RNA–Protein interactions for RNA: ENST00000373887.7

TRAF1-201, Transcript of TNF receptor associated factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF1, Length 6,324 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-201ENST00000373887 UCP1P25874 307 aa11.86□□□□□ -0.51
TRAF1-201ENST00000373887 ORMDL2Q53FV1 153 aa11.86□□□□□ -0.51
TRAF1-201ENST00000373887 DEFB121Q5J5C9 76 aa11.86□□□□□ -0.51
TRAF1-201ENST00000373887 LINC00312Q9Y6C7 94 aa11.86□□□□□ -0.51
TRAF1-201ENST00000373887 ERVK11-1P61568 191 aa11.85□□□□□ -0.51
TRAF1-201ENST00000373887 ZNF672Q499Z4 452 aaPredicted RBP11.85□□□□□ -0.51
TRAF1-201ENST00000373887 TRGV11A0A075B6L2 103 aa11.85□□□□□ -0.51
TRAF1-201ENST00000373887 TRAV5A0A0B4J249 113 aa11.85□□□□□ -0.51
TRAF1-201ENST00000373887 DTX2Q86UW9 622 aa11.85□□□□□ -0.51
TRAF1-201ENST00000373887 DUSP14O95147 198 aaKnown RBP11.85□□□□□ -0.51
TRAF1-201ENST00000373887 CACNG8Q8WXS5 425 aa11.85□□□□□ -0.51
TRAF1-201ENST00000373887 PRSS22Q9GZN4 317 aa11.85□□□□□ -0.51
TRAF1-201ENST00000373887 ANK1P16157 1881 aa11.85□□□□□ -0.51
TRAF1-201ENST00000373887 CCL20P78556 96 aa11.85□□□□□ -0.51
TRAF1-201ENST00000373887 ZNF474Q6S9Z5 364 aaPredicted RBP11.85□□□□□ -0.51
TRAF1-201ENST00000373887 LGALS1P09382 135 aaKnown RBP11.84□□□□□ -0.51
TRAF1-201ENST00000373887 GAGE2BQ13066 116 aa11.84□□□□□ -0.51
TRAF1-201ENST00000373887 THSD7BQ9C0I4 1608 aa11.84□□□□□ -0.51
TRAF1-201ENST00000373887 PAQR4Q8N4S7 273 aaPredicted RBP11.84□□□□□ -0.51
TRAF1-201ENST00000373887 C18orf12Q96KH6 178 aa11.84□□□□□ -0.51
TRAF1-201ENST00000373887 SHISA3A0PJX4 238 aa11.84□□□□□ -0.51
TRAF1-201ENST00000373887 PSCAO43653 123 aa11.84□□□□□ -0.51
TRAF1-201ENST00000373887 SIGLEC15Q6ZMC9 328 aa11.84□□□□□ -0.51
TRAF1-201ENST00000373887 SPTBN2O15020 2390 aa11.84□□□□□ -0.51
TRAF1-201ENST00000373887 SELLP14151 372 aa11.84□□□□□ -0.51
TRAF1-201ENST00000373887 MORN3Q6PF18 240 aaPredicted RBP11.84□□□□□ -0.51
TRAF1-201ENST00000373887 LINC00114Q6XXX2 140 aa11.84□□□□□ -0.51
TRAF1-201ENST00000373887 VMO1Q7Z5L0 202 aa11.84□□□□□ -0.51
TRAF1-201ENST00000373887 RNF222A6NCQ9 220 aa11.84□□□□□ -0.51
TRAF1-201ENST00000373887 C8orf46Q8TAG6 207 aa11.84□□□□□ -0.51
TRAF1-201ENST00000373887 IFI27L1Q96BM0 104 aa11.84□□□□□ -0.51
TRAF1-201ENST00000373887 LOC105371267A0A1B0GV96 52 aa11.83□□□□□ -0.51
TRAF1-201ENST00000373887 RPL35AP18077 110 aaKnown RBP11.83□□□□□ -0.51
TRAF1-201ENST00000373887 SNRNP200O75643 2136 aaKnown RBP11.83□□□□□ -0.52
TRAF1-201ENST00000373887 C15orf61A6NNL5 157 aa11.83□□□□□ -0.52
TRAF1-201ENST00000373887 VWC2LB2RUY7 222 aa11.83□□□□□ -0.52
TRAF1-201ENST00000373887 LAGE3Q14657 143 aa11.83□□□□□ -0.52
TRAF1-201ENST00000373887 PVRIGQ6DKI7 326 aa11.83□□□□□ -0.52
TRAF1-201ENST00000373887 OCC1Q8TAD7 63 aa11.83□□□□□ -0.52
TRAF1-201ENST00000373887 A0A087WX48 190 aa11.83□□□□□ -0.52
TRAF1-201ENST00000373887 IGKV1D-13A0A0B4J2D9 117 aa11.83□□□□□ -0.52
TRAF1-201ENST00000373887 SAP30O75446 220 aa11.83□□□□□ -0.52
TRAF1-201ENST00000373887 IGKV1-13P0DP09 117 aa11.83□□□□□ -0.52
TRAF1-201ENST00000373887 GGNQ86UU5 652 aa11.83□□□□□ -0.52
TRAF1-201ENST00000373887 F8WEM9 126 aa11.83□□□□□ -0.52
TRAF1-201ENST00000373887 EFNA2O43921 213 aa11.83□□□□□ -0.52
TRAF1-201ENST00000373887 ZNF362Q5T0B9 420 aaPredicted RBP11.83□□□□□ -0.52
TRAF1-201ENST00000373887 RCHY1Q96PM5 261 aa11.83□□□□□ -0.52
TRAF1-201ENST00000373887 PRADC1Q9BSG0 188 aa11.83□□□□□ -0.52
TRAF1-201ENST00000373887 MSRB2Q9Y3D2 182 aa11.83□□□□□ -0.52
TRAF1-201ENST00000373887 RPL32P62910 135 aaKnown RBP11.83□□□□□ -0.52
TRAF1-201ENST00000373887 SP5Q6BEB4 398 aaPredicted RBP11.83□□□□□ -0.52
TRAF1-201ENST00000373887 TMEM144Q7Z5S9 345 aa11.83□□□□□ -0.52
TRAF1-201ENST00000373887 DOCK4Q8N1I0 1966 aa11.83□□□□□ -0.52
TRAF1-201ENST00000373887 RPL15P61313 204 aaKnown RBP11.82□□□□□ -0.52
TRAF1-201ENST00000373887 NRN1LQ496H8 165 aa11.82□□□□□ -0.52
TRAF1-201ENST00000373887 TMEM133Q9H2Q1 129 aa11.82□□□□□ -0.52
TRAF1-201ENST00000373887 NDUFAF3Q9BU61 184 aa11.82□□□□□ -0.52
TRAF1-201ENST00000373887 TIMM23O14925 209 aa11.82□□□□□ -0.52
TRAF1-201ENST00000373887 OR9G9P0C7N8 305 aa11.82□□□□□ -0.52
TRAF1-201ENST00000373887 MST1P26927 711 aa11.82□□□□□ -0.52
TRAF1-201ENST00000373887 HSD52Q0P140 79 aa11.82□□□□□ -0.52
TRAF1-201ENST00000373887 OR10W1Q8NGF6 305 aa11.82□□□□□ -0.52
TRAF1-201ENST00000373887 SCRT1Q9BWW7 348 aa11.82□□□□□ -0.52
TRAF1-201ENST00000373887 VSIRQ9H7M9 311 aa11.82□□□□□ -0.52
TRAF1-201ENST00000373887 ITGB1BP1O14713 200 aa11.82□□□□□ -0.52
TRAF1-201ENST00000373887 LINC00271P0C7V0 271 aa11.82□□□□□ -0.52
TRAF1-201ENST00000373887 KLHDC3Q9BQ90 382 aa11.81□□□□□ -0.52
TRAF1-201ENST00000373887 PAX8Q06710 450 aa11.81□□□□□ -0.52
TRAF1-201ENST00000373887 FAM186AA6NE01 2351 aa11.81□□□□□ -0.52
TRAF1-201ENST00000373887 TRAV8-3A0A0A6YYJ7 113 aa11.81□□□□□ -0.52
TRAF1-201ENST00000373887 TIMP3P35625 211 aa11.81□□□□□ -0.52
TRAF1-201ENST00000373887 COX11Q9Y6N1 276 aa11.81□□□□□ -0.52
TRAF1-201ENST00000373887 A0A1W2PRE2 83 aa11.81□□□□□ -0.52
TRAF1-201ENST00000373887 A8MXK9 166 aa11.81□□□□□ -0.52
TRAF1-201ENST00000373887 C2orf82Q6UX34 121 aa11.81□□□□□ -0.52
TRAF1-201ENST00000373887 TMEM238C9JI98 176 aa11.81□□□□□ -0.52
TRAF1-201ENST00000373887 ZNF876PQ49A33 203 aa11.81□□□□□ -0.52
TRAF1-201ENST00000373887 D6R8Y8 96 aa11.8□□□□□ -0.52
TRAF1-201ENST00000373887 SRSF7Q16629 238 aaKnown RBP eCLIP11.8□□□□□ -0.52
TRAF1-201ENST00000373887 A0A1B0GTI1 187 aa11.8□□□□□ -0.52
TRAF1-201ENST00000373887 CHCHD1Q96BP2 118 aaKnown RBP11.8□□□□□ -0.52
TRAF1-201ENST00000373887 ZNF319Q9P2F9 582 aa11.8□□□□□ -0.52
TRAF1-201ENST00000373887 TRGV1A0A0A0MS02 117 aa11.8□□□□□ -0.52
TRAF1-201ENST00000373887 TCRAP04437 139 aa11.8□□□□□ -0.52
TRAF1-201ENST00000373887 SSBP2P81877 361 aaPredicted RBP11.8□□□□□ -0.52
TRAF1-201ENST00000373887 MORN2Q502X0 79 aa11.8□□□□□ -0.52
TRAF1-201ENST00000373887 GAGE2AQ6NT46 116 aa11.8□□□□□ -0.52
TRAF1-201ENST00000373887 LCNL1Q6ZST4 164 aa11.8□□□□□ -0.52
TRAF1-201ENST00000373887 SDK2Q58EX2 2172 aa11.8□□□□□ -0.52
TRAF1-201ENST00000373887 EFNA4P52798 201 aa11.8□□□□□ -0.52
TRAF1-201ENST00000373887 EFNB3Q15768 340 aa11.8□□□□□ -0.52
TRAF1-201ENST00000373887 LAIR2Q6ISS4 152 aa11.8□□□□□ -0.52
TRAF1-201ENST00000373887 HIST1H2BKO60814 126 aa11.79□□□□□ -0.52
TRAF1-201ENST00000373887 HIST1H2BJP06899 126 aa11.79□□□□□ -0.52
TRAF1-201ENST00000373887 HIST1H2BOP23527 126 aa11.79□□□□□ -0.52
TRAF1-201ENST00000373887 HIST1H2BBP33778 126 aa11.79□□□□□ -0.52
TRAF1-201ENST00000373887 HIST1H2BDP58876 126 aa11.79□□□□□ -0.52
TRAF1-201ENST00000373887 HIST1H2BCP62807 126 aa11.79□□□□□ -0.52
TRAF1-201ENST00000373887 HIST2H2BEQ16778 126 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms