RNA–Protein interactions for RNA: ENST00000368530.6

TPM3-210, Transcript of tropomyosin 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TPM3, Length 1,523 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-210ENST00000368530 GPX4P36969 197 aaPredicted RBP7.78□□□□□ -1.16
TPM3-210ENST00000368530 B2MP61769 119 aa7.78□□□□□ -1.16
TPM3-210ENST00000368530 EBI3Q14213 229 aa7.78□□□□□ -1.16
TPM3-210ENST00000368530 TMEM95Q3KNT9 176 aa7.78□□□□□ -1.16
TPM3-210ENST00000368530 TMEM144Q7Z5S9 345 aa7.78□□□□□ -1.16
TPM3-210ENST00000368530 STPG3Q8N7X2 389 aa7.78□□□□□ -1.16
TPM3-210ENST00000368530 PRSS22Q9GZN4 317 aa7.78□□□□□ -1.16
TPM3-210ENST00000368530 MRPL36Q9P0J6 103 aaKnown RBP7.78□□□□□ -1.16
TPM3-210ENST00000368530 IGKV1OR2-108A0A075B7D4 117 aa7.77□□□□□ -1.17
TPM3-210ENST00000368530 SH2D7A6NKC9 451 aaPredicted RBP7.77□□□□□ -1.17
TPM3-210ENST00000368530 ZFP92A6NM28 416 aa7.77□□□□□ -1.17
TPM3-210ENST00000368530 CYB5BO43169 146 aa7.77□□□□□ -1.17
TPM3-210ENST00000368530 CDC34P49427 236 aaPredicted RBP7.77□□□□□ -1.17
TPM3-210ENST00000368530 RND2P52198 227 aa7.77□□□□□ -1.17
TPM3-210ENST00000368530 KRTAP10-11P60412 298 aa7.77□□□□□ -1.17
TPM3-210ENST00000368530 CX3CL1P78423 397 aa7.77□□□□□ -1.17
TPM3-210ENST00000368530 NDPQ00604 133 aa7.77□□□□□ -1.17
TPM3-210ENST00000368530 ZNF114Q8NC26 417 aa7.77□□□□□ -1.17
TPM3-210ENST00000368530 RXFP4Q8TDU9 374 aa7.77□□□□□ -1.17
TPM3-210ENST00000368530 CACNG8Q8WXS5 425 aa7.77□□□□□ -1.17
TPM3-210ENST00000368530 NPIPB3Q92617 1050 aa7.77□□□□□ -1.17
TPM3-210ENST00000368530 ARPC1AQ92747 370 aa7.77□□□□□ -1.17
TPM3-210ENST00000368530 RAB24Q969Q5 203 aa7.77□□□□□ -1.17
TPM3-210ENST00000368530 SLC25A33Q9BSK2 321 aa7.77□□□□□ -1.17
TPM3-210ENST00000368530 TMPRSS5Q9H3S3 457 aa7.77□□□□□ -1.17
TPM3-210ENST00000368530 KCNIP2Q9NS61 270 aa7.77□□□□□ -1.17
TPM3-210ENST00000368530 DMRT1Q9Y5R6 373 aa7.77□□□□□ -1.17
TPM3-210ENST00000368530 F11RQ9Y624 299 aaKnown RBP7.77□□□□□ -1.17
TPM3-210ENST00000368530 TRAV1-1A0A0B4J248 108 aa7.76□□□□□ -1.17
TPM3-210ENST00000368530 A0A1W2PPV4 95 aa7.76□□□□□ -1.17
TPM3-210ENST00000368530 LINC00869P0C866 280 aa7.76□□□□□ -1.17
TPM3-210ENST00000368530 CEBPGP53567 150 aa7.76□□□□□ -1.17
TPM3-210ENST00000368530 ICAM4Q14773 271 aa7.76□□□□□ -1.17
TPM3-210ENST00000368530 GUCA2BQ16661 112 aa7.76□□□□□ -1.17
TPM3-210ENST00000368530 SPATA31B1PQ5VZV4 182 aa7.76□□□□□ -1.17
TPM3-210ENST00000368530 Q8N9W7 124 aa7.76□□□□□ -1.17
TPM3-210ENST00000368530 OR5AU1Q8NGC0 362 aa7.76□□□□□ -1.17
TPM3-210ENST00000368530 OR1P1Q8NH06 330 aa7.76□□□□□ -1.17
TPM3-210ENST00000368530 RASL11BQ9BPW5 248 aa7.76□□□□□ -1.17
TPM3-210ENST00000368530 SLC45A2Q9UMX9 530 aa7.76□□□□□ -1.17
TPM3-210ENST00000368530 LOC102723971A0A1B0GUV8 181 aa7.75□□□□□ -1.17
TPM3-210ENST00000368530 WI2-2373I1.2A0A1W2PRP0 233 aa7.75□□□□□ -1.17
TPM3-210ENST00000368530 MT-CO2P00403 227 aa7.75□□□□□ -1.17
TPM3-210ENST00000368530 RPL29P47914 159 aaKnown RBP7.75□□□□□ -1.17
TPM3-210ENST00000368530 ZNF506Q5JVG8 444 aa7.75□□□□□ -1.17
TPM3-210ENST00000368530 ETFRF1Q6IPR1 90 aa7.75□□□□□ -1.17
TPM3-210ENST00000368530 ATRAIDQ6UW56 229 aa7.75□□□□□ -1.17
TPM3-210ENST00000368530 ZNF562Q6V9R5 426 aa7.75□□□□□ -1.17
TPM3-210ENST00000368530 CYP2G1PQ6ZSU1 146 aa7.75□□□□□ -1.17
TPM3-210ENST00000368530 GATAD1Q8WUU5 269 aa7.75□□□□□ -1.17
TPM3-210ENST00000368530 HSPB9Q9BQS6 159 aa7.75□□□□□ -1.17
TPM3-210ENST00000368530 PITPNC1Q9UKF7 332 aa7.75□□□□□ -1.17
TPM3-210ENST00000368530 IGHV7-81A0A0B4J1V7 117 aa7.74□□□□□ -1.17
TPM3-210ENST00000368530 A0A1W2PRX2 142 aa7.74□□□□□ -1.17
TPM3-210ENST00000368530 SEC14L6B5MCN3 397 aa7.74□□□□□ -1.17
TPM3-210ENST00000368530 SOX15O60248 233 aa7.74□□□□□ -1.17
TPM3-210ENST00000368530 IFNA1P01562 189 aa7.74□□□□□ -1.17
TPM3-210ENST00000368530 BCL2P10415 239 aa7.74□□□□□ -1.17
TPM3-210ENST00000368530 CTRB1P17538 263 aa7.74□□□□□ -1.17
TPM3-210ENST00000368530 ZNF90Q03938 601 aa7.74□□□□□ -1.17
TPM3-210ENST00000368530 EGFEM1PQ0D2K5 195 aa7.74□□□□□ -1.17
TPM3-210ENST00000368530 ASPHD1Q5U4P2 390 aa7.74□□□□□ -1.17
TPM3-210ENST00000368530 PVRIGQ6DKI7 326 aa7.74□□□□□ -1.17
TPM3-210ENST00000368530 CTRB2Q6GPI1 263 aa7.74□□□□□ -1.17
TPM3-210ENST00000368530 SREK1IP1Q8N9Q2 155 aaPredicted RBP7.74□□□□□ -1.17
TPM3-210ENST00000368530 SRSF8Q9BRL6 282 aaKnown RBP7.74□□□□□ -1.17
TPM3-210ENST00000368530 SEC11CQ9BY50 192 aa7.74□□□□□ -1.17
TPM3-210ENST00000368530 DOK5Q9P104 306 aa7.74□□□□□ -1.17
TPM3-210ENST00000368530 IGKV1D-37A0A075B6S9 117 aa7.73□□□□□ -1.17
TPM3-210ENST00000368530 CORTO00230 105 aa7.73□□□□□ -1.17
TPM3-210ENST00000368530 AMY1AP04745 511 aa7.73□□□□□ -1.17
TPM3-210ENST00000368530 CRYGCP07315 174 aa7.73□□□□□ -1.17
TPM3-210ENST00000368530 SRP19P09132 144 aaKnown RBP7.73□□□□□ -1.17
TPM3-210ENST00000368530 RHOBP62745 196 aa7.73□□□□□ -1.17
TPM3-210ENST00000368530 AKIRIN2Q53H80 203 aa7.73□□□□□ -1.17
TPM3-210ENST00000368530 C10orf91Q5T1B1 145 aa7.73□□□□□ -1.17
TPM3-210ENST00000368530 C10orf99Q6UWK7 81 aa7.73□□□□□ -1.17
TPM3-210ENST00000368530 MIR17HGQ75NE6 70 aa7.73□□□□□ -1.17
TPM3-210ENST00000368530 THAP8Q8NA92 274 aa7.73□□□□□ -1.17
TPM3-210ENST00000368530 OR5T1Q8NG75 326 aa7.73□□□□□ -1.17
TPM3-210ENST00000368530 SLC35B3Q9H1N7 401 aa7.73□□□□□ -1.17
TPM3-210ENST00000368530 CARHSP1Q9Y2V2 147 aaKnown RBP7.73□□□□□ -1.17
TPM3-210ENST00000368530 S4R3C0 116 aa7.73□□□□□ -1.17
TPM3-210ENST00000368530 TCRBV4S1A1TA0A5B7 111 aa7.73□□□□□ -1.17
TPM3-210ENST00000368530 I3L2K1 104 aa7.73□□□□□ -1.17
TPM3-210ENST00000368530 HLA-DRB1P01911 266 aa7.73□□□□□ -1.17
TPM3-210ENST00000368530 ARL14EPLP0DKL9 152 aa7.73□□□□□ -1.17
TPM3-210ENST00000368530 EGR2P11161 476 aaPredicted RBP7.73□□□□□ -1.17
TPM3-210ENST00000368530 ECSCRQ19T08 205 aa7.73□□□□□ -1.17
TPM3-210ENST00000368530 KHDC3LQ587J8 217 aa7.73□□□□□ -1.17
TPM3-210ENST00000368530 C9orf152Q5JTZ5 239 aa7.73□□□□□ -1.17
TPM3-210ENST00000368530 FAM78BQ5VT40 261 aa7.73□□□□□ -1.17
TPM3-210ENST00000368530 RBM14Q96PK6 669 aaKnown RBP7.73□□□□□ -1.17
TPM3-210ENST00000368530 SEPSECSQ9HD40 501 aaKnown RBP7.73□□□□□ -1.17
TPM3-210ENST00000368530 MOB4Q9Y3A3 225 aa7.73□□□□□ -1.17
TPM3-210ENST00000368530 LINC01548A6NM66 108 aa7.72□□□□□ -1.17
TPM3-210ENST00000368530 NPIPB5A8MRT5 1133 aa7.72□□□□□ -1.17
TPM3-210ENST00000368530 ATP6V0E1O15342 81 aa7.72□□□□□ -1.17
TPM3-210ENST00000368530 PAGE4O60829 102 aa7.72□□□□□ -1.17
TPM3-210ENST00000368530 HSPB1P04792 205 aaKnown RBP7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms