RNA–Protein interactions for RNA: ENST00000371219.2

RBM38-204, Transcript of RNA binding motif protein 38, human

TSL 2 BASIC

Gene RBM38, Length 760 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RBM38-204	ENST00000371219	SLC45A2	Q9UMX9	530 aa		11.19	□□□□□ -0.62
RBM38-204	ENST00000371219	LSM4	Q9Y4Z0	139 aa	Known RBP	11.19	□□□□□ -0.62
RBM38-204	ENST00000371219	TRAV14DV4	A0A0A6YYC5	116 aa		11.18	□□□□□ -0.62
RBM38-204	ENST00000371219	TRAV25	A0A0B4J276	109 aa		11.18	□□□□□ -0.62
RBM38-204	ENST00000371219		A0A1W2PS18	150 aa		11.18	□□□□□ -0.62
RBM38-204	ENST00000371219	SMCO3	A2RU48	225 aa		11.18	□□□□□ -0.62
RBM38-204	ENST00000371219	FAM24A	A6NFZ4	105 aa		11.18	□□□□□ -0.62
RBM38-204	ENST00000371219	MPDU1	O75352	247 aa		11.18	□□□□□ -0.62
RBM38-204	ENST00000371219	CCNK	O75909	580 aa		11.18	□□□□□ -0.62
RBM38-204	ENST00000371219	CST7	O76096	145 aa		11.18	□□□□□ -0.62
RBM38-204	ENST00000371219	PSG1	P11464	419 aa		11.18	□□□□□ -0.62
RBM38-204	ENST00000371219	CRYBB3	P26998	211 aa		11.18	□□□□□ -0.62
RBM38-204	ENST00000371219	EWSR1	Q01844	656 aa	Known RBP eCLIP	11.18	□□□□□ -0.62	1e-6	■■■□□ 17.6
RBM38-204	ENST00000371219	TM4SF20	Q53R12	229 aa		11.18	□□□□□ -0.62
RBM38-204	ENST00000371219	RNF125	Q96EQ8	232 aa		11.18	□□□□□ -0.62
RBM38-204	ENST00000371219	IGHV7-4-1	A0A0J9YVY3	117 aa		11.17	□□□□□ -0.62
RBM38-204	ENST00000371219	IL4	P05112	153 aa		11.17	□□□□□ -0.62
RBM38-204	ENST00000371219	ARL16	Q0P5N6	197 aa		11.17	□□□□□ -0.62
RBM38-204	ENST00000371219	RAB31	Q13636	194 aa		11.17	□□□□□ -0.62
RBM38-204	ENST00000371219	DEFB114	Q30KQ6	69 aa		11.17	□□□□□ -0.62
RBM38-204	ENST00000371219	ADAMTSL5	Q6ZMM2	481 aa		11.17	□□□□□ -0.62
RBM38-204	ENST00000371219		Q6ZNX1	250 aa		11.17	□□□□□ -0.62
RBM38-204	ENST00000371219	ZNF546	Q86UE3	836 aa		11.17	□□□□□ -0.62
RBM38-204	ENST00000371219	TMEM217	Q8N7C4	229 aa		11.17	□□□□□ -0.62
RBM38-204	ENST00000371219	BPIFC	Q8NFQ6	507 aa		11.17	□□□□□ -0.62
RBM38-204	ENST00000371219	CHAC2	Q8WUX2	184 aa		11.17	□□□□□ -0.62
RBM38-204	ENST00000371219	VSIR	Q9H7M9	311 aa		11.17	□□□□□ -0.62
RBM38-204	ENST00000371219	SMPX	Q9UHP9	88 aa		11.17	□□□□□ -0.62
RBM38-204	ENST00000371219	ZNF256	Q9Y2P7	627 aa	Predicted RBP	11.17	□□□□□ -0.62
RBM38-204	ENST00000371219	WI2-2373I1.2	A0A1W2PRP0	233 aa		11.16	□□□□□ -0.62
RBM38-204	ENST00000371219	NPPC	P23582	126 aa		11.16	□□□□□ -0.62
RBM38-204	ENST00000371219	PXDC1	Q5TGL8	231 aa		11.16	□□□□□ -0.62
RBM38-204	ENST00000371219	S100A7A	Q86SG5	101 aa		11.16	□□□□□ -0.62
RBM38-204	ENST00000371219	OR2T35	Q8NGX2	323 aa		11.16	□□□□□ -0.62
RBM38-204	ENST00000371219	WDR83OS	Q9Y284	106 aa		11.16	□□□□□ -0.62
RBM38-204	ENST00000371219	HSPB11	Q9Y547	144 aa		11.16	□□□□□ -0.62
RBM38-204	ENST00000371219	DFFB	O76075	338 aa		11.15	□□□□□ -0.62
RBM38-204	ENST00000371219	HNRNPC	P07910	306 aa	Known RBP eCLIP	11.15	□□□□□ -0.62
RBM38-204	ENST00000371219	RPL12	P30050	165 aa	Known RBP	11.15	□□□□□ -0.62
RBM38-204	ENST00000371219	PLP1	P60201	277 aa		11.15	□□□□□ -0.62
RBM38-204	ENST00000371219	ZNF90	Q03938	601 aa		11.15	□□□□□ -0.62
RBM38-204	ENST00000371219	LAMTOR1	Q6IAA8	161 aa		11.15	□□□□□ -0.62
RBM38-204	ENST00000371219	CYP2G1P	Q6ZSU1	146 aa		11.15	□□□□□ -0.62
RBM38-204	ENST00000371219	OR5C1	Q8NGR4	320 aa		11.15	□□□□□ -0.62
RBM38-204	ENST00000371219	WDR89	Q96FK6	387 aa	Predicted RBP	11.15	□□□□□ -0.62
RBM38-204	ENST00000371219	GRAMD2B	Q96HH9	432 aa		11.15	□□□□□ -0.62
RBM38-204	ENST00000371219	AQP10	Q96PS8	301 aa		11.15	□□□□□ -0.62
RBM38-204	ENST00000371219	KCNIP2	Q9NS61	270 aa		11.15	□□□□□ -0.62
RBM38-204	ENST00000371219	MLX	Q9UH92	298 aa		11.15	□□□□□ -0.62
RBM38-204	ENST00000371219	RABAC1	Q9UI14	185 aa		11.15	□□□□□ -0.62
RBM38-204	ENST00000371219	RNF24	Q9Y225	148 aa		11.15	□□□□□ -0.62
RBM38-204	ENST00000371219		U3KQE9	123 aa		11.15	□□□□□ -0.62
RBM38-204	ENST00000371219	CHEK1	O14757	476 aa		11.14	□□□□□ -0.63
RBM38-204	ENST00000371219	EIF2B2	P49770	351 aa	Known RBP	11.14	□□□□□ -0.63
RBM38-204	ENST00000371219	USF2	Q15853	346 aa	Predicted RBP	11.14	□□□□□ -0.63
RBM38-204	ENST00000371219	CD300E	Q496F6	205 aa	Predicted RBP	11.14	□□□□□ -0.63
RBM38-204	ENST00000371219	BTNL8	Q6UX41	500 aa		11.14	□□□□□ -0.63
RBM38-204	ENST00000371219	SPAG8	Q99932	426 aa	Predicted RBP	11.14	□□□□□ -0.63
RBM38-204	ENST00000371219	RHPN1-AS1	Q9BWJ2	59 aa		11.14	□□□□□ -0.63
RBM38-204	ENST00000371219	IGHV3OR16-8	A0A075B7F1	116 aa		11.13	□□□□□ -0.63
RBM38-204	ENST00000371219	UBE2L5P	A0A1B0GUS4	154 aa		11.13	□□□□□ -0.63
RBM38-204	ENST00000371219	TSPAN4	O14817	238 aa		11.13	□□□□□ -0.63
RBM38-204	ENST00000371219	KRTAP10-11	P60412	298 aa		11.13	□□□□□ -0.63
RBM38-204	ENST00000371219	NHLH2	Q02577	135 aa		11.13	□□□□□ -0.63
RBM38-204	ENST00000371219	C1orf194	Q5T5A4	169 aa		11.13	□□□□□ -0.63
RBM38-204	ENST00000371219	RBPMS2	Q6ZRY4	209 aa	Known RBP	11.13	□□□□□ -0.63
RBM38-204	ENST00000371219	TMEM61	Q8N0U2	210 aa		11.13	□□□□□ -0.63
RBM38-204	ENST00000371219	INO80E	Q8NBZ0	244 aa	Predicted RBP	11.13	□□□□□ -0.63
RBM38-204	ENST00000371219	ATP5S	Q99766	215 aa		11.13	□□□□□ -0.63
RBM38-204	ENST00000371219	PARD6G	Q9BYG4	376 aa	Predicted RBP	11.13	□□□□□ -0.63
RBM38-204	ENST00000371219	TRAV2	A0A0B4J234	112 aa		11.12	□□□□□ -0.63
RBM38-204	ENST00000371219	AGPAT2	O15120	278 aa		11.12	□□□□□ -0.63
RBM38-204	ENST00000371219	ZNF207	O43670	478 aa	Known RBP	11.12	□□□□□ -0.63
RBM38-204	ENST00000371219	LINC00869	P0C866	280 aa		11.12	□□□□□ -0.63
RBM38-204	ENST00000371219	GP9	P14770	177 aa		11.12	□□□□□ -0.63
RBM38-204	ENST00000371219	CAMLG	P49069	296 aa		11.12	□□□□□ -0.63
RBM38-204	ENST00000371219	LYZ	P61626	148 aa		11.12	□□□□□ -0.63
RBM38-204	ENST00000371219	MGST2	Q99735	147 aa		11.12	□□□□□ -0.63
RBM38-204	ENST00000371219	FBXL17	Q9UF56	701 aa		11.12	□□□□□ -0.63
RBM38-204	ENST00000371219	HELT	A6NFD8	242 aa		11.11	□□□□□ -0.63
RBM38-204	ENST00000371219		G3V3Q6	166 aa		11.11	□□□□□ -0.63
RBM38-204	ENST00000371219	EDN2	P20800	178 aa		11.11	□□□□□ -0.63
RBM38-204	ENST00000371219	RPL29	P47914	159 aa	Known RBP	11.11	□□□□□ -0.63
RBM38-204	ENST00000371219	AP2S1	P53680	142 aa	Predicted RBP	11.11	□□□□□ -0.63
RBM38-204	ENST00000371219	ZNF266	Q14584	549 aa		11.11	□□□□□ -0.63
RBM38-204	ENST00000371219	OPCML	Q14982	345 aa		11.11	□□□□□ -0.63
RBM38-204	ENST00000371219	GTSCR1	Q86UQ5	136 aa		11.11	□□□□□ -0.63
RBM38-204	ENST00000371219	ST8SIA2	Q92186	375 aa		11.11	□□□□□ -0.63
RBM38-204	ENST00000371219	FAM110A	Q9BQ89	295 aa		11.11	□□□□□ -0.63
RBM38-204	ENST00000371219	GGTLC1	Q9BX51	225 aa		11.11	□□□□□ -0.63
RBM38-204	ENST00000371219	NPCDR1	Q9BY65	106 aa		11.11	□□□□□ -0.63
RBM38-204	ENST00000371219	AURKAIP1	Q9NWT8	199 aa	Predicted RBP	11.11	□□□□□ -0.63
RBM38-204	ENST00000371219	TNFSF18	Q9UNG2	199 aa		11.11	□□□□□ -0.63
RBM38-204	ENST00000371219	ELOA3C	A0A087WX78	387 aa	Predicted RBP	11.1	□□□□□ -0.63
RBM38-204	ENST00000371219	BUB3	O43684	328 aa		11.1	□□□□□ -0.63
RBM38-204	ENST00000371219	FGF7	P21781	194 aa		11.1	□□□□□ -0.63
RBM38-204	ENST00000371219	PRR20E	P86478	221 aa		11.1	□□□□□ -0.63
RBM38-204	ENST00000371219	PRR20C	P86479	221 aa		11.1	□□□□□ -0.63
RBM38-204	ENST00000371219	PRR20D	P86480	221 aa		11.1	□□□□□ -0.63
RBM38-204	ENST00000371219	PRR20B	P86481	221 aa		11.1	□□□□□ -0.63

Retrieved 100 of 20,778 RNA–protein pairs in 101.8 ms