa3.81□□□□□ -1.8
USP48-202ENST00000374730 VSTM2AQ8TAG5 236 aa3.81□□□□□ -1.8
USP48-202ENST00000374730 TMEM167AQ8TBQ9 72 aa3.81□□□□□ -1.8
USP48-202ENST00000374730 RNASE6Q93091 150 aaKnown RBP3.81□□□□□ -1.8
USP48-202ENST00000374730 C11orf52Q96A22 123 aa3.81□□□□□ -1.8
USP48-202ENST00000374730 BTF3L4Q96K17 158 aa3.81□□□□□ -1.8
USP48-202ENST00000374730 SLC35E1Q96K37 410 aa3.81□□□□□ -1.8
USP48-202ENST00000374730 OR5B12Q96R08 314 aa3.81□□□□□ -1.8
USP48-202ENST00000374730 IMMP2LQ96T52 175 aa3.81□□□□□ -1.8
USP48-202ENST00000374730 GAGE2DQ9UEU5 116 aa3.81□□□□□ -1.8
USP48-202ENST00000374730 URGCP-MRPS24S4R325 110 aa3.81□□□□□ -1.8
USP48-202ENST00000374730 SPTBN2O15020 2390 aa3.81□□□□□ -1.8
USP48-202ENST00000374730 NAV3Q8IVL0 2385 aa3.81□□□□□ -1.8
USP48-202ENST00000374730 ROS1P08922 2347 aa3.81□□□□□ -1.8
USP48-202ENST00000374730 ZZEF1O43149 2961 aa3.81□□□□□ -1.8
USP48-202ENST00000374730 PKDREJQ9NTG1 2253 aa3.81□□□□□ -1.8
USP48-202ENST00000374730 ANKHD1Q8IWZ3 2542 aaKnown RBP3.8□□□□□ -1.8
USP48-202ENST00000374730 TEX50A0A1B0GTY4 177 aa3.8□□□□□ -1.8
USP48-202ENST00000374730 A0A1W2PN81 502 aa3.8□□□□□ -1.8
USP48-202ENST00000374730 SRRM4A7MD48 611 aaKnown RBP3.8□□□□□ -1.8
USP48-202ENST00000374730 C9JCJ5 164 aa3.8□□□□□ -1.8
USP48-202ENST00000374730 E7EQL1 145 aa3.8□□□□□ -1.8
USP48-202ENST00000374730 IGKV1-16P04430 117 aa3.8□□□□□ -1.8
USP48-202ENST00000374730 LINC00869P0C866 280 aa3.8□□□□□ -1.8
USP48-202ENST00000374730 TRGC1P0CF51 173 aa3.8□□□□□ -1.8
USP48-202ENST00000374730 SAA1P0DJI8 122 aaPredicted RBP3.8□□□□□ -1.8
USP48-202ENST00000374730 ARL14EPLP0DKL9 152 aa3.8□□□□□ -1.8
USP48-202ENST00000374730 RNASE2P10153 161 aaKnown RBP3.8□□□□□ -1.8
USP48-202ENST00000374730 SFTPCP11686 197 aa3.8□□□□□ -1.8
USP48-202ENST00000374730 DEFA4P12838 97 aa3.8□□□□□ -1.8
USP48-202ENST00000374730 MYOD1P15172 320 aa3.8□□□□□ -1.8
USP48-202ENST00000374730 CCL3L1P16619 93 aa3.8□□□□□ -1.8
USP48-202ENST00000374730 USF1P22415 310 aaPredicted RBP3.8□□□□□ -1.8
USP48-202ENST00000374730 IL3RAP26951 378 aa3.8□□□□□ -1.8
USP48-202ENST00000374730 LOXP28300 417 aaPredicted RBP3.8□□□□□ -1.8
USP48-202ENST00000374730 GCHFRP30047 84 aa3.8□□□□□ -1.8
USP48-202ENST00000374730 CHRNA7P36544 502 aa3.8□□□□□ -1.8
USP48-202ENST00000374730 GPX4P36969 197 aaPredicted RBP3.8□□□□□ -1.8
USP48-202ENST00000374730 IER3P46695 156 aa3.8□□□□□ -1.8
USP48-202ENST00000374730 ATP5G3P48201 142 aa3.8□□□□□ -1.8
USP48-202ENST00000374730 NDUFA6P56556 154 aa3.8□□□□□ -1.8
USP48-202ENST00000374730 CTAG1AP78358 180 aa3.8□□□□□ -1.8
USP48-202ENST00000374730 LCN2P80188 198 aa3.8□□□□□ -1.8
USP48-202ENST00000374730 TMEM155Q4W5P6 130 aa3.8□□□□□ -1.8
USP48-202ENST00000374730 LRRC10Q5BKY1 277 aa3.8□□□□□ -1.8
USP48-202ENST00000374730 COA6Q5JTJ3 125 aaKnown RBP3.8□□□□□ -1.8
USP48-202ENST00000374730 KCNIP4Q6PIL6 250 aa3.8□□□□□ -1.8
USP48-202ENST00000374730 SLC16A13Q7RTY0 426 aa3.8□□□□□ -1.8
USP48-202ENST00000374730 LINC01551Q86U37 167 aa3.8□□□□□ -1.8
USP48-202ENST00000374730 HIST3H2BBQ8N257 126 aa3.8□□□□□ -1.8
USP48-202ENST00000374730 OR9G1Q8NH87 305 aa3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms