RNA–Protein interactions for RNA: ENST00000372216.8

COL4A6-202, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-202ENST00000372216 IGKV1-12A0A0C4DH73 117 aa8.07□□□□□ -1.12
COL4A6-202ENST00000372216 IGKV1D-12P01611 117 aa8.07□□□□□ -1.12
COL4A6-202ENST00000372216 SUMO4Q6EEV6 95 aa8.07□□□□□ -1.12
COL4A6-202ENST00000372216 MBNL3Q9NUK0 354 aaKnown RBP8.07□□□□□ -1.12
COL4A6-202ENST00000372216 LY6G6EA0A0G2JKS1 128 aa8.07□□□□□ -1.12
COL4A6-202ENST00000372216 DUTP33316 252 aaKnown RBP8.07□□□□□ -1.12
COL4A6-202ENST00000372216 PLA2G2CQ5R387 149 aa8.07□□□□□ -1.12
COL4A6-202ENST00000372216 C1orf122Q6ZSJ8 110 aa8.07□□□□□ -1.12
COL4A6-202ENST00000372216 U3KQA8 63 aa8.07□□□□□ -1.12
COL4A6-202ENST00000372216 TANC1Q9C0D5 1861 aa8.07□□□□□ -1.12
COL4A6-202ENST00000372216 PAX4O43316 350 aa8.06□□□□□ -1.12
COL4A6-202ENST00000372216 HIST1H4AP62805 103 aaKnown RBP8.06□□□□□ -1.12
COL4A6-202ENST00000372216 TMEM249Q2WGJ8 235 aa8.06□□□□□ -1.12
COL4A6-202ENST00000372216 RNF125Q96EQ8 232 aa8.06□□□□□ -1.12
COL4A6-202ENST00000372216 ZNF48Q96MX3 618 aaPredicted RBP8.06□□□□□ -1.12
COL4A6-202ENST00000372216 GAFA1Q96PS6 74 aa8.06□□□□□ -1.12
COL4A6-202ENST00000372216 SDHCQ99643 169 aaPredicted RBP8.06□□□□□ -1.12
COL4A6-202ENST00000372216 FRMPD3Q5JV73 1810 aa8.06□□□□□ -1.12
COL4A6-202ENST00000372216 IGKV1-27A0A075B6S5 117 aa8.06□□□□□ -1.12
COL4A6-202ENST00000372216 OTORQ9NRC9 128 aa8.06□□□□□ -1.12
COL4A6-202ENST00000372216 F8WEM9 126 aa8.06□□□□□ -1.12
COL4A6-202ENST00000372216 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.06□□□□□ -1.12
COL4A6-202ENST00000372216 PET117Q6UWS5 81 aa8.06□□□□□ -1.12
COL4A6-202ENST00000372216 RPP21Q9H633 154 aaKnown RBP8.06□□□□□ -1.12
COL4A6-202ENST00000372216 IGHV1-3A0A0C4DH29 117 aa8.06□□□□□ -1.12
COL4A6-202ENST00000372216 A0A1B0GWB2 263 aa8.06□□□□□ -1.12
COL4A6-202ENST00000372216 SLC25A16P16260 332 aa8.06□□□□□ -1.12
COL4A6-202ENST00000372216 HOXD3P31249 432 aaPredicted RBP8.06□□□□□ -1.12
COL4A6-202ENST00000372216 ZNF600Q6ZNG1 722 aa8.06□□□□□ -1.12
COL4A6-202ENST00000372216 TCF23Q7RTU1 214 aa8.06□□□□□ -1.12
COL4A6-202ENST00000372216 PNRC2Q9NPJ4 139 aaKnown RBP8.06□□□□□ -1.12
COL4A6-202ENST00000372216 CD55P08174 381 aa8.06□□□□□ -1.12
COL4A6-202ENST00000372216 PRCDQ00LT1 54 aa8.05□□□□□ -1.12
COL4A6-202ENST00000372216 NR2C2APQ86WQ0 139 aa8.05□□□□□ -1.12
COL4A6-202ENST00000372216 ZNF257Q9Y2Q1 563 aa8.05□□□□□ -1.12
COL4A6-202ENST00000372216 TCF20Q9UGU0 1960 aaKnown RBP8.05□□□□□ -1.12
COL4A6-202ENST00000372216 TRAV8-2A0A0B4J237 113 aa8.05□□□□□ -1.12
COL4A6-202ENST00000372216 TRAV5A0A0B4J249 113 aa8.05□□□□□ -1.12
COL4A6-202ENST00000372216 KLF17Q5JT82 389 aaPredicted RBP8.05□□□□□ -1.12
COL4A6-202ENST00000372216 MINOS1Q5TGZ0 78 aa8.05□□□□□ -1.12
COL4A6-202ENST00000372216 PUSL1Q8N0Z8 303 aaKnown RBP8.05□□□□□ -1.12
COL4A6-202ENST00000372216 RNF182Q8N6D2 247 aa8.05□□□□□ -1.12
COL4A6-202ENST00000372216 MINOS1-NBL1R4GNA1 71 aa8.05□□□□□ -1.12
COL4A6-202ENST00000372216 M0R1W7 72 aa8.05□□□□□ -1.12
COL4A6-202ENST00000372216 DUSP14O95147 198 aaKnown RBP8.05□□□□□ -1.12
COL4A6-202ENST00000372216 CLPSL2Q6UWE3 100 aa8.05□□□□□ -1.12
COL4A6-202ENST00000372216 TMEM144Q7Z5S9 345 aa8.05□□□□□ -1.12
COL4A6-202ENST00000372216 SLC50A1Q9BRV3 221 aa8.05□□□□□ -1.12
COL4A6-202ENST00000372216 BPESC1Q9GZL8 116 aa8.05□□□□□ -1.12
COL4A6-202ENST00000372216 FBLN5Q9UBX5 448 aa8.05□□□□□ -1.12
COL4A6-202ENST00000372216 E7EQL1 145 aa8.05□□□□□ -1.12
COL4A6-202ENST00000372216 PRB1P04280 392 aa8.05□□□□□ -1.12
COL4A6-202ENST00000372216 CD300EQ496F6 205 aaPredicted RBP8.05□□□□□ -1.12
COL4A6-202ENST00000372216 LBHQ53QV2 105 aaPredicted RBP8.05□□□□□ -1.12
COL4A6-202ENST00000372216 GFI1Q99684 422 aa8.05□□□□□ -1.12
COL4A6-202ENST00000372216 RPUSD1Q9UJJ7 312 aaKnown RBP8.05□□□□□ -1.12
COL4A6-202ENST00000372216 CHTOPQ9Y3Y2 248 aaKnown RBP8.05□□□□□ -1.12
COL4A6-202ENST00000372216 SPTBP11277 2137 aa8.05□□□□□ -1.12
COL4A6-202ENST00000372216 TRGV11A0A075B6L2 103 aa8.05□□□□□ -1.12
COL4A6-202ENST00000372216 TRBV9A0A0B4J1U6 114 aa8.05□□□□□ -1.12
COL4A6-202ENST00000372216 NPIPB5A8MRT5 1133 aa8.05□□□□□ -1.12
COL4A6-202ENST00000372216 SLC25A2Q9BXI2 301 aa8.05□□□□□ -1.12
COL4A6-202ENST00000372216 DPRXA6NFQ7 191 aa8.04□□□□□ -1.12
COL4A6-202ENST00000372216 C15orf32Q32M92 178 aa8.04□□□□□ -1.12
COL4A6-202ENST00000372216 IGKV1D-8A0A087WSZ0 117 aa8.04□□□□□ -1.12
COL4A6-202ENST00000372216 LYPD2Q6UXB3 125 aa8.04□□□□□ -1.12
COL4A6-202ENST00000372216 TRAV13-1A0A0B4J241 112 aa8.04□□□□□ -1.12
COL4A6-202ENST00000372216 EREGO14944 169 aa8.04□□□□□ -1.12
COL4A6-202ENST00000372216 NBL1P41271 181 aa8.04□□□□□ -1.12
COL4A6-202ENST00000372216 SYNJ2BPP57105 145 aa8.04□□□□□ -1.12
COL4A6-202ENST00000372216 TSC2P49815 1807 aa8.04□□□□□ -1.12
COL4A6-202ENST00000372216 C5orf63A6NC05 138 aa8.04□□□□□ -1.12
COL4A6-202ENST00000372216 IGLV2-23P01705 113 aa8.04□□□□□ -1.12
COL4A6-202ENST00000372216 HEPN1Q6WQI6 88 aa8.04□□□□□ -1.12
COL4A6-202ENST00000372216 MBD3L1Q8WWY6 194 aa8.04□□□□□ -1.12
COL4A6-202ENST00000372216 BRWD1Q9NSI6 2320 aa8.04□□□□□ -1.12
COL4A6-202ENST00000372216 HIGD1CA8MV81 97 aa8.04□□□□□ -1.12
COL4A6-202ENST00000372216 CTAG1AP78358 180 aa8.04□□□□□ -1.12
COL4A6-202ENST00000372216 COQ2Q96H96 371 aa8.04□□□□□ -1.12
COL4A6-202ENST00000372216 A0A087WWL8 130 aa8.03□□□□□ -1.12
COL4A6-202ENST00000372216 FAM90A9PA6NNJ1 464 aa8.03□□□□□ -1.12
COL4A6-202ENST00000372216 NCR2O95944 276 aa8.03□□□□□ -1.12
COL4A6-202ENST00000372216 TOMM40O96008 361 aa8.03□□□□□ -1.12
COL4A6-202ENST00000372216 OR2K2Q8NGT1 345 aa8.03□□□□□ -1.12
COL4A6-202ENST00000372216 KNCNA6PVL3 124 aa8.03□□□□□ -1.12
COL4A6-202ENST00000372216 J3QKU1 62 aa8.03□□□□□ -1.12
COL4A6-202ENST00000372216 PSPNO60542 156 aa8.03□□□□□ -1.12
COL4A6-202ENST00000372216 NHLRC3Q5JS37 347 aa8.03□□□□□ -1.12
COL4A6-202ENST00000372216 C10orf55Q5SWW7 151 aa8.03□□□□□ -1.12
COL4A6-202ENST00000372216 GLRX5Q86SX6 157 aa8.03□□□□□ -1.12
COL4A6-202ENST00000372216 DMRT1Q9Y5R6 373 aa8.03□□□□□ -1.12
COL4A6-202ENST00000372216 SEC16AO15027 2179 aa8.03□□□□□ -1.12
COL4A6-202ENST00000372216 BUB1B-PAK6H3BSN5 160 aa8.03□□□□□ -1.12
COL4A6-202ENST00000372216 C1orf159Q96HA4 380 aa8.03□□□□□ -1.12
COL4A6-202ENST00000372216 A0A1B0GUT8 65 aa8.03□□□□□ -1.12
COL4A6-202ENST00000372216 SLC25A48Q6ZT89 311 aaKnown RBP8.03□□□□□ -1.12
COL4A6-202ENST00000372216 CIARTQ8N365 385 aaPredicted RBP8.03□□□□□ -1.12
COL4A6-202ENST00000372216 RPRMLQ8N4K4 120 aa8.03□□□□□ -1.12
COL4A6-202ENST00000372216 DLX4Q92988 240 aaPredicted RBP8.03□□□□□ -1.12
COL4A6-202ENST00000372216 A6NNC1 897 aa8.02□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 80.9 ms