RNA–Protein interactions for RNA: ENST00000368019.5

USF1-201, Transcript of upstream transcription factor 1, humanhuman

TSL 5 BASIC

Gene USF1, Length 998 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-201ENST00000368019 LYZL6O75951 148 aa9.31□□□□□ -0.92
USF1-201ENST00000368019 TOMM40O96008 361 aa9.31□□□□□ -0.92
USF1-201ENST00000368019 LHBP01229 141 aa9.31□□□□□ -0.92
USF1-201ENST00000368019 CECR9P0C854 216 aa9.31□□□□□ -0.92
USF1-201ENST00000368019 CRYBB3P26998 211 aa9.31□□□□□ -0.92
USF1-201ENST00000368019 GATA4P43694 442 aa9.31□□□□□ -0.92
USF1-201ENST00000368019 ZNF83P51522 516 aa9.31□□□□□ -0.92
USF1-201ENST00000368019 HNRNPA3P51991 378 aaKnown RBP9.31□□□□□ -0.92
USF1-201ENST00000368019 KRTDAPP60985 99 aa9.31□□□□□ -0.92
USF1-201ENST00000368019 CD69Q07108 199 aa9.31□□□□□ -0.92
USF1-201ENST00000368019 C17orf58Q2M2W7 97 aa9.31□□□□□ -0.92
USF1-201ENST00000368019 RPL39P5Q59GN2 51 aa9.31□□□□□ -0.92
USF1-201ENST00000368019 ALKBH2Q6NS38 261 aa9.31□□□□□ -0.92
USF1-201ENST00000368019 BHLHA15Q7RTS1 189 aaPredicted RBP9.31□□□□□ -0.92
USF1-201ENST00000368019 BORCS7Q96B45 105 aa9.31□□□□□ -0.92
USF1-201ENST00000368019 SAP30LQ9HAJ7 183 aa9.31□□□□□ -0.92
USF1-201ENST00000368019 DUSP13Q9UII6 198 aa9.31□□□□□ -0.92
USF1-201ENST00000368019 OR51B2Q9Y5P1 312 aa9.31□□□□□ -0.92
USF1-201ENST00000368019 NBEAL1Q6ZS30 2694 aa9.31□□□□□ -0.92
USF1-201ENST00000368019 IGHV2OR16-5A0A0B4J2B6 119 aa9.3□□□□□ -0.92
USF1-201ENST00000368019 KBTBD11-OT1A0A1B0GTJ5 212 aa9.3□□□□□ -0.92
USF1-201ENST00000368019 PSMB11A5LHX3 300 aa9.3□□□□□ -0.92
USF1-201ENST00000368019 F2Z2F3 143 aa9.3□□□□□ -0.92
USF1-201ENST00000368019 J3QR06 171 aa9.3□□□□□ -0.92
USF1-201ENST00000368019 HYPMO75409 117 aa9.3□□□□□ -0.92
USF1-201ENST00000368019 FOXH1O75593 365 aa9.3□□□□□ -0.92
USF1-201ENST00000368019 APCSP02743 223 aa9.3□□□□□ -0.92
USF1-201ENST00000368019 NPSP0C0P6 89 aa9.3□□□□□ -0.92
USF1-201ENST00000368019 C3orf79P0CE67 100 aa9.3□□□□□ -0.92
USF1-201ENST00000368019 HNF1AP20823 631 aa9.3□□□□□ -0.92
USF1-201ENST00000368019 SRIP30626 198 aa9.3□□□□□ -0.92
USF1-201ENST00000368019 LINC00205P59089 165 aa9.3□□□□□ -0.92
USF1-201ENST00000368019 EDDM3AQ14507 147 aa9.3□□□□□ -0.92
USF1-201ENST00000368019 TDRG1Q3Y452 100 aa9.3□□□□□ -0.92
USF1-201ENST00000368019 TPRX1Q8N7U7 411 aa9.3□□□□□ -0.92
USF1-201ENST00000368019 OR1L4Q8NGR5 311 aa9.3□□□□□ -0.92
USF1-201ENST00000368019 OR4A5Q8NH83 315 aa9.3□□□□□ -0.92
USF1-201ENST00000368019 C18orf32Q8TCD1 76 aa9.3□□□□□ -0.92
USF1-201ENST00000368019 TSKUQ8WUA8 353 aa9.3□□□□□ -0.92
USF1-201ENST00000368019 SLC25A33Q9BSK2 321 aa9.3□□□□□ -0.92
USF1-201ENST00000368019 DCTN5Q9BTE1 182 aa9.3□□□□□ -0.92
USF1-201ENST00000368019 LAMTOR2Q9Y2Q5 125 aa9.3□□□□□ -0.92
USF1-201ENST00000368019 TANC2Q9HCD6 1990 aa9.3□□□□□ -0.92
USF1-201ENST00000368019 IGHV2-26A0A0B4J1V2 119 aa9.29□□□□□ -0.92
USF1-201ENST00000368019 A0A1W2PN81 502 aa9.29□□□□□ -0.92
USF1-201ENST00000368019 GGTLC3B5MD39 225 aa9.29□□□□□ -0.92
USF1-201ENST00000368019 IGHV3-13P01766 116 aa9.29□□□□□ -0.92
USF1-201ENST00000368019 SAA2P0DJI9 122 aaPredicted RBP9.29□□□□□ -0.92
USF1-201ENST00000368019 RNASE2P10153 161 aaKnown RBP9.29□□□□□ -0.92
USF1-201ENST00000368019 USF1P22415 310 aaPredicted RBP9.29□□□□□ -0.92
USF1-201ENST00000368019 ZNF134P52741 427 aa9.29□□□□□ -0.92
USF1-201ENST00000368019 KLF3P57682 345 aaPredicted RBP9.29□□□□□ -0.92
USF1-201ENST00000368019 RPS20P60866 119 aaKnown RBP9.29□□□□□ -0.92
USF1-201ENST00000368019 OR5I1Q13606 314 aa9.29□□□□□ -0.92
USF1-201ENST00000368019 CT83Q5H943 113 aa9.29□□□□□ -0.92
USF1-201ENST00000368019 CT45A1Q5HYN5 189 aa9.29□□□□□ -0.92
USF1-201ENST00000368019 TIMM23BQ5SRD1 257 aa9.29□□□□□ -0.92
USF1-201ENST00000368019 STUMQ69YW2 141 aa9.29□□□□□ -0.92
USF1-201ENST00000368019 C11orf71Q6IPW1 123 aa9.29□□□□□ -0.92
USF1-201ENST00000368019 FAM71F2Q6NXP2 309 aa9.29□□□□□ -0.92
USF1-201ENST00000368019 SSX8Q7RTT4 187 aa9.29□□□□□ -0.92
USF1-201ENST00000368019 CT45A3Q8NHU0 189 aa9.29□□□□□ -0.92
USF1-201ENST00000368019 OSR1Q8TAX0 266 aaPredicted RBP9.29□□□□□ -0.92
USF1-201ENST00000368019 YAE1D1Q9NRH1 226 aa9.29□□□□□ -0.92
USF1-201ENST00000368019 IGHV4-30-2A0A087WSY4 118 aa9.28□□□□□ -0.92
USF1-201ENST00000368019 TRAV9-2A0A087WT02 112 aa9.28□□□□□ -0.92
USF1-201ENST00000368019 OR7C2O60412 319 aa9.28□□□□□ -0.92
USF1-201ENST00000368019 REG1BP48304 166 aa9.28□□□□□ -0.92
USF1-201ENST00000368019 BPIFB3P59826 476 aa9.28□□□□□ -0.92
USF1-201ENST00000368019 VKORC1L1Q8N0U8 176 aa9.28□□□□□ -0.92
USF1-201ENST00000368019 C11orf42Q8N5U0 333 aa9.28□□□□□ -0.92
USF1-201ENST00000368019 STXBP6Q8NFX7 210 aa9.28□□□□□ -0.92
USF1-201ENST00000368019 OR8B3Q8NGG8 313 aa9.28□□□□□ -0.92
USF1-201ENST00000368019 FAM167A-AS1Q96KT0 104 aa9.28□□□□□ -0.92
USF1-201ENST00000368019 OR8B2Q96RD0 313 aa9.28□□□□□ -0.92
USF1-201ENST00000368019 TXN2Q99757 166 aa9.28□□□□□ -0.92
USF1-201ENST00000368019 RNF114Q9Y508 228 aa9.28□□□□□ -0.92
USF1-201ENST00000368019 DSCAML1Q8TD84 2053 aa9.28□□□□□ -0.92
USF1-201ENST00000368019 IGLV3-9A0A075B6K5 115 aa9.27□□□□□ -0.93
USF1-201ENST00000368019 IGHV1-18A0A0C4DH31 117 aa9.27□□□□□ -0.93
USF1-201ENST00000368019 IGHV1-69-2A0A0G2JMI3 117 aa9.27□□□□□ -0.93
USF1-201ENST00000368019 E7EQL1 145 aa9.27□□□□□ -0.93
USF1-201ENST00000368019 HIST1H1EP10412 219 aaKnown RBP9.27□□□□□ -0.93
USF1-201ENST00000368019 CD33P20138 364 aa9.27□□□□□ -0.93
USF1-201ENST00000368019 PMCHP20382 165 aa9.27□□□□□ -0.93
USF1-201ENST00000368019 GLRXP35754 106 aa9.27□□□□□ -0.93
USF1-201ENST00000368019 PAX2Q02962 417 aa9.27□□□□□ -0.93
USF1-201ENST00000368019 Q6ZN92 141 aa9.27□□□□□ -0.93
USF1-201ENST00000368019 SLC25A48Q6ZT89 311 aaKnown RBP9.27□□□□□ -0.93
USF1-201ENST00000368019 THAP8Q8NA92 274 aa9.27□□□□□ -0.93
USF1-201ENST00000368019 RCHY1Q96PM5 261 aa9.27□□□□□ -0.93
USF1-201ENST00000368019 RNASE7Q9H1E1 156 aaKnown RBP9.27□□□□□ -0.93
USF1-201ENST00000368019 DNAJC4Q9NNZ3 241 aa9.27□□□□□ -0.93
USF1-201ENST00000368019 ZNF492Q9P255 531 aa9.27□□□□□ -0.93
USF1-201ENST00000368019 SLC25A15Q9Y619 301 aa9.27□□□□□ -0.93
USF1-201ENST00000368019 IGHV3-64DA0A0J9YX35 117 aa9.26□□□□□ -0.93
USF1-201ENST00000368019 TEX50A0A1B0GTY4 177 aa9.26□□□□□ -0.93
USF1-201ENST00000368019 A0A1B0GXF2 115 aa9.26□□□□□ -0.93
USF1-201ENST00000368019 FAM231BA6NCW3 169 aa9.26□□□□□ -0.93
USF1-201ENST00000368019 CRXO43186 299 aaPredicted RBP9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms