RNA–Protein interactions for RNA: ENST00000373720.3

SNRNP40-202, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 1 (best) BASIC

Gene SNRNP40, Length 1,087 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-202ENST00000373720 TRGC1P0CF51 173 aa6.92□□□□□ -1.3
SNRNP40-202ENST00000373720 MYOD1P15172 320 aa6.92□□□□□ -1.3
SNRNP40-202ENST00000373720 TMEM11P17152 192 aa6.92□□□□□ -1.3
SNRNP40-202ENST00000373720 HOXB4P17483 251 aaPredicted RBP6.92□□□□□ -1.3
SNRNP40-202ENST00000373720 GNLYP22749 145 aa6.92□□□□□ -1.3
SNRNP40-202ENST00000373720 CRYBB3P26998 211 aa6.92□□□□□ -1.3
SNRNP40-202ENST00000373720 CRIP2P52943 208 aaPredicted RBP6.92□□□□□ -1.3
SNRNP40-202ENST00000373720 PAFAH1B2P68402 229 aa6.92□□□□□ -1.3
SNRNP40-202ENST00000373720 CX3CL1P78423 397 aa6.92□□□□□ -1.3
SNRNP40-202ENST00000373720 PSG9Q00887 426 aa6.92□□□□□ -1.3
SNRNP40-202ENST00000373720 ZNF90Q03938 601 aa6.92□□□□□ -1.3
SNRNP40-202ENST00000373720 PAX8Q06710 450 aa6.92□□□□□ -1.3
SNRNP40-202ENST00000373720 HES1Q14469 280 aa6.92□□□□□ -1.3
SNRNP40-202ENST00000373720 CDSNQ15517 529 aa6.92□□□□□ -1.3
SNRNP40-202ENST00000373720 CENPWQ5EE01 88 aa6.92□□□□□ -1.3
SNRNP40-202ENST00000373720 IBA57Q5T440 356 aaKnown RBP6.92□□□□□ -1.3
SNRNP40-202ENST00000373720 CLEC2AQ6UVW9 174 aa6.92□□□□□ -1.3
SNRNP40-202ENST00000373720 PATE2Q6UY27 113 aa6.92□□□□□ -1.3
SNRNP40-202ENST00000373720 ZFP82Q8N141 532 aa6.92□□□□□ -1.3
SNRNP40-202ENST00000373720 OR4B1Q8NGF8 309 aa6.92□□□□□ -1.3
SNRNP40-202ENST00000373720 WIPF2Q8TF74 440 aaPredicted RBP6.92□□□□□ -1.3
SNRNP40-202ENST00000373720 TMEM18Q96B42 140 aa6.92□□□□□ -1.3
SNRNP40-202ENST00000373720 SHANK2-AS3Q9BTD1 123 aa6.92□□□□□ -1.3
SNRNP40-202ENST00000373720 KRTAP9-2Q9BYQ4 174 aa6.92□□□□□ -1.3
SNRNP40-202ENST00000373720 MEGF9Q9H1U4 602 aa6.92□□□□□ -1.3
SNRNP40-202ENST00000373720 ZNF492Q9P255 531 aa6.92□□□□□ -1.3
SNRNP40-202ENST00000373720 TRAPPC1Q9Y5R8 145 aa6.92□□□□□ -1.3
SNRNP40-202ENST00000373720 PIEZO2Q9H5I5 2752 aa6.92□□□□□ -1.3
SNRNP40-202ENST00000373720 TRBV20OR9-2A0A075B6H5 130 aa6.91□□□□□ -1.3
SNRNP40-202ENST00000373720 TRBV7-1A0A0A6YYK4 115 aa6.91□□□□□ -1.3
SNRNP40-202ENST00000373720 IGHV3-72A0A0B4J1Y9 119 aa6.91□□□□□ -1.3
SNRNP40-202ENST00000373720 A0A0U1RQK1 487 aa6.91□□□□□ -1.3
SNRNP40-202ENST00000373720 A0A1B0GW15 77 aa6.91□□□□□ -1.3
SNRNP40-202ENST00000373720 WI2-2373I1.2A0A1W2PRP0 233 aa6.91□□□□□ -1.3
SNRNP40-202ENST00000373720 ZNF320A2RRD8 509 aa6.91□□□□□ -1.3
SNRNP40-202ENST00000373720 GGTLC3B5MD39 225 aa6.91□□□□□ -1.3
SNRNP40-202ENST00000373720 K7EIM0 57 aa6.91□□□□□ -1.3
SNRNP40-202ENST00000373720 GNG7O60262 68 aa6.91□□□□□ -1.3
SNRNP40-202ENST00000373720 EIF3GO75821 320 aaKnown RBP eCLIP6.91□□□□□ -1.3
SNRNP40-202ENST00000373720 HLA-DQA1P01909 254 aa6.91□□□□□ -1.3
SNRNP40-202ENST00000373720 PSG1P11464 419 aa6.91□□□□□ -1.3
SNRNP40-202ENST00000373720 SLC25A16P16260 332 aa6.91□□□□□ -1.3
SNRNP40-202ENST00000373720 RPL7P18124 248 aaKnown RBP6.91□□□□□ -1.3
SNRNP40-202ENST00000373720 ORM2P19652 201 aa6.91□□□□□ -1.3
SNRNP40-202ENST00000373720 NDUFA6P56556 154 aa6.91□□□□□ -1.3
SNRNP40-202ENST00000373720 C10orf55Q5SWW7 151 aa6.91□□□□□ -1.3
SNRNP40-202ENST00000373720 SPATA31B1PQ5VZV4 182 aa6.91□□□□□ -1.3
SNRNP40-202ENST00000373720 Q6AWC8 147 aa6.91□□□□□ -1.3
SNRNP40-202ENST00000373720 ZNF329Q86UD4 541 aa6.91□□□□□ -1.3
SNRNP40-202ENST00000373720 BAGE2Q86Y30 109 aa6.91□□□□□ -1.3
SNRNP40-202ENST00000373720 OR1B1Q8NGR6 318 aa6.91□□□□□ -1.3
SNRNP40-202ENST00000373720 FAM110DQ8TAY7 271 aaPredicted RBP6.91□□□□□ -1.3
SNRNP40-202ENST00000373720 CMTM2Q8TAZ6 248 aa6.91□□□□□ -1.3
SNRNP40-202ENST00000373720 FAM168AQ92567 244 aa6.91□□□□□ -1.3
SNRNP40-202ENST00000373720 RITA1Q96K30 269 aa6.91□□□□□ -1.3
SNRNP40-202ENST00000373720 IGF2BP2-AS1Q96M15 143 aa6.91□□□□□ -1.3
SNRNP40-202ENST00000373720 SLC25A39Q9BZJ4 359 aaPredicted RBP6.91□□□□□ -1.3
SNRNP40-202ENST00000373720 C21orf62Q9NYP8 219 aa6.91□□□□□ -1.3
SNRNP40-202ENST00000373720 DSPP15924 2871 aaKnown RBP6.91□□□□□ -1.3
SNRNP40-202ENST00000373720 MALRD1Q5VYJ5 2156 aa6.91□□□□□ -1.3
SNRNP40-202ENST00000373720 A0A1W2PRD5 423 aa6.9□□□□□ -1.3
SNRNP40-202ENST00000373720 A0A1W2PRF3 423 aa6.9□□□□□ -1.3
SNRNP40-202ENST00000373720 A0A1W2PRM7 423 aa6.9□□□□□ -1.3
SNRNP40-202ENST00000373720 SMIM27A0A1W2PRY6 76 aa6.9□□□□□ -1.3
SNRNP40-202ENST00000373720 NCBP2LA6PVI3 153 aaKnown RBP6.9□□□□□ -1.3
SNRNP40-202ENST00000373720 A8MWL6 223 aa6.9□□□□□ -1.3
SNRNP40-202ENST00000373720 VWC2LB2RUY7 222 aa6.9□□□□□ -1.3
SNRNP40-202ENST00000373720 BMPR1BO00238 502 aa6.9□□□□□ -1.3
SNRNP40-202ENST00000373720 NPFFO15130 113 aa6.9□□□□□ -1.3
SNRNP40-202ENST00000373720 ESDP10768 282 aa6.9□□□□□ -1.3
SNRNP40-202ENST00000373720 GP9P14770 177 aa6.9□□□□□ -1.3
SNRNP40-202ENST00000373720 MFAP2P55001 183 aa6.9□□□□□ -1.3
SNRNP40-202ENST00000373720 RANP62826 216 aaKnown RBP6.9□□□□□ -1.3
SNRNP40-202ENST00000373720 SSBP2P81877 361 aaPredicted RBP6.9□□□□□ -1.3
SNRNP40-202ENST00000373720 Q0VG73 95 aa6.9□□□□□ -1.3
SNRNP40-202ENST00000373720 MLANAQ16655 118 aa6.9□□□□□ -1.3
SNRNP40-202ENST00000373720 OR10J3Q5JRS4 329 aa6.9□□□□□ -1.3
SNRNP40-202ENST00000373720 C1orf194Q5T5A4 169 aa6.9□□□□□ -1.3
SNRNP40-202ENST00000373720 HIST3H2BBQ8N257 126 aa6.9□□□□□ -1.3
SNRNP40-202ENST00000373720 TEX29Q8N6K0 151 aa6.9□□□□□ -1.3
SNRNP40-202ENST00000373720 TMEM75Q8N9X5 138 aa6.9□□□□□ -1.3
SNRNP40-202ENST00000373720 NECAP1Q8NC96 275 aa6.9□□□□□ -1.3
SNRNP40-202ENST00000373720 FRZBQ92765 325 aa6.9□□□□□ -1.3
SNRNP40-202ENST00000373720 RNF125Q96EQ8 232 aa6.9□□□□□ -1.3
SNRNP40-202ENST00000373720 GRAMD2BQ96HH9 432 aa6.9□□□□□ -1.3
SNRNP40-202ENST00000373720 CCL19Q99731 98 aa6.9□□□□□ -1.3
SNRNP40-202ENST00000373720 ELOVL1Q9BW60 279 aa6.9□□□□□ -1.3
SNRNP40-202ENST00000373720 AAMDCQ9H7C9 122 aa6.9□□□□□ -1.3
SNRNP40-202ENST00000373720 TPSG1Q9NRR2 321 aa6.9□□□□□ -1.3
SNRNP40-202ENST00000373720 NAT8BQ9UHF3 227 aa6.9□□□□□ -1.3
SNRNP40-202ENST00000373720 HILPDAQ9Y5L2 63 aa6.9□□□□□ -1.3
SNRNP40-202ENST00000373720 V9GYV3 84 aa6.9□□□□□ -1.3
SNRNP40-202ENST00000373720 PCNX1Q96RV3 2341 aa6.9□□□□□ -1.31
SNRNP40-202ENST00000373720 DIDO1Q9BTC0 2240 aaKnown RBP6.89□□□□□ -1.31
SNRNP40-202ENST00000373720 TRAV20A0A0B4J274 112 aa6.89□□□□□ -1.31
SNRNP40-202ENST00000373720 KRTAP9-6A0A140TA67 174 aa6.89□□□□□ -1.31
SNRNP40-202ENST00000373720 IZUMO1RA6ND01 250 aa6.89□□□□□ -1.31
SNRNP40-202ENST00000373720 FAM223BA6NKX1 122 aa6.89□□□□□ -1.31
SNRNP40-202ENST00000373720 H3BRN7 92 aa6.89□□□□□ -1.31
SNRNP40-202ENST00000373720 J3QLI3 93 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms