RNA–Protein interactions for RNA: ENST00000373382.5

VPS26A-202, Transcript of VPS26, retromer complex component A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene VPS26A, Length 3,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-202ENST00000373382 COTL1Q14019 142 aa14.34□□□□□ -0.11
VPS26A-202ENST00000373382 RUSC1-AS1Q66K80 236 aa14.34□□□□□ -0.11
VPS26A-202ENST00000373382 AMMECR1LQ6DCA0 310 aa14.34□□□□□ -0.11
VPS26A-202ENST00000373382 FXYD5Q96DB9 178 aa14.34□□□□□ -0.11
VPS26A-202ENST00000373382 SYS1-DBNDD2H3BUS1 97 aa14.34□□□□□ -0.11
VPS26A-202ENST00000373382 FAM87AP0C7U9 286 aa14.34□□□□□ -0.11
VPS26A-202ENST00000373382 SLC25A34Q6PIV7 304 aa14.34□□□□□ -0.11
VPS26A-202ENST00000373382 RPRMLQ8N4K4 120 aa14.34□□□□□ -0.11
VPS26A-202ENST00000373382 SARAFQ96BY9 339 aa14.34□□□□□ -0.11
VPS26A-202ENST00000373382 TPSG1Q9NRR2 321 aa14.34□□□□□ -0.11
VPS26A-202ENST00000373382 RPUSD1Q9UJJ7 312 aaKnown RBP14.34□□□□□ -0.11
VPS26A-202ENST00000373382 hADV38S2A0JD32 116 aa14.34□□□□□ -0.11
VPS26A-202ENST00000373382 IGLV1-44P01699 117 aa14.34□□□□□ -0.11
VPS26A-202ENST00000373382 NBEAP1P0C6P0 100 aa14.34□□□□□ -0.11
VPS26A-202ENST00000373382 GAFA1Q96PS6 74 aa14.34□□□□□ -0.11
VPS26A-202ENST00000373382 TACC2O95359 2948 aa14.33□□□□□ -0.11
VPS26A-202ENST00000373382 PRR33A8MZF0 331 aa14.33□□□□□ -0.12
VPS26A-202ENST00000373382 WT1P19544 449 aaPredicted RBP14.33□□□□□ -0.12
VPS26A-202ENST00000373382 CR1LQ2VPA4 569 aa14.33□□□□□ -0.12
VPS26A-202ENST00000373382 GAL3ST2Q9H3Q3 398 aa14.33□□□□□ -0.12
VPS26A-202ENST00000373382 RPP21Q9H633 154 aaKnown RBP14.33□□□□□ -0.12
VPS26A-202ENST00000373382 FNDC10F2Z333 226 aa14.33□□□□□ -0.12
VPS26A-202ENST00000373382 COL8A1P27658 744 aa14.33□□□□□ -0.12
VPS26A-202ENST00000373382 Q71RC1 249 aaPredicted RBP14.33□□□□□ -0.12
VPS26A-202ENST00000373382 GTSF1Q8WW33 167 aa14.33□□□□□ -0.12
VPS26A-202ENST00000373382 SLC25A15Q9Y619 301 aa14.33□□□□□ -0.12
VPS26A-202ENST00000373382 A8MWL6 223 aa14.32□□□□□ -0.12
VPS26A-202ENST00000373382 DLX1P56177 255 aa14.32□□□□□ -0.12
VPS26A-202ENST00000373382 SLC25A48Q6ZT89 311 aaKnown RBP14.32□□□□□ -0.12
VPS26A-202ENST00000373382 CIARTQ8N365 385 aaPredicted RBP14.32□□□□□ -0.12
VPS26A-202ENST00000373382 PNKDQ8N490 385 aa14.32□□□□□ -0.12
VPS26A-202ENST00000373382 GPR82Q96P67 336 aa14.32□□□□□ -0.12
VPS26A-202ENST00000373382 CHRDL1Q9BU40 450 aa14.32□□□□□ -0.12
VPS26A-202ENST00000373382 NDUFA4L2Q9NRX3 87 aa14.32□□□□□ -0.12
VPS26A-202ENST00000373382 IGHV2-70DA0A0C4DH43 119 aa14.32□□□□□ -0.12
VPS26A-202ENST00000373382 TCRBV4S1A1TA0A5B7 111 aa14.32□□□□□ -0.12
VPS26A-202ENST00000373382 UQCRFS1P47985 274 aa14.32□□□□□ -0.12
VPS26A-202ENST00000373382 PRNTQ86SH4 94 aa14.32□□□□□ -0.12
VPS26A-202ENST00000373382 WIPF2Q8TF74 440 aaPredicted RBP14.32□□□□□ -0.12
VPS26A-202ENST00000373382 PIEZO2Q9H5I5 2752 aa14.32□□□□□ -0.12
VPS26A-202ENST00000373382 PSMB11A5LHX3 300 aa14.32□□□□□ -0.12
VPS26A-202ENST00000373382 TOMM40O96008 361 aa14.32□□□□□ -0.12
VPS26A-202ENST00000373382 HTR1DP28221 377 aa14.32□□□□□ -0.12
VPS26A-202ENST00000373382 ANKRD39Q53RE8 183 aa14.32□□□□□ -0.12
VPS26A-202ENST00000373382 CACNG8Q8WXS5 425 aa14.32□□□□□ -0.12
VPS26A-202ENST00000373382 TMEM191AQ9H0A3 160 aa14.32□□□□□ -0.12
VPS26A-202ENST00000373382 WNK2Q9Y3S1 2297 aa14.31□□□□□ -0.12
VPS26A-202ENST00000373382 POU2AF1Q16633 256 aa14.31□□□□□ -0.12
VPS26A-202ENST00000373382 FAM231DQ6ZW35 169 aa14.31□□□□□ -0.12
VPS26A-202ENST00000373382 A0A1W2PRD5 423 aa14.31□□□□□ -0.12
VPS26A-202ENST00000373382 A0A1W2PRF3 423 aa14.31□□□□□ -0.12
VPS26A-202ENST00000373382 A0A1W2PRM7 423 aa14.31□□□□□ -0.12
VPS26A-202ENST00000373382 KLF5Q13887 457 aaPredicted RBP14.31□□□□□ -0.12
VPS26A-202ENST00000373382 C1orf162Q8NEQ5 155 aaPredicted RBP14.31□□□□□ -0.12
VPS26A-202ENST00000373382 NAA38Q9BRA0 125 aaKnown RBP14.31□□□□□ -0.12
VPS26A-202ENST00000373382 LHBP01229 141 aa14.3□□□□□ -0.12
VPS26A-202ENST00000373382 SUB1P53999 127 aaKnown RBP eCLIP14.3□□□□□ -0.128e-6■■■□□ 15.3
VPS26A-202ENST00000373382 ZNF714Q96N38 554 aa14.3□□□□□ -0.12
VPS26A-202ENST00000373382 MAP1LC3CQ9BXW4 147 aa14.3□□□□□ -0.12
VPS26A-202ENST00000373382 PLSCR4Q9NRQ2 329 aa14.3□□□□□ -0.12
VPS26A-202ENST00000373382 IGHV1-46P01743 117 aa14.3□□□□□ -0.12
VPS26A-202ENST00000373382 RASL11AQ6T310 242 aa14.3□□□□□ -0.12
VPS26A-202ENST00000373382 TMUB1Q9BVT8 246 aa14.3□□□□□ -0.12
VPS26A-202ENST00000373382 TNRC18O15417 2968 aaPredicted RBP14.3□□□□□ -0.12
VPS26A-202ENST00000373382 ATMQ13315 3056 aa14.3□□□□□ -0.12
VPS26A-202ENST00000373382 CD59P13987 128 aa14.3□□□□□ -0.12
VPS26A-202ENST00000373382 LYZP61626 148 aa14.3□□□□□ -0.12
VPS26A-202ENST00000373382 RITA1Q96K30 269 aa14.3□□□□□ -0.12
VPS26A-202ENST00000373382 IGKV1D-37A0A075B6S9 117 aa14.29□□□□□ -0.12
VPS26A-202ENST00000373382 FXYD7P58549 80 aa14.29□□□□□ -0.12
VPS26A-202ENST00000373382 EXOC3-AS1Q8N2X6 119 aa14.29□□□□□ -0.12
VPS26A-202ENST00000373382 OSR1Q8TAX0 266 aaPredicted RBP14.29□□□□□ -0.12
VPS26A-202ENST00000373382 PERPQ96FX8 193 aa14.29□□□□□ -0.12
VPS26A-202ENST00000373382 TAX1BP3O14907 124 aa14.29□□□□□ -0.12
VPS26A-202ENST00000373382 OR2J3O76001 311 aa14.29□□□□□ -0.12
VPS26A-202ENST00000373382 GLRXP35754 106 aa14.29□□□□□ -0.12
VPS26A-202ENST00000373382 SAPCD1Q5SSQ6 148 aa14.29□□□□□ -0.12
VPS26A-202ENST00000373382 GOLT1AQ6ZVE7 132 aa14.29□□□□□ -0.12
VPS26A-202ENST00000373382 CCL17Q92583 94 aa14.29□□□□□ -0.12
VPS26A-202ENST00000373382 DMXL1Q9Y485 3027 aa14.29□□□□□ -0.12
VPS26A-202ENST00000373382 LOC389332A0A1B0GUA5 103 aa14.28□□□□□ -0.12
VPS26A-202ENST00000373382 BVES-AS1Q5T3Y7 98 aa14.28□□□□□ -0.12
VPS26A-202ENST00000373382 TEX45Q8NA69 505 aa14.28□□□□□ -0.12
VPS26A-202ENST00000373382 Q9H3A6 140 aa14.28□□□□□ -0.12
VPS26A-202ENST00000373382 CFHR2P36980 270 aa14.28□□□□□ -0.12
VPS26A-202ENST00000373382 FAM27E3Q08E93 113 aa14.28□□□□□ -0.12
VPS26A-202ENST00000373382 GUSBP1Q15486 140 aa14.28□□□□□ -0.12
VPS26A-202ENST00000373382 TMEM116Q8NCL8 245 aa14.28□□□□□ -0.12
VPS26A-202ENST00000373382 BDP1A6H8Y1 2624 aa14.28□□□□□ -0.12
VPS26A-202ENST00000373382 C22orf46C9J442 243 aa14.28□□□□□ -0.12
VPS26A-202ENST00000373382 FAM120AOSQ5T036 256 aa14.28□□□□□ -0.12
VPS26A-202ENST00000373382 ZNF474Q6S9Z5 364 aaPredicted RBP14.28□□□□□ -0.12
VPS26A-202ENST00000373382 C22orf34Q6ZV56 151 aa14.28□□□□□ -0.12
VPS26A-202ENST00000373382 TMSB15BA0A087X1C1 80 aa14.27□□□□□ -0.12
VPS26A-202ENST00000373382 PPIAL4DF5H284 164 aa14.27□□□□□ -0.12
VPS26A-202ENST00000373382 ITGB1BP1O14713 200 aa14.27□□□□□ -0.12
VPS26A-202ENST00000373382 IGHG3P01860 377 aa14.27□□□□□ -0.12
VPS26A-202ENST00000373382 LRRC10Q5BKY1 277 aa14.27□□□□□ -0.12
VPS26A-202ENST00000373382 OR4C13Q8NGP0 309 aa14.27□□□□□ -0.12
VPS26A-202ENST00000373382 ST20Q9HBF5 79 aa14.27□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 126.2 ms