RNA–Protein interactions for RNA: ENST00000369622.7

SYNCRIP-202, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SYNCRIP, Length 3,023 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-202ENST00000369622 TEX45Q8NA69 505 aa13□□□□□ -0.33
SYNCRIP-202ENST00000369622 PLEKHA3Q9HB20 300 aa13□□□□□ -0.33
SYNCRIP-202ENST00000369622 GAGE12HA6NDE8 117 aa13□□□□□ -0.33
SYNCRIP-202ENST00000369622 KIR3DS1Q14943 382 aa13□□□□□ -0.33
SYNCRIP-202ENST00000369622 SHISA2Q6UWI4 295 aa13□□□□□ -0.33
SYNCRIP-202ENST00000369622 C1orf159Q96HA4 380 aa13□□□□□ -0.33
SYNCRIP-202ENST00000369622 SCRT2Q9NQ03 307 aa13□□□□□ -0.33
SYNCRIP-202ENST00000369622 ZNF355PQ9NSJ1 428 aa13□□□□□ -0.33
SYNCRIP-202ENST00000369622 ATP5G2Q06055 141 aa12.99□□□□□ -0.33
SYNCRIP-202ENST00000369622 SNRNP40Q96DI7 357 aaKnown RBP12.99□□□□□ -0.33
SYNCRIP-202ENST00000369622 TRAV9-1A0A075B6T8 112 aa12.99□□□□□ -0.33
SYNCRIP-202ENST00000369622 C9orf118A6NHY6 69 aa12.99□□□□□ -0.33
SYNCRIP-202ENST00000369622 KLK10O43240 276 aa12.99□□□□□ -0.33
SYNCRIP-202ENST00000369622 LEPROTL1O95214 131 aa12.99□□□□□ -0.33
SYNCRIP-202ENST00000369622 IGHV3-48P01763 117 aa12.99□□□□□ -0.33
SYNCRIP-202ENST00000369622 CSN3P07498 182 aa12.99□□□□□ -0.33
SYNCRIP-202ENST00000369622 HSPE1P61604 102 aaKnown RBP12.99□□□□□ -0.33
SYNCRIP-202ENST00000369622 IBA57Q5T440 356 aaKnown RBP12.99□□□□□ -0.33
SYNCRIP-202ENST00000369622 LINC00479Q96M42 142 aa12.99□□□□□ -0.33
SYNCRIP-202ENST00000369622 GEMIN7Q9H840 131 aaKnown RBP12.99□□□□□ -0.33
SYNCRIP-202ENST00000369622 J3QR06 171 aa12.99□□□□□ -0.33
SYNCRIP-202ENST00000369622 C2orf91Q6ZV80 131 aa12.99□□□□□ -0.33
SYNCRIP-202ENST00000369622 OR52E5Q8NH55 327 aa12.99□□□□□ -0.33
SYNCRIP-202ENST00000369622 C15orf61A6NNL5 157 aa12.98□□□□□ -0.33
SYNCRIP-202ENST00000369622 K7EMI3 77 aa12.98□□□□□ -0.33
SYNCRIP-202ENST00000369622 F2RL2O00254 374 aa12.98□□□□□ -0.33
SYNCRIP-202ENST00000369622 FAM90A1Q86YD7 464 aa12.98□□□□□ -0.33
SYNCRIP-202ENST00000369622 FAM222BQ8WU58 562 aa12.98□□□□□ -0.33
SYNCRIP-202ENST00000369622 URB1-AS1Q96HZ7 61 aa12.98□□□□□ -0.33
SYNCRIP-202ENST00000369622 CCL13Q99616 98 aa12.98□□□□□ -0.33
SYNCRIP-202ENST00000369622 PRSS46E5RG02 174 aa12.98□□□□□ -0.33
SYNCRIP-202ENST00000369622 MZT1Q08AG7 82 aa12.98□□□□□ -0.33
SYNCRIP-202ENST00000369622 TCF24Q7RTU0 167 aa12.98□□□□□ -0.33
SYNCRIP-202ENST00000369622 SRSF8Q9BRL6 282 aaKnown RBP12.98□□□□□ -0.33
SYNCRIP-202ENST00000369622 ZNF71Q9NQZ8 489 aaPredicted RBP12.98□□□□□ -0.33
SYNCRIP-202ENST00000369622 PRR33A8MZF0 331 aa12.97□□□□□ -0.33
SYNCRIP-202ENST00000369622 IGKV1-16P04430 117 aa12.97□□□□□ -0.33
SYNCRIP-202ENST00000369622 DEFB109BQ30KR1 87 aa12.97□□□□□ -0.33
SYNCRIP-202ENST00000369622 TIGITQ495A1 244 aa12.97□□□□□ -0.33
SYNCRIP-202ENST00000369622 SGK494Q96LW2 274 aa12.97□□□□□ -0.33
SYNCRIP-202ENST00000369622 NABP2Q9BQ15 211 aa12.97□□□□□ -0.33
SYNCRIP-202ENST00000369622 TMEM191AQ9H0A3 160 aa12.97□□□□□ -0.33
SYNCRIP-202ENST00000369622 TRGV10A0A0A0MS01 117 aa12.97□□□□□ -0.33
SYNCRIP-202ENST00000369622 ZNF137PP52743 207 aa12.97□□□□□ -0.33
SYNCRIP-202ENST00000369622 DMXL2Q8TDJ6 3036 aa12.97□□□□□ -0.33
SYNCRIP-202ENST00000369622 COL27A1Q8IZC6 1860 aaPredicted RBP12.97□□□□□ -0.33
SYNCRIP-202ENST00000369622 WT1P19544 449 aaPredicted RBP12.97□□□□□ -0.33
SYNCRIP-202ENST00000369622 MBNL2Q5VZF2 373 aaKnown RBP12.97□□□□□ -0.33
SYNCRIP-202ENST00000369622 RPRMLQ8N4K4 120 aa12.97□□□□□ -0.33
SYNCRIP-202ENST00000369622 RIF1Q5UIP0 2472 aaKnown RBP12.96□□□□□ -0.33
SYNCRIP-202ENST00000369622 DSCAMO60469 2012 aa12.96□□□□□ -0.33
SYNCRIP-202ENST00000369622 IGHG3P01860 377 aa12.96□□□□□ -0.33
SYNCRIP-202ENST00000369622 REG1BP48304 166 aa12.96□□□□□ -0.33
SYNCRIP-202ENST00000369622 SH2D6Q7Z4S9 175 aa12.96□□□□□ -0.33
SYNCRIP-202ENST00000369622 FAM216BQ8N7L0 139 aa12.96□□□□□ -0.33
SYNCRIP-202ENST00000369622 IDI2-AS1Q9NZ38 188 aa12.96□□□□□ -0.33
SYNCRIP-202ENST00000369622 F11RQ9Y624 299 aaKnown RBP12.96□□□□□ -0.33
SYNCRIP-202ENST00000369622 IGHV1-24A0A0C4DH33 117 aa12.96□□□□□ -0.34
SYNCRIP-202ENST00000369622 C17orf58Q2M2W7 97 aa12.96□□□□□ -0.34
SYNCRIP-202ENST00000369622 ADAMTSL5Q6ZMM2 481 aa12.96□□□□□ -0.34
SYNCRIP-202ENST00000369622 TXNDC17Q9BRA2 123 aa12.96□□□□□ -0.34
SYNCRIP-202ENST00000369622 SAP30LQ9HAJ7 183 aa12.96□□□□□ -0.34
SYNCRIP-202ENST00000369622 TRAV17A0A0B4J275 112 aa12.95□□□□□ -0.34
SYNCRIP-202ENST00000369622 FAM120AOSQ5T036 256 aa12.95□□□□□ -0.34
SYNCRIP-202ENST00000369622 OR9G1Q8NH87 305 aa12.95□□□□□ -0.34
SYNCRIP-202ENST00000369622 PLXNB1O43157 2135 aa12.95□□□□□ -0.34
SYNCRIP-202ENST00000369622 ZCCHC24Q8N2G6 241 aaKnown RBP12.95□□□□□ -0.34
SYNCRIP-202ENST00000369622 RABAC1Q9UI14 185 aa12.95□□□□□ -0.34
SYNCRIP-202ENST00000369622 KBTBD11-OT1A0A1B0GTJ5 212 aa12.94□□□□□ -0.34
SYNCRIP-202ENST00000369622 IGLV1-44P01699 117 aa12.94□□□□□ -0.34
SYNCRIP-202ENST00000369622 TMPRSS3P57727 454 aa12.94□□□□□ -0.34
SYNCRIP-202ENST00000369622 C1orf162Q8NEQ5 155 aaPredicted RBP12.94□□□□□ -0.34
SYNCRIP-202ENST00000369622 VSTM2AQ8TAG5 236 aa12.94□□□□□ -0.34
SYNCRIP-202ENST00000369622 FAM90A9PA6NNJ1 464 aa12.94□□□□□ -0.34
SYNCRIP-202ENST00000369622 SRRM4A7MD48 611 aaKnown RBP12.94□□□□□ -0.34
SYNCRIP-202ENST00000369622 DDB2Q92466 427 aa12.94□□□□□ -0.34
SYNCRIP-202ENST00000369622 SLC25A15Q9Y619 301 aa12.94□□□□□ -0.34
SYNCRIP-202ENST00000369622 DMXL1Q9Y485 3027 aa12.94□□□□□ -0.34
SYNCRIP-202ENST00000369622 ADGRG4Q8IZF6 3080 aa12.94□□□□□ -0.34
SYNCRIP-202ENST00000369622 IGKV1OR2-108A0A075B7D4 117 aa12.94□□□□□ -0.34
SYNCRIP-202ENST00000369622 A0A1W2PRE2 83 aa12.94□□□□□ -0.34
SYNCRIP-202ENST00000369622 KIR2DS2P43631 304 aa12.94□□□□□ -0.34
SYNCRIP-202ENST00000369622 GUSBP1Q15486 140 aa12.94□□□□□ -0.34
SYNCRIP-202ENST00000369622 TMEM249Q2WGJ8 235 aa12.94□□□□□ -0.34
SYNCRIP-202ENST00000369622 TMEM14BQ9NUH8 114 aa12.94□□□□□ -0.34
SYNCRIP-202ENST00000369622 DKK4Q9UBT3 224 aa12.94□□□□□ -0.34
SYNCRIP-202ENST00000369622 PIEZO2Q9H5I5 2752 aa12.93□□□□□ -0.34
SYNCRIP-202ENST00000369622 TRAV5A0A0B4J249 113 aa12.93□□□□□ -0.34
SYNCRIP-202ENST00000369622 CCL8P80075 99 aa12.93□□□□□ -0.34
SYNCRIP-202ENST00000369622 WFDC2Q14508 124 aa12.93□□□□□ -0.34
SYNCRIP-202ENST00000369622 PSG3Q16557 428 aa12.93□□□□□ -0.34
SYNCRIP-202ENST00000369622 CD300EQ496F6 205 aaPredicted RBP12.93□□□□□ -0.34
SYNCRIP-202ENST00000369622 PTPRBP23467 1997 aa12.93□□□□□ -0.34
SYNCRIP-202ENST00000369622 TNFAIP6P98066 277 aaPredicted RBP12.93□□□□□ -0.34
SYNCRIP-202ENST00000369622 DEFB124Q8NES8 71 aa12.93□□□□□ -0.34
SYNCRIP-202ENST00000369622 TRGV8A0A0C4DH27 118 aa12.92□□□□□ -0.34
SYNCRIP-202ENST00000369622 HLA-DRB1P01911 266 aa12.92□□□□□ -0.34
SYNCRIP-202ENST00000369622 FCGR2BP31994 310 aaPredicted RBP12.92□□□□□ -0.34
SYNCRIP-202ENST00000369622 INSL3P51460 131 aa12.92□□□□□ -0.34
SYNCRIP-202ENST00000369622 A0A1W2PPM0 123 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms