RNA–Protein interactions for RNA: ENST00000371621.4

PTPN1-201, Transcript of protein tyrosine phosphatase, non-receptor type 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN1, Length 4,008 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN1-201ENST00000371621 GAGE5Q13069 117 aa9.73□□□□□ -0.85
PTPN1-201ENST00000371621 GAGE6Q13070 117 aa9.73□□□□□ -0.85
PTPN1-201ENST00000371621 DEFB104AQ8WTQ1 72 aa9.73□□□□□ -0.85
PTPN1-201ENST00000371621 MAP1LC3AQ9H492 121 aa9.73□□□□□ -0.85
PTPN1-201ENST00000371621 PRNDQ9UKY0 176 aa9.73□□□□□ -0.85
PTPN1-201ENST00000371621 TRIOO75962 3097 aa9.73□□□□□ -0.85
PTPN1-201ENST00000371621 H0YJW9 148 aa9.73□□□□□ -0.85
PTPN1-201ENST00000371621 NKX2-8O15522 239 aa9.73□□□□□ -0.85
PTPN1-201ENST00000371621 HOXA3O43365 443 aaPredicted RBP9.73□□□□□ -0.85
PTPN1-201ENST00000371621 PTGDSP41222 190 aa9.73□□□□□ -0.85
PTPN1-201ENST00000371621 RHOGP84095 191 aa9.73□□□□□ -0.85
PTPN1-201ENST00000371621 CHAC1Q9BUX1 264 aa9.73□□□□□ -0.85
PTPN1-201ENST00000371621 PGPEP1Q9NXJ5 209 aa9.73□□□□□ -0.85
PTPN1-201ENST00000371621 CGB1A6NKQ9 187 aa9.72□□□□□ -0.85
PTPN1-201ENST00000371621 EVI2AP22794 236 aa9.72□□□□□ -0.85
PTPN1-201ENST00000371621 TMEM95Q3KNT9 176 aa9.72□□□□□ -0.85
PTPN1-201ENST00000371621 CIARTQ8N365 385 aaPredicted RBP9.72□□□□□ -0.85
PTPN1-201ENST00000371621 ZNF441Q8N8Z8 693 aa9.72□□□□□ -0.85
PTPN1-201ENST00000371621 LINC00470Q9BZP3 86 aa9.72□□□□□ -0.85
PTPN1-201ENST00000371621 SMKR1H3BMG3 65 aa9.72□□□□□ -0.85
PTPN1-201ENST00000371621 HBDP02042 147 aa9.72□□□□□ -0.85
PTPN1-201ENST00000371621 LEPP41159 167 aa9.72□□□□□ -0.85
PTPN1-201ENST00000371621 DLX1P56177 255 aa9.72□□□□□ -0.85
PTPN1-201ENST00000371621 RPL11P62913 178 aaKnown RBP9.72□□□□□ -0.85
PTPN1-201ENST00000371621 VSTM5A8MXK1 200 aa9.72□□□□□ -0.85
PTPN1-201ENST00000371621 D6R8Y8 96 aa9.72□□□□□ -0.85
PTPN1-201ENST00000371621 LINC01565O15544 149 aa9.72□□□□□ -0.85
PTPN1-201ENST00000371621 SMIM17P0DL12 118 aa9.72□□□□□ -0.85
PTPN1-201ENST00000371621 RPS20P60866 119 aaKnown RBP9.72□□□□□ -0.85
PTPN1-201ENST00000371621 RNFT1Q5M7Z0 435 aa9.72□□□□□ -0.85
PTPN1-201ENST00000371621 ORMDL3Q8N138 153 aa9.72□□□□□ -0.85
PTPN1-201ENST00000371621 RNF183Q96D59 192 aa9.72□□□□□ -0.85
PTPN1-201ENST00000371621 UBE2ZQ9H832 354 aaPredicted RBP9.72□□□□□ -0.85
PTPN1-201ENST00000371621 A8MWV9 139 aa9.72□□□□□ -0.85
PTPN1-201ENST00000371621 RNPS1Q15287 305 aaKnown RBP9.72□□□□□ -0.85
PTPN1-201ENST00000371621 LPAL2Q16609 132 aa9.72□□□□□ -0.85
PTPN1-201ENST00000371621 C10orf126Q8N4M7 172 aa9.72□□□□□ -0.85
PTPN1-201ENST00000371621 GPR179Q6PRD1 2367 aa9.72□□□□□ -0.85
PTPN1-201ENST00000371621 DNPH1O43598 174 aa9.71□□□□□ -0.85
PTPN1-201ENST00000371621 LIFP15018 202 aa9.71□□□□□ -0.85
PTPN1-201ENST00000371621 MZT1Q08AG7 82 aa9.71□□□□□ -0.85
PTPN1-201ENST00000371621 OR13A1Q8NGR1 328 aa9.71□□□□□ -0.85
PTPN1-201ENST00000371621 C20orf78Q9BR46 151 aa9.71□□□□□ -0.85
PTPN1-201ENST00000371621 KLK10O43240 276 aa9.71□□□□□ -0.86
PTPN1-201ENST00000371621 LGALS7P47929 136 aa9.71□□□□□ -0.86
PTPN1-201ENST00000371621 KLRB1Q12918 225 aa9.71□□□□□ -0.86
PTPN1-201ENST00000371621 SPINK14Q6IE38 97 aa9.71□□□□□ -0.86
PTPN1-201ENST00000371621 RAB1CQ92928 201 aa9.71□□□□□ -0.86
PTPN1-201ENST00000371621 FNDC1Q4ZHG4 1894 aaPredicted RBP9.71□□□□□ -0.86
PTPN1-201ENST00000371621 DENND4CQ5VZ89 1909 aa9.71□□□□□ -0.86
PTPN1-201ENST00000371621 TICRRQ7Z2Z1 1910 aa9.71□□□□□ -0.86
PTPN1-201ENST00000371621 LINC00473A8K010 186 aa9.71□□□□□ -0.86
PTPN1-201ENST00000371621 TMEM155Q4W5P6 130 aa9.71□□□□□ -0.86
PTPN1-201ENST00000371621 C10orf128Q5T292 105 aa9.71□□□□□ -0.86
PTPN1-201ENST00000371621 PPP1R32Q7Z5V6 425 aa9.71□□□□□ -0.86
PTPN1-201ENST00000371621 ONECUT1Q9UBC0 465 aa9.71□□□□□ -0.86
PTPN1-201ENST00000371621 YLPM1P49750 1951 aaKnown RBP9.71□□□□□ -0.86
PTPN1-201ENST00000371621 GGTLC3B5MD39 225 aa9.7□□□□□ -0.86
PTPN1-201ENST00000371621 MAGEA5P43359 124 aa9.7□□□□□ -0.86
PTPN1-201ENST00000371621 ODF3L1Q8IXM7 274 aa9.7□□□□□ -0.86
PTPN1-201ENST00000371621 OR1L8Q8NGR8 309 aa9.7□□□□□ -0.86
PTPN1-201ENST00000371621 WNK1Q9H4A3 2382 aa9.7□□□□□ -0.86
PTPN1-201ENST00000371621 PLXNA3P51805 1871 aa9.7□□□□□ -0.86
PTPN1-201ENST00000371621 PRSS29PA6NIE9 313 aa9.7□□□□□ -0.86
PTPN1-201ENST00000371621 F5H697 171 aa9.7□□□□□ -0.86
PTPN1-201ENST00000371621 IGHV4-39P01824 125 aa9.7□□□□□ -0.86
PTPN1-201ENST00000371621 HERVK_113P61574 105 aa9.7□□□□□ -0.86
PTPN1-201ENST00000371621 ZNRF1Q8ND25 227 aa9.7□□□□□ -0.86
PTPN1-201ENST00000371621 JMJD8Q96S16 334 aa9.7□□□□□ -0.86
PTPN1-201ENST00000371621 EPDR1Q9UM22 224 aa9.7□□□□□ -0.86
PTPN1-201ENST00000371621 IGHV3-35A0A0C4DH35 117 aa9.7□□□□□ -0.86
PTPN1-201ENST00000371621 COL8A2P25067 703 aa9.7□□□□□ -0.86
PTPN1-201ENST00000371621 AGFG2O95081 481 aa9.69□□□□□ -0.86
PTPN1-201ENST00000371621 LINC00596Q86U02 117 aa9.69□□□□□ -0.86
PTPN1-201ENST00000371621 MDP1Q86V88 176 aa9.69□□□□□ -0.86
PTPN1-201ENST00000371621 ZNF785A8K8V0 405 aa9.69□□□□□ -0.86
PTPN1-201ENST00000371621 F8W1H4 67 aa9.69□□□□□ -0.86
PTPN1-201ENST00000371621 TNFRSF1AP19438 455 aa9.69□□□□□ -0.86
PTPN1-201ENST00000371621 PRDX2P32119 198 aa9.69□□□□□ -0.86
PTPN1-201ENST00000371621 NLRC5Q86WI3 1866 aa9.69□□□□□ -0.86
PTPN1-201ENST00000371621 LINC00310P59036 64 aa9.69□□□□□ -0.86
PTPN1-201ENST00000371621 PLXNA4Q9HCM2 1894 aa9.69□□□□□ -0.86
PTPN1-201ENST00000371621 GAGE12JA6NER3 117 aa9.68□□□□□ -0.86
PTPN1-201ENST00000371621 GAGE7O76087 117 aa9.68□□□□□ -0.86
PTPN1-201ENST00000371621 GAGE12FP0CL80 117 aa9.68□□□□□ -0.86
PTPN1-201ENST00000371621 GAGE12GP0CL81 117 aa9.68□□□□□ -0.86
PTPN1-201ENST00000371621 GAGE12IP0CL82 117 aa9.68□□□□□ -0.86
PTPN1-201ENST00000371621 FOXF2Q12947 444 aa9.68□□□□□ -0.86
PTPN1-201ENST00000371621 GAGE4Q13068 117 aa9.68□□□□□ -0.86
PTPN1-201ENST00000371621 SPANXN1Q5VSR9 72 aa9.68□□□□□ -0.86
PTPN1-201ENST00000371621 GUSBP11Q6P575 273 aa9.68□□□□□ -0.86
PTPN1-201ENST00000371621 REPIN1Q9BWE0 567 aaKnown RBP9.68□□□□□ -0.86
PTPN1-201ENST00000371621 IDI2-AS1Q9NZ38 188 aa9.68□□□□□ -0.86
PTPN1-201ENST00000371621 KIF26AQ9ULI4 1882 aaPredicted RBP9.68□□□□□ -0.86
PTPN1-201ENST00000371621 EFEMP2O95967 443 aa9.68□□□□□ -0.86
PTPN1-201ENST00000371621 CFHR2P36980 270 aa9.68□□□□□ -0.86
PTPN1-201ENST00000371621 TMPRSS3P57727 454 aa9.68□□□□□ -0.86
PTPN1-201ENST00000371621 GLMPQ8WWB7 406 aa9.68□□□□□ -0.86
PTPN1-201ENST00000371621 RASL11BQ9BPW5 248 aa9.68□□□□□ -0.86
PTPN1-201ENST00000371621 PRDM6Q9NQX0 595 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 121.5 ms