RNA–Protein interactions for RNA: ENST00000368545.7

TPM3-213, Transcript of tropomyosin 3, humanhuman

TSL 1 (best)

Gene TPM3, Length 2,147 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-213ENST00000368545 MBP02144 154 aa6.89□□□□□ -1.31
TPM3-213ENST00000368545 ZNF616Q08AN1 781 aa6.89□□□□□ -1.31
TPM3-213ENST00000368545 AANATQ16613 207 aa6.89□□□□□ -1.31
TPM3-213ENST00000368545 C5orf64Q2M2E5 130 aa6.89□□□□□ -1.31
TPM3-213ENST00000368545 UQCC3Q6UW78 93 aa6.89□□□□□ -1.31
TPM3-213ENST00000368545 LFNGQ8NES3 379 aa6.89□□□□□ -1.31
TPM3-213ENST00000368545 OR10W1Q8NGF6 305 aa6.89□□□□□ -1.31
TPM3-213ENST00000368545 RNASEH2CQ8TDP1 164 aaKnown RBP6.89□□□□□ -1.31
TPM3-213ENST00000368545 MARC2Q969Z3 335 aa6.89□□□□□ -1.31
TPM3-213ENST00000368545 NPVFQ9HCQ7 196 aa6.89□□□□□ -1.31
TPM3-213ENST00000368545 CR1P17927 2039 aa6.89□□□□□ -1.31
TPM3-213ENST00000368545 CORTO00230 105 aa6.89□□□□□ -1.31
TPM3-213ENST00000368545 GNB1P62873 340 aa6.89□□□□□ -1.31
TPM3-213ENST00000368545 WT1-ASQ06250 92 aa6.89□□□□□ -1.31
TPM3-213ENST00000368545 TMEM41BQ5BJD5 291 aa6.89□□□□□ -1.31
TPM3-213ENST00000368545 C10orf55Q5SWW7 151 aa6.89□□□□□ -1.31
TPM3-213ENST00000368545 PRR27Q6MZM9 219 aa6.89□□□□□ -1.31
TPM3-213ENST00000368545 BTNL8Q6UX41 500 aa6.89□□□□□ -1.31
TPM3-213ENST00000368545 FAM213BQ8TBF2 198 aa6.89□□□□□ -1.31
TPM3-213ENST00000368545 SRSF12Q8WXF0 261 aaKnown RBP6.89□□□□□ -1.31
TPM3-213ENST00000368545 CACNG8Q8WXS5 425 aa6.89□□□□□ -1.31
TPM3-213ENST00000368545 DNAJC4Q9NNZ3 241 aa6.89□□□□□ -1.31
TPM3-213ENST00000368545 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP6.89□□□□□ -1.319e-7■■■□□ 15.1
TPM3-213ENST00000368545 A0A1B0GW64 132 aa6.88□□□□□ -1.31
TPM3-213ENST00000368545 IGLC7A0M8Q6 106 aa6.88□□□□□ -1.31
TPM3-213ENST00000368545 BTBD17A6NE02 478 aa6.88□□□□□ -1.31
TPM3-213ENST00000368545 TEX46H3BTG2 121 aa6.88□□□□□ -1.31
TPM3-213ENST00000368545 HBE1P02100 147 aa6.88□□□□□ -1.31
TPM3-213ENST00000368545 OR13C7P0DN81 318 aa6.88□□□□□ -1.31
TPM3-213ENST00000368545 GPX4P36969 197 aaPredicted RBP6.88□□□□□ -1.31
TPM3-213ENST00000368545 RAB2AP61019 212 aa6.88□□□□□ -1.31
TPM3-213ENST00000368545 AKR1C1Q04828 323 aa6.88□□□□□ -1.31
TPM3-213ENST00000368545 RAB31Q13636 194 aa6.88□□□□□ -1.31
TPM3-213ENST00000368545 HNF4GQ14541 408 aa6.88□□□□□ -1.31
TPM3-213ENST00000368545 I3L521 148 aa6.88□□□□□ -1.31
TPM3-213ENST00000368545 CNIH1O95406 144 aa6.88□□□□□ -1.31
TPM3-213ENST00000368545 S100A6P06703 90 aa6.88□□□□□ -1.31
TPM3-213ENST00000368545 PVRIGQ6DKI7 326 aa6.88□□□□□ -1.31
TPM3-213ENST00000368545 TMEM144Q7Z5S9 345 aa6.88□□□□□ -1.31
TPM3-213ENST00000368545 OR1P1Q8NH06 330 aa6.88□□□□□ -1.31
TPM3-213ENST00000368545 P2RX4Q99571 388 aa6.88□□□□□ -1.31
TPM3-213ENST00000368545 CSMD2Q7Z408 3487 aa6.87□□□□□ -1.31
TPM3-213ENST00000368545 NCBP2LA6PVI3 153 aaKnown RBP6.87□□□□□ -1.31
TPM3-213ENST00000368545 KRBOX1C9JBD0 128 aa6.87□□□□□ -1.31
TPM3-213ENST00000368545 CSN3P07498 182 aa6.87□□□□□ -1.31
TPM3-213ENST00000368545 CD24P25063 80 aa6.87□□□□□ -1.31
TPM3-213ENST00000368545 OPRK1P41145 380 aa6.87□□□□□ -1.31
TPM3-213ENST00000368545 FHITP49789 147 aa6.87□□□□□ -1.31
TPM3-213ENST00000368545 SSBP2P81877 361 aaPredicted RBP6.87□□□□□ -1.31
TPM3-213ENST00000368545 RUSC1-AS1Q66K80 236 aa6.87□□□□□ -1.31
TPM3-213ENST00000368545 ZNF562Q6V9R5 426 aa6.87□□□□□ -1.31
TPM3-213ENST00000368545 OR1L6Q8NGR2 347 aa6.87□□□□□ -1.31
TPM3-213ENST00000368545 SLC35E1Q96K37 410 aa6.87□□□□□ -1.31
TPM3-213ENST00000368545 RFNGQ9Y644 331 aa6.87□□□□□ -1.31
TPM3-213ENST00000368545 PLXNB1O43157 2135 aa6.87□□□□□ -1.31
TPM3-213ENST00000368545 FCN1O00602 326 aa6.86□□□□□ -1.31
TPM3-213ENST00000368545 HLA-DRB1P01911 266 aa6.86□□□□□ -1.31
TPM3-213ENST00000368545 FBP1P09467 338 aa6.86□□□□□ -1.31
TPM3-213ENST00000368545 AREGP15514 252 aa6.86□□□□□ -1.31
TPM3-213ENST00000368545 PAX6P26367 422 aa6.86□□□□□ -1.31
TPM3-213ENST00000368545 ELLP55199 621 aaPredicted RBP6.86□□□□□ -1.31
TPM3-213ENST00000368545 FXYD3Q14802 87 aa6.86□□□□□ -1.31
TPM3-213ENST00000368545 ACOT6Q3I5F7 207 aaPredicted RBP6.86□□□□□ -1.31
TPM3-213ENST00000368545 FFAR4Q5NUL3 377 aa6.86□□□□□ -1.31
TPM3-213ENST00000368545 PIK3CD-AS1Q5SR53 167 aa6.86□□□□□ -1.31
TPM3-213ENST00000368545 SLC16A13Q7RTY0 426 aa6.86□□□□□ -1.31
TPM3-213ENST00000368545 Q8N9W7 124 aa6.86□□□□□ -1.31
TPM3-213ENST00000368545 SSMEM1Q8WWF3 244 aa6.86□□□□□ -1.31
TPM3-213ENST00000368545 GGTLC1Q9BX51 225 aa6.86□□□□□ -1.31
TPM3-213ENST00000368545 F11RQ9Y624 299 aaKnown RBP6.86□□□□□ -1.31
TPM3-213ENST00000368545 ANK2Q01484 3957 aa6.86□□□□□ -1.31
TPM3-213ENST00000368545 TRAV1-1A0A0B4J248 108 aa6.86□□□□□ -1.31
TPM3-213ENST00000368545 IGHV4-38-2P0DP08 117 aa6.86□□□□□ -1.31
TPM3-213ENST00000368545 M6PRP20645 277 aa6.86□□□□□ -1.31
TPM3-213ENST00000368545 ZP3P21754 424 aa6.86□□□□□ -1.31
TPM3-213ENST00000368545 CD81P60033 236 aa6.86□□□□□ -1.31
TPM3-213ENST00000368545 MAJINQ3KP22 176 aa6.86□□□□□ -1.31
TPM3-213ENST00000368545 C22orf15Q8WYQ4 148 aa6.86□□□□□ -1.31
TPM3-213ENST00000368545 ARPC1AQ92747 370 aa6.86□□□□□ -1.31
TPM3-213ENST00000368545 MGST2Q99735 147 aa6.86□□□□□ -1.31
TPM3-213ENST00000368545 RASL11BQ9BPW5 248 aa6.86□□□□□ -1.31
TPM3-213ENST00000368545 PBDC1Q9BVG4 233 aa6.86□□□□□ -1.31
TPM3-213ENST00000368545 RPRMQ9NS64 109 aa6.86□□□□□ -1.31
TPM3-213ENST00000368545 AGPAT2O15120 278 aa6.85□□□□□ -1.31
TPM3-213ENST00000368545 CYB5BO43169 146 aa6.85□□□□□ -1.31
TPM3-213ENST00000368545 REG1AP05451 166 aa6.85□□□□□ -1.31
TPM3-213ENST00000368545 CTRB1P17538 263 aa6.85□□□□□ -1.31
TPM3-213ENST00000368545 RPL29P47914 159 aaKnown RBP6.85□□□□□ -1.31
TPM3-213ENST00000368545 HILS1P60008 231 aa6.85□□□□□ -1.31
TPM3-213ENST00000368545 CTRB2Q6GPI1 263 aa6.85□□□□□ -1.31
TPM3-213ENST00000368545 BRD3OSQ6XYD6 125 aa6.85□□□□□ -1.31
TPM3-213ENST00000368545 MBD3L1Q8WWY6 194 aa6.85□□□□□ -1.31
TPM3-213ENST00000368545 MAP6D1Q9H9H5 199 aa6.85□□□□□ -1.31
TPM3-213ENST00000368545 IGHV3OR16-10A0A075B7F0 116 aa6.85□□□□□ -1.31
TPM3-213ENST00000368545 CTXND1A0A1B0GTU2 59 aa6.85□□□□□ -1.31
TPM3-213ENST00000368545 A0A1B0GUS0 222 aa6.85□□□□□ -1.31
TPM3-213ENST00000368545 CX3CL1P78423 397 aa6.85□□□□□ -1.31
TPM3-213ENST00000368545 C1QL4Q86Z23 238 aa6.85□□□□□ -1.31
TPM3-213ENST00000368545 MAPK1IP1LQ8NDC0 245 aa6.85□□□□□ -1.31
TPM3-213ENST00000368545 OR10G4Q8NGN3 311 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms