RNA–Protein interactions for RNA: ENST00000365559.1

RNU4-48P-201, Transcript of RNA, U4 small nuclear 48, pseudogene, humanhuman

BASIC

Gene RNU4-48P, Length 182 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-48P-201ENST00000365559 TEX47Q8TBZ9 253 aa0.26□□□□□ -2.37
RNU4-48P-201ENST00000365559 FAM172AQ8WUF8 416 aa0.26□□□□□ -2.37
RNU4-48P-201ENST00000365559 C4orf3Q8WVX3 66 aa0.26□□□□□ -2.37
RNU4-48P-201ENST00000365559 BORCS5Q969J3 196 aa0.26□□□□□ -2.37
RNU4-48P-201ENST00000365559 BORCS7Q96B45 105 aa0.26□□□□□ -2.37
RNU4-48P-201ENST00000365559 PPP1R14BQ96C90 147 aa0.26□□□□□ -2.37
RNU4-48P-201ENST00000365559 C2orf50Q96LR7 162 aa0.26□□□□□ -2.37
RNU4-48P-201ENST00000365559 HIST1H2BLQ99880 126 aa0.26□□□□□ -2.37
RNU4-48P-201ENST00000365559 TRIM4Q9C037 500 aa0.26□□□□□ -2.37
RNU4-48P-201ENST00000365559 C20orf27Q9GZN8 174 aa0.26□□□□□ -2.37
RNU4-48P-201ENST00000365559 PARVGQ9HBI0 331 aa0.26□□□□□ -2.37
RNU4-48P-201ENST00000365559 CTNNBIP1Q9NSA3 81 aaPredicted RBP0.26□□□□□ -2.37
RNU4-48P-201ENST00000365559 C14orf105Q9NVL8 296 aa0.26□□□□□ -2.37
RNU4-48P-201ENST00000365559 EPDR1Q9UM22 224 aa0.26□□□□□ -2.37
RNU4-48P-201ENST00000365559 HS3ST2Q9Y278 367 aa0.26□□□□□ -2.37
RNU4-48P-201ENST00000365559 UTP11Q9Y3A2 253 aaKnown RBP0.26□□□□□ -2.37
RNU4-48P-201ENST00000365559 PRELID3BQ9Y3B1 194 aa0.26□□□□□ -2.37
RNU4-48P-201ENST00000365559 U3KQ87 197 aa0.26□□□□□ -2.37
RNU4-48P-201ENST00000365559 V9GYY5 206 aaPredicted RBP0.26□□□□□ -2.37
RNU4-48P-201ENST00000365559 MYO3BQ8WXR4 1341 aa0.26□□□□□ -2.37
RNU4-48P-201ENST00000365559 ADCY9O60503 1353 aa0.26□□□□□ -2.37
RNU4-48P-201ENST00000365559 ADGRB2O60241 1585 aa0.26□□□□□ -2.37
RNU4-48P-201ENST00000365559 BCORL1Q5H9F3 1711 aa0.26□□□□□ -2.37
RNU4-48P-201ENST00000365559 ANKRD31Q8N7Z5 1873 aa0.26□□□□□ -2.37
RNU4-48P-201ENST00000365559 MED12Q93074 2177 aa0.26□□□□□ -2.37
RNU4-48P-201ENST00000365559 ASH1LQ9NR48 2969 aaKnown RBP0.25□□□□□ -2.37
RNU4-48P-201ENST00000365559 NAV2Q8IVL1 2488 aa0.25□□□□□ -2.37
RNU4-48P-201ENST00000365559 FREM3P0C091 2139 aa0.25□□□□□ -2.37
RNU4-48P-201ENST00000365559 ATG2AQ2TAZ0 1938 aa0.25□□□□□ -2.37
RNU4-48P-201ENST00000365559 MGAMO43451 1857 aa0.25□□□□□ -2.37
RNU4-48P-201ENST00000365559 CAMSAP1Q5T5Y3 1602 aa0.25□□□□□ -2.37
RNU4-48P-201ENST00000365559 PLB1Q6P1J6 1458 aa0.25□□□□□ -2.37
RNU4-48P-201ENST00000365559 CCDC144AA2RUR9 1427 aa0.25□□□□□ -2.37
RNU4-48P-201ENST00000365559 J3QRK9 145 aa0.25□□□□□ -2.37
RNU4-48P-201ENST00000365559 M0R2N4 97 aa0.25□□□□□ -2.37
RNU4-48P-201ENST00000365559 NCR3O14931 201 aa0.25□□□□□ -2.37
RNU4-48P-201ENST00000365559 INE1O15225 51 aa0.25□□□□□ -2.37
RNU4-48P-201ENST00000365559 CYB5BO43169 146 aa0.25□□□□□ -2.37
RNU4-48P-201ENST00000365559 PDE6DO43924 150 aa0.25□□□□□ -2.37
RNU4-48P-201ENST00000365559 GADD45GO95257 159 aa0.25□□□□□ -2.37
RNU4-48P-201ENST00000365559 ZNF682O95780 498 aa0.25□□□□□ -2.37
RNU4-48P-201ENST00000365559 TCRBP04435 133 aa0.25□□□□□ -2.37
RNU4-48P-201ENST00000365559 SERPINE1P05121 402 aa0.25□□□□□ -2.37
RNU4-48P-201ENST00000365559 C8GP07360 202 aa0.25□□□□□ -2.37
RNU4-48P-201ENST00000365559 ZNF25P17030 456 aaPredicted RBP0.25□□□□□ -2.37
RNU4-48P-201ENST00000365559 AP3S2P59780 193 aa0.25□□□□□ -2.37
RNU4-48P-201ENST00000365559 LSM6P62312 80 aaKnown RBP0.25□□□□□ -2.37
RNU4-48P-201ENST00000365559 CNBPP62633 177 aaKnown RBP0.25□□□□□ -2.37
RNU4-48P-201ENST00000365559 EDDM3AQ14507 147 aa0.25□□□□□ -2.37
RNU4-48P-201ENST00000365559 MPV17LQ2QL34 196 aa0.25□□□□□ -2.37
RNU4-48P-201ENST00000365559 IAH1Q2TAA2 248 aaPredicted RBP0.25□□□□□ -2.37
RNU4-48P-201ENST00000365559 SPRNQ5BIV9 151 aa0.25□□□□□ -2.37
RNU4-48P-201ENST00000365559 FAM74A1Q5RGS3 127 aa0.25□□□□□ -2.37
RNU4-48P-201ENST00000365559 LYRM7Q5U5X0 104 aa0.25□□□□□ -2.37
RNU4-48P-201ENST00000365559 SOSTDC1Q6X4U4 206 aa0.25□□□□□ -2.37
RNU4-48P-201ENST00000365559 LCA10Q71F78 164 aa0.25□□□□□ -2.37
RNU4-48P-201ENST00000365559 SLC30A7Q8NEW0 376 aa0.25□□□□□ -2.37
RNU4-48P-201ENST00000365559 OR8J2Q8NGG1 315 aa0.25□□□□□ -2.37
RNU4-48P-201ENST00000365559 OR8D4Q8NGM9 314 aa0.25□□□□□ -2.37
RNU4-48P-201ENST00000365559 TMEM254Q8TBM7 123 aa0.25□□□□□ -2.37
RNU4-48P-201ENST00000365559 SLC25A40Q8TBP6 338 aa0.25□□□□□ -2.37
RNU4-48P-201ENST00000365559 WFDC5Q8TCV5 224 aa0.25□□□□□ -2.37
RNU4-48P-201ENST00000365559 ITFG2Q969R8 447 aa0.25□□□□□ -2.37
RNU4-48P-201ENST00000365559 SLAMF6Q96DU3 332 aa0.25□□□□□ -2.37
RNU4-48P-201ENST00000365559 AMELYQ99218 206 aa0.25□□□□□ -2.37
RNU4-48P-201ENST00000365559 RNASE7Q9H1E1 156 aaKnown RBP0.25□□□□□ -2.37
RNU4-48P-201ENST00000365559 BCL2L10Q9HD36 194 aa0.25□□□□□ -2.37
RNU4-48P-201ENST00000365559 C14orf132Q9NPU4 83 aa0.25□□□□□ -2.37
RNU4-48P-201ENST00000365559 UBAP1Q9NZ09 502 aa0.25□□□□□ -2.37
RNU4-48P-201ENST00000365559 GLTPQ9NZD2 209 aa0.25□□□□□ -2.37
RNU4-48P-201ENST00000365559 FBXO5Q9UKT4 447 aa0.25□□□□□ -2.37
RNU4-48P-201ENST00000365559 MDN1Q9NU22 5596 aa0.25□□□□□ -2.37
RNU4-48P-201ENST00000365559 FRAS1Q86XX4 4008 aa0.24□□□□□ -2.37
RNU4-48P-201ENST00000365559 PIK3C2AO00443 1686 aa0.24□□□□□ -2.37
RNU4-48P-201ENST00000365559 ARHGEF11O15085 1522 aa0.24□□□□□ -2.37
RNU4-48P-201ENST00000365559 A0A087WUJ7 227 aa0.24□□□□□ -2.37
RNU4-48P-201ENST00000365559 TMEM114B3SHH9 223 aa0.24□□□□□ -2.37
RNU4-48P-201ENST00000365559 TIMM17BO60830 172 aa0.24□□□□□ -2.37
RNU4-48P-201ENST00000365559 SRP14P37108 136 aaKnown RBP0.24□□□□□ -2.37
RNU4-48P-201ENST00000365559 CDKN2CP42773 168 aa0.24□□□□□ -2.37
RNU4-48P-201ENST00000365559 RANP62826 216 aaKnown RBP0.24□□□□□ -2.37
RNU4-48P-201ENST00000365559 DYNLT1P63172 113 aa0.24□□□□□ -2.37
RNU4-48P-201ENST00000365559 EIF5AP63241 154 aaKnown RBP0.24□□□□□ -2.37
RNU4-48P-201ENST00000365559 HIST1H3AP68431 136 aa0.24□□□□□ -2.37
RNU4-48P-201ENST00000365559 H3F3AP84243 136 aa0.24□□□□□ -2.37
RNU4-48P-201ENST00000365559 SRSF6Q13247 344 aaKnown RBP0.24□□□□□ -2.37
RNU4-48P-201ENST00000365559 SPA17Q15506 151 aa0.24□□□□□ -2.37
RNU4-48P-201ENST00000365559 TMEM97Q5BJF2 176 aa0.24□□□□□ -2.37
RNU4-48P-201ENST00000365559 Q6Q795 121 aa0.24□□□□□ -2.37
RNU4-48P-201ENST00000365559 C12orf45Q8N5I9 185 aaPredicted RBP0.24□□□□□ -2.37
RNU4-48P-201ENST00000365559 ST6GALNAC3Q8NDV1 305 aa0.24□□□□□ -2.37
RNU4-48P-201ENST00000365559 OR52L1Q8NGH7 329 aa0.24□□□□□ -2.37
RNU4-48P-201ENST00000365559 PATE1Q8WXA2 126 aa0.24□□□□□ -2.37
RNU4-48P-201ENST00000365559 ADAT3Q96EY9 351 aaPredicted RBP0.24□□□□□ -2.37
RNU4-48P-201ENST00000365559 SIGMAR1Q99720 223 aa0.24□□□□□ -2.37
RNU4-48P-201ENST00000365559 PRADC1Q9BSG0 188 aa0.24□□□□□ -2.37
RNU4-48P-201ENST00000365559 KIFC1Q9BW19 673 aa0.24□□□□□ -2.37
RNU4-48P-201ENST00000365559 UQCC1Q9NVA1 299 aa0.24□□□□□ -2.37
RNU4-48P-201ENST00000365559 TAS2R7Q9NYW3 318 aa0.24□□□□□ -2.37
RNU4-48P-201ENST00000365559 TVP23BQ9NYZ1 205 aa0.24□□□□□ -2.37
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms