RNA–Protein interactions for RNA: ENST00000373482.6

PBX3-202, Transcript of PBX homeobox 3, humanhuman

TSL 1 (best)

Gene PBX3, Length 1,130 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX3-202ENST00000373482 GP9P14770 177 aa13.86□□□□□ -0.19
PBX3-202ENST00000373482 ARL16Q0P5N6 197 aa13.86□□□□□ -0.19
PBX3-202ENST00000373482 CD300EQ496F6 205 aaPredicted RBP13.86□□□□□ -0.19
PBX3-202ENST00000373482 TEPPQ6URK8 271 aa13.86□□□□□ -0.19
PBX3-202ENST00000373482 TMEM217Q8N7C4 229 aa13.86□□□□□ -0.19
PBX3-202ENST00000373482 THAP6Q8TBB0 222 aa13.86□□□□□ -0.19
PBX3-202ENST00000373482 FBN3Q75N90 2809 aa13.85□□□□□ -0.19
PBX3-202ENST00000373482 IGKV1OR2-108A0A075B7D4 117 aa13.85□□□□□ -0.19
PBX3-202ENST00000373482 A0A1W2PS18 150 aa13.85□□□□□ -0.19
PBX3-202ENST00000373482 CFDP00746 253 aaPredicted RBP13.85□□□□□ -0.19
PBX3-202ENST00000373482 GIPP09681 153 aaPredicted RBP13.85□□□□□ -0.19
PBX3-202ENST00000373482 ZNF90Q03938 601 aa13.85□□□□□ -0.19
PBX3-202ENST00000373482 FGL1Q08830 312 aa13.85□□□□□ -0.19
PBX3-202ENST00000373482 LAMTOR1Q6IAA8 161 aa13.85□□□□□ -0.19
PBX3-202ENST00000373482 RBPMS2Q6ZRY4 209 aaKnown RBP13.85□□□□□ -0.19
PBX3-202ENST00000373482 PRR25Q96S07 402 aa13.85□□□□□ -0.19
PBX3-202ENST00000373482 RHPN1-AS1Q9BWJ2 59 aa13.85□□□□□ -0.19
PBX3-202ENST00000373482 TMEM231Q9H6L2 316 aa13.85□□□□□ -0.19
PBX3-202ENST00000373482 IGHV3-49A0A0A0MS15 119 aa13.84□□□□□ -0.19
PBX3-202ENST00000373482 TRAV25A0A0B4J276 109 aa13.84□□□□□ -0.19
PBX3-202ENST00000373482 CHEK1O14757 476 aa13.84□□□□□ -0.19
PBX3-202ENST00000373482 BAXQ07812 192 aa13.84□□□□□ -0.19
PBX3-202ENST00000373482 ATP6V1FQ16864 119 aa13.84□□□□□ -0.19
PBX3-202ENST00000373482 BPIFCQ8NFQ6 507 aa13.84□□□□□ -0.19
PBX3-202ENST00000373482 RNF125Q96EQ8 232 aa13.84□□□□□ -0.19
PBX3-202ENST00000373482 RNF126Q9BV68 326 aa13.84□□□□□ -0.19
PBX3-202ENST00000373482 UQCC1Q9NVA1 299 aa13.84□□□□□ -0.19
PBX3-202ENST00000373482 MBD2Q9UBB5 411 aa13.84□□□□□ -0.19
PBX3-202ENST00000373482 RABAC1Q9UI14 185 aa13.84□□□□□ -0.19
PBX3-202ENST00000373482 WI2-2373I1.2A0A1W2PRP0 233 aa13.83□□□□□ -0.2
PBX3-202ENST00000373482 IZUMO1RA6ND01 250 aa13.83□□□□□ -0.2
PBX3-202ENST00000373482 CD5P06127 495 aa13.83□□□□□ -0.2
PBX3-202ENST00000373482 HNRNPCP07910 306 aaKnown RBP eCLIP13.83□□□□□ -0.2
PBX3-202ENST00000373482 CRYBB3P26998 211 aa13.83□□□□□ -0.2
PBX3-202ENST00000373482 RAP2BP61225 183 aa13.83□□□□□ -0.2
PBX3-202ENST00000373482 LYZP61626 148 aa13.83□□□□□ -0.2
PBX3-202ENST00000373482 EWSR1Q01844 656 aaKnown RBP eCLIP13.83□□□□□ -0.2
PBX3-202ENST00000373482 NHLH2Q02577 135 aa13.83□□□□□ -0.2
PBX3-202ENST00000373482 OR2F1Q13607 317 aa13.83□□□□□ -0.2
PBX3-202ENST00000373482 CYP2G1PQ6ZSU1 146 aa13.83□□□□□ -0.2
PBX3-202ENST00000373482 TMEM61Q8N0U2 210 aa13.83□□□□□ -0.2
PBX3-202ENST00000373482 GRAMD2BQ96HH9 432 aa13.83□□□□□ -0.2
PBX3-202ENST00000373482 PBDC1Q9BVG4 233 aa13.83□□□□□ -0.2
PBX3-202ENST00000373482 TMEM147Q9BVK8 224 aa13.83□□□□□ -0.2
PBX3-202ENST00000373482 PFDN2Q9UHV9 154 aa13.83□□□□□ -0.2
PBX3-202ENST00000373482 SELENOKQ9Y6D0 94 aa13.83□□□□□ -0.2
PBX3-202ENST00000373482 IGHV3OR16-13A0A075B7E8 117 aa13.82□□□□□ -0.2
PBX3-202ENST00000373482 IGHV3-74A0A0B4J1X5 117 aa13.82□□□□□ -0.2
PBX3-202ENST00000373482 SELENOTP62341 195 aa13.82□□□□□ -0.2
PBX3-202ENST00000373482 USF2Q15853 346 aaPredicted RBP13.82□□□□□ -0.2
PBX3-202ENST00000373482 GUCA2BQ16661 112 aa13.82□□□□□ -0.2
PBX3-202ENST00000373482 LYL1P12980 280 aa13.81□□□□□ -0.2
PBX3-202ENST00000373482 NUP62P37198 522 aaPredicted RBP13.81□□□□□ -0.2
PBX3-202ENST00000373482 RAB31Q13636 194 aa13.81□□□□□ -0.2
PBX3-202ENST00000373482 GTSCR1Q86UQ5 136 aa13.81□□□□□ -0.2
PBX3-202ENST00000373482 OR5C1Q8NGR4 320 aa13.81□□□□□ -0.2
PBX3-202ENST00000373482 MRAPQ8TCY5 172 aa13.81□□□□□ -0.2
PBX3-202ENST00000373482 ST8SIA2Q92186 375 aa13.81□□□□□ -0.2
PBX3-202ENST00000373482 RNF2Q99496 336 aa13.81□□□□□ -0.2
PBX3-202ENST00000373482 VSIRQ9H7M9 311 aa13.81□□□□□ -0.2
PBX3-202ENST00000373482 UBE2L5PA0A1B0GUS4 154 aa13.8□□□□□ -0.2
PBX3-202ENST00000373482 APOHP02749 345 aaPredicted RBP13.8□□□□□ -0.2
PBX3-202ENST00000373482 RPL12P30050 165 aaKnown RBP13.8□□□□□ -0.2
PBX3-202ENST00000373482 S100A7P31151 101 aa13.8□□□□□ -0.2
PBX3-202ENST00000373482 EIF2B2P49770 351 aaKnown RBP13.8□□□□□ -0.2
PBX3-202ENST00000373482 VWC2Q2TAL6 325 aa13.8□□□□□ -0.2
PBX3-202ENST00000373482 HSPB11Q9Y547 144 aa13.8□□□□□ -0.2
PBX3-202ENST00000373482 IGHV3-66A0A0C4DH42 116 aa13.79□□□□□ -0.2
PBX3-202ENST00000373482 ZNF785A8K8V0 405 aa13.79□□□□□ -0.2
PBX3-202ENST00000373482 TSPAN4O14817 238 aa13.79□□□□□ -0.2
PBX3-202ENST00000373482 AGPAT2O15120 278 aa13.79□□□□□ -0.2
PBX3-202ENST00000373482 GATA2P23769 480 aaPredicted RBP13.79□□□□□ -0.2
PBX3-202ENST00000373482 TCF24Q7RTU0 167 aa13.79□□□□□ -0.2
PBX3-202ENST00000373482 ZNF546Q86UE3 836 aa13.79□□□□□ -0.2
PBX3-202ENST00000373482 PPP1R14BQ96C90 147 aa13.79□□□□□ -0.2
PBX3-202ENST00000373482 SPAG8Q99932 426 aaPredicted RBP13.79□□□□□ -0.2
PBX3-202ENST00000373482 WDR83OSQ9Y284 106 aa13.79□□□□□ -0.2
PBX3-202ENST00000373482 LSM4Q9Y4Z0 139 aaKnown RBP13.79□□□□□ -0.2
PBX3-202ENST00000373482 K7EIL1 84 aa13.78□□□□□ -0.2
PBX3-202ENST00000373482 MPDU1O75352 247 aa13.78□□□□□ -0.2
PBX3-202ENST00000373482 RPL11P62913 178 aaKnown RBP13.78□□□□□ -0.2
PBX3-202ENST00000373482 PAFAH1B2P68402 229 aa13.78□□□□□ -0.2
PBX3-202ENST00000373482 DEFB121Q5J5C9 76 aa13.78□□□□□ -0.2
PBX3-202ENST00000373482 OR2T35Q8NGX2 323 aa13.78□□□□□ -0.2
PBX3-202ENST00000373482 U3KQE9 123 aa13.78□□□□□ -0.2
PBX3-202ENST00000373482 DFFBO76075 338 aa13.77□□□□□ -0.21
PBX3-202ENST00000373482 LINC00869P0C866 280 aa13.77□□□□□ -0.21
PBX3-202ENST00000373482 ORM2P19652 201 aa13.77□□□□□ -0.21
PBX3-202ENST00000373482 FGF7P21781 194 aa13.77□□□□□ -0.21
PBX3-202ENST00000373482 CAMLGP49069 296 aa13.77□□□□□ -0.21
PBX3-202ENST00000373482 CD81P60033 236 aa13.77□□□□□ -0.21
PBX3-202ENST00000373482 CLINT1Q14677 625 aa13.77□□□□□ -0.21
PBX3-202ENST00000373482 TMEM182Q6ZP80 229 aaPredicted RBP13.77□□□□□ -0.21
PBX3-202ENST00000373482 S100A7AQ86SG5 101 aa13.77□□□□□ -0.21
PBX3-202ENST00000373482 OR1B1Q8NGR6 318 aa13.77□□□□□ -0.21
PBX3-202ENST00000373482 DNAH3Q8TD57 4116 aa13.77□□□□□ -0.21
PBX3-202ENST00000373482 MGST2Q99735 147 aa13.77□□□□□ -0.21
PBX3-202ENST00000373482 SLC45A2Q9UMX9 530 aa13.77□□□□□ -0.21
PBX3-202ENST00000373482 IGKV3-7A0A075B6H7 116 aa13.76□□□□□ -0.21
PBX3-202ENST00000373482 HELTA6NFD8 242 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms