RNA–Protein interactions for RNA: ENST00000371447.3

PDE6C-201, Transcript of phosphodiesterase 6C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDE6C, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6C-201ENST00000371447 SIGLEC9Q9Y336 463 aa9.42□□□□□ -0.9
PDE6C-201ENST00000371447 CREBBPQ92793 2442 aa9.42□□□□□ -0.9
PDE6C-201ENST00000371447 PATE2Q6UY27 113 aa9.42□□□□□ -0.9
PDE6C-201ENST00000371447 EAF1Q96JC9 268 aaPredicted RBP9.42□□□□□ -0.9
PDE6C-201ENST00000371447 DOPEY2Q9Y3R5 2298 aa9.42□□□□□ -0.9
PDE6C-201ENST00000371447 TLN2Q9Y4G6 2542 aa9.41□□□□□ -0.9
PDE6C-201ENST00000371447 EPG5Q9HCE0 2579 aa9.41□□□□□ -0.9
PDE6C-201ENST00000371447 VENTXO95231 258 aa9.41□□□□□ -0.9
PDE6C-201ENST00000371447 SRSF12Q8WXF0 261 aaKnown RBP9.41□□□□□ -0.9
PDE6C-201ENST00000371447 ZFHX3Q15911 3703 aa9.41□□□□□ -0.9
PDE6C-201ENST00000371447 IGLC7A0M8Q6 106 aa9.41□□□□□ -0.9
PDE6C-201ENST00000371447 REC114Q7Z4M0 266 aa9.41□□□□□ -0.9
PDE6C-201ENST00000371447 OR1P1Q8NH06 330 aa9.41□□□□□ -0.9
PDE6C-201ENST00000371447 SLC25A2Q9BXI2 301 aa9.41□□□□□ -0.9
PDE6C-201ENST00000371447 TMEM167BQ9NRX6 74 aa9.41□□□□□ -0.9
PDE6C-201ENST00000371447 LOC105371242A0A075B767 164 aa9.4□□□□□ -0.9
PDE6C-201ENST00000371447 SLC25A5P05141 298 aaKnown RBP9.4□□□□□ -0.9
PDE6C-201ENST00000371447 LIPFP07098 398 aa9.4□□□□□ -0.9
PDE6C-201ENST00000371447 HTR1DP28221 377 aa9.4□□□□□ -0.9
PDE6C-201ENST00000371447 MMD2Q8IY49 270 aa9.4□□□□□ -0.9
PDE6C-201ENST00000371447 C22orf15Q8WYQ4 148 aa9.4□□□□□ -0.9
PDE6C-201ENST00000371447 KAAG1Q9UBP8 84 aa9.4□□□□□ -0.9
PDE6C-201ENST00000371447 AMMECR1Q9Y4X0 333 aaPredicted RBP9.4□□□□□ -0.9
PDE6C-201ENST00000371447 PGPA6NDG6 321 aa9.4□□□□□ -0.9
PDE6C-201ENST00000371447 NUPR1O60356 82 aa9.4□□□□□ -0.9
PDE6C-201ENST00000371447 OR1L6Q8NGR2 347 aa9.4□□□□□ -0.9
PDE6C-201ENST00000371447 FAM168AQ92567 244 aa9.4□□□□□ -0.9
PDE6C-201ENST00000371447 WNT10AQ9GZT5 417 aa9.4□□□□□ -0.9
PDE6C-201ENST00000371447 PITPNC1Q9UKF7 332 aa9.4□□□□□ -0.9
PDE6C-201ENST00000371447 CHTOPQ9Y3Y2 248 aaKnown RBP9.4□□□□□ -0.9
PDE6C-201ENST00000371447 ABCA12Q86UK0 2595 aa9.4□□□□□ -0.9
PDE6C-201ENST00000371447 SNURFLB1AK76 121 aa9.39□□□□□ -0.91
PDE6C-201ENST00000371447 HSBP1L1C9JCN9 74 aa9.39□□□□□ -0.91
PDE6C-201ENST00000371447 TSTD3H0UI37 97 aa9.39□□□□□ -0.91
PDE6C-201ENST00000371447 IGLV1-47P01700 117 aa9.39□□□□□ -0.91
PDE6C-201ENST00000371447 AMBPP02760 352 aa9.39□□□□□ -0.91
PDE6C-201ENST00000371447 ADMP35318 185 aa9.39□□□□□ -0.91
PDE6C-201ENST00000371447 LGALS7P47929 136 aa9.39□□□□□ -0.91
PDE6C-201ENST00000371447 ST6GALNAC3Q8NDV1 305 aa9.39□□□□□ -0.91
PDE6C-201ENST00000371447 IGKV1D-37A0A075B6S9 117 aa9.39□□□□□ -0.91
PDE6C-201ENST00000371447 TRAV8-1A0A0A6YYK1 113 aa9.39□□□□□ -0.91
PDE6C-201ENST00000371447 TCRBV4S1A1TA0A5B7 111 aa9.39□□□□□ -0.91
PDE6C-201ENST00000371447 GNLYP22749 145 aa9.39□□□□□ -0.91
PDE6C-201ENST00000371447 ISLRO14498 428 aa9.39□□□□□ -0.91
PDE6C-201ENST00000371447 DDTP30046 118 aa9.39□□□□□ -0.91
PDE6C-201ENST00000371447 CAMPP49913 170 aa9.39□□□□□ -0.91
PDE6C-201ENST00000371447 UCNP55089 124 aa9.39□□□□□ -0.91
PDE6C-201ENST00000371447 BAGE2Q86Y30 109 aa9.39□□□□□ -0.91
PDE6C-201ENST00000371447 NAT8BQ9UHF3 227 aa9.39□□□□□ -0.91
PDE6C-201ENST00000371447 F2Z2F3 143 aa9.38□□□□□ -0.91
PDE6C-201ENST00000371447 NPSP0C0P6 89 aa9.38□□□□□ -0.91
PDE6C-201ENST00000371447 SRP14P37108 136 aaKnown RBP9.38□□□□□ -0.91
PDE6C-201ENST00000371447 CNN1P51911 297 aaKnown RBP9.38□□□□□ -0.91
PDE6C-201ENST00000371447 TMEM30BQ3MIR4 351 aa9.38□□□□□ -0.91
PDE6C-201ENST00000371447 ZNF596Q8TC21 504 aa9.38□□□□□ -0.91
PDE6C-201ENST00000371447 CACNG8Q8WXS5 425 aa9.38□□□□□ -0.91
PDE6C-201ENST00000371447 GGCTO75223 188 aaKnown RBP9.38□□□□□ -0.91
PDE6C-201ENST00000371447 SCGB1D1O95968 90 aa9.38□□□□□ -0.91
PDE6C-201ENST00000371447 GPR6P46095 362 aaPredicted RBP9.38□□□□□ -0.91
PDE6C-201ENST00000371447 MRGPRG-AS1Q2M3A8 158 aa9.38□□□□□ -0.91
PDE6C-201ENST00000371447 BAGE3Q86Y29 109 aa9.38□□□□□ -0.91
PDE6C-201ENST00000371447 FAM167A-AS1Q96KT0 104 aa9.38□□□□□ -0.91
PDE6C-201ENST00000371447 ZNF462Q96JM2 2506 aa9.38□□□□□ -0.91
PDE6C-201ENST00000371447 PSG1P11464 419 aa9.38□□□□□ -0.91
PDE6C-201ENST00000371447 IBA57Q5T440 356 aaKnown RBP9.38□□□□□ -0.91
PDE6C-201ENST00000371447 EXOC3-AS1Q8N2X6 119 aa9.38□□□□□ -0.91
PDE6C-201ENST00000371447 IGSF10Q6WRI0 2623 aa9.37□□□□□ -0.91
PDE6C-201ENST00000371447 ZFP36P26651 326 aaKnown RBP9.37□□□□□ -0.91
PDE6C-201ENST00000371447 COMPP49747 757 aaPredicted RBP9.37□□□□□ -0.91
PDE6C-201ENST00000371447 RPEL1Q2QD12 228 aa9.37□□□□□ -0.91
PDE6C-201ENST00000371447 Q71RC1 249 aaPredicted RBP9.37□□□□□ -0.91
PDE6C-201ENST00000371447 TMEM183AQ8IXX5 376 aa9.37□□□□□ -0.91
PDE6C-201ENST00000371447 MRPL18Q9H0U6 180 aaKnown RBP9.37□□□□□ -0.91
PDE6C-201ENST00000371447 CBLN4Q9NTU7 201 aa9.37□□□□□ -0.91
PDE6C-201ENST00000371447 DPM3Q9P2X0 92 aa9.37□□□□□ -0.91
PDE6C-201ENST00000371447 PTPN13Q12923 2485 aa9.37□□□□□ -0.91
PDE6C-201ENST00000371447 IGHV3OR16-13A0A075B7E8 117 aa9.37□□□□□ -0.91
PDE6C-201ENST00000371447 IGHV3-74A0A0B4J1X5 117 aa9.37□□□□□ -0.91
PDE6C-201ENST00000371447 CORTO00230 105 aa9.37□□□□□ -0.91
PDE6C-201ENST00000371447 TCF21O43680 179 aa9.37□□□□□ -0.91
PDE6C-201ENST00000371447 HYPMO75409 117 aa9.37□□□□□ -0.91
PDE6C-201ENST00000371447 NUTF2P61970 127 aaKnown RBP9.37□□□□□ -0.91
PDE6C-201ENST00000371447 UBE2G1P62253 170 aa9.37□□□□□ -0.91
PDE6C-201ENST00000371447 BCL6BQ8N143 479 aaPredicted RBP9.37□□□□□ -0.91
PDE6C-201ENST00000371447 DYNAPQ8N1N2 210 aa9.37□□□□□ -0.91
PDE6C-201ENST00000371447 LINC00311Q8N616 119 aa9.37□□□□□ -0.91
PDE6C-201ENST00000371447 TIMM8BQ9Y5J9 83 aaPredicted RBP9.37□□□□□ -0.91
PDE6C-201ENST00000371447 C19orf84I3L1E1 186 aa9.36□□□□□ -0.91
PDE6C-201ENST00000371447 TMEM95Q3KNT9 176 aa9.36□□□□□ -0.91
PDE6C-201ENST00000371447 ACTL10Q5JWF8 245 aa9.36□□□□□ -0.91
PDE6C-201ENST00000371447 RNASEH2CQ8TDP1 164 aaKnown RBP9.36□□□□□ -0.91
PDE6C-201ENST00000371447 RASL11BQ9BPW5 248 aa9.36□□□□□ -0.91
PDE6C-201ENST00000371447 HIST1H1BP16401 226 aaKnown RBP9.36□□□□□ -0.91
PDE6C-201ENST00000371447 C17orf77Q96MU5 243 aa9.36□□□□□ -0.91
PDE6C-201ENST00000371447 PYGO2Q9BRQ0 406 aa9.36□□□□□ -0.91
PDE6C-201ENST00000371447 TPPP3Q9BW30 176 aa9.36□□□□□ -0.91
PDE6C-201ENST00000371447 ELOA3CA0A087WX78 387 aaPredicted RBP9.36□□□□□ -0.91
PDE6C-201ENST00000371447 NBEAP1P0C6P0 100 aa9.36□□□□□ -0.91
PDE6C-201ENST00000371447 VMO1Q7Z5L0 202 aa9.36□□□□□ -0.91
PDE6C-201ENST00000371447 TEX45Q8NA69 505 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms