RNA–Protein interactions for RNA: ENST00000358894.10

COL20A1-201, Transcript of collagen type XX alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL20A1, Length 4,172 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-201ENST00000358894 TMEM238C9JI98 176 aa10.04□□□□□ -0.8
COL20A1-201ENST00000358894 AMY1AP04745 511 aa10.04□□□□□ -0.8
COL20A1-201ENST00000358894 SIGMAR1Q99720 223 aa10.04□□□□□ -0.8
COL20A1-201ENST00000358894 FOXA2Q9Y261 457 aaPredicted RBP10.04□□□□□ -0.8
COL20A1-201ENST00000358894 H3BVH4 76 aa10.04□□□□□ -0.8
COL20A1-201ENST00000358894 ATP5IP56385 69 aaPredicted RBP10.04□□□□□ -0.8
COL20A1-201ENST00000358894 ECSCRQ19T08 205 aa10.04□□□□□ -0.8
COL20A1-201ENST00000358894 GOLT1AQ6ZVE7 132 aa10.04□□□□□ -0.8
COL20A1-201ENST00000358894 CACNG8Q8WXS5 425 aa10.04□□□□□ -0.8
COL20A1-201ENST00000358894 C15orf65H3BRN8 121 aa10.04□□□□□ -0.8
COL20A1-201ENST00000358894 PEX7O00628 323 aa10.04□□□□□ -0.8
COL20A1-201ENST00000358894 PFN1P07737 140 aaKnown RBP10.04□□□□□ -0.8
COL20A1-201ENST00000358894 APOBEC3AP31941 199 aaPredicted RBP10.04□□□□□ -0.8
COL20A1-201ENST00000358894 FCGR2BP31994 310 aaPredicted RBP10.04□□□□□ -0.8
COL20A1-201ENST00000358894 MPV17L2Q567V2 206 aa10.04□□□□□ -0.8
COL20A1-201ENST00000358894 CEP295Q9C0D2 2601 aa10.03□□□□□ -0.8
COL20A1-201ENST00000358894 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP10.03□□□□□ -0.8
COL20A1-201ENST00000358894 F2RL2O00254 374 aa10.03□□□□□ -0.8
COL20A1-201ENST00000358894 CCL25O15444 150 aa10.03□□□□□ -0.8
COL20A1-201ENST00000358894 HLA-DRB1P01911 266 aa10.03□□□□□ -0.8
COL20A1-201ENST00000358894 Q1RN00 199 aa10.03□□□□□ -0.8
COL20A1-201ENST00000358894 RNASE6Q93091 150 aaKnown RBP10.03□□□□□ -0.8
COL20A1-201ENST00000358894 TRAV9-2A0A087WT02 112 aa10.03□□□□□ -0.8
COL20A1-201ENST00000358894 DPF1Q92782 380 aa10.03□□□□□ -0.8
COL20A1-201ENST00000358894 SLC25A33Q9BSK2 321 aa10.03□□□□□ -0.8
COL20A1-201ENST00000358894 MCRIP2Q9BUT9 160 aaKnown RBP10.03□□□□□ -0.8
COL20A1-201ENST00000358894 SCNM1Q9BWG6 230 aa10.03□□□□□ -0.8
COL20A1-201ENST00000358894 UBTD1Q9HAC8 227 aa10.03□□□□□ -0.8
COL20A1-201ENST00000358894 SPCS1Q9Y6A9 102 aa10.03□□□□□ -0.8
COL20A1-201ENST00000358894 B9A039 149 aa10.03□□□□□ -0.8
COL20A1-201ENST00000358894 MMP23AO75900 390 aa10.03□□□□□ -0.8
COL20A1-201ENST00000358894 TSPOP30536 169 aa10.03□□□□□ -0.8
COL20A1-201ENST00000358894 ACTL10Q5JWF8 245 aa10.03□□□□□ -0.8
COL20A1-201ENST00000358894 TMEM200BQ69YZ2 307 aa10.03□□□□□ -0.8
COL20A1-201ENST00000358894 ZNF788Q6ZQV5 615 aa10.03□□□□□ -0.8
COL20A1-201ENST00000358894 Q6ZS92 163 aa10.03□□□□□ -0.8
COL20A1-201ENST00000358894 ZNF324O75467 553 aaPredicted RBP10.02□□□□□ -0.8
COL20A1-201ENST00000358894 TMEM97Q5BJF2 176 aa10.02□□□□□ -0.8
COL20A1-201ENST00000358894 PRSS47A8MTI9 375 aa10.02□□□□□ -0.81
COL20A1-201ENST00000358894 CA7P43166 264 aa10.02□□□□□ -0.81
COL20A1-201ENST00000358894 SPRNQ5BIV9 151 aa10.02□□□□□ -0.81
COL20A1-201ENST00000358894 A0A0G2JNJ9 132 aa10.02□□□□□ -0.81
COL20A1-201ENST00000358894 MTURNQ8N3F0 131 aa10.02□□□□□ -0.81
COL20A1-201ENST00000358894 TMEM116Q8NCL8 245 aa10.02□□□□□ -0.81
COL20A1-201ENST00000358894 Q9UFV3 132 aa10.02□□□□□ -0.81
COL20A1-201ENST00000358894 PLXNB1O43157 2135 aa10.02□□□□□ -0.81
COL20A1-201ENST00000358894 IGF2RP11717 2491 aa10.02□□□□□ -0.81
COL20A1-201ENST00000358894 IGHV3OR16-8A0A075B7F1 116 aa10.01□□□□□ -0.81
COL20A1-201ENST00000358894 IL4P05112 153 aa10.01□□□□□ -0.81
COL20A1-201ENST00000358894 C5orf17Q8NAS9 161 aa10.01□□□□□ -0.81
COL20A1-201ENST00000358894 COL25A1Q9BXS0 654 aaPredicted RBP10.01□□□□□ -0.81
COL20A1-201ENST00000358894 LOC107984156A0A0G2JMH3 177 aa10.01□□□□□ -0.81
COL20A1-201ENST00000358894 C7orf71A4D174 169 aa10.01□□□□□ -0.81
COL20A1-201ENST00000358894 IGLV1-44P01699 117 aa10.01□□□□□ -0.81
COL20A1-201ENST00000358894 IGLV2-14P01704 120 aa10.01□□□□□ -0.81
COL20A1-201ENST00000358894 DLX1P56177 255 aa10.01□□□□□ -0.81
COL20A1-201ENST00000358894 ADIPOQQ15848 244 aa10.01□□□□□ -0.81
COL20A1-201ENST00000358894 LYPD2Q6UXB3 125 aa10.01□□□□□ -0.81
COL20A1-201ENST00000358894 WFDC3Q8IUB2 231 aa10.01□□□□□ -0.81
COL20A1-201ENST00000358894 ARL17AQ8IVW1 177 aa10.01□□□□□ -0.81
COL20A1-201ENST00000358894 ZNF114Q8NC26 417 aa10.01□□□□□ -0.81
COL20A1-201ENST00000358894 NEUROG1Q92886 237 aa10.01□□□□□ -0.81
COL20A1-201ENST00000358894 DNAH14Q0VDD8 3507 aa10.01□□□□□ -0.81
COL20A1-201ENST00000358894 ORM1P02763 201 aa10.01□□□□□ -0.81
COL20A1-201ENST00000358894 ANKRD39Q53RE8 183 aa10.01□□□□□ -0.81
COL20A1-201ENST00000358894 KIR3DL3Q8N743 410 aa10.01□□□□□ -0.81
COL20A1-201ENST00000358894 SRSF12Q8WXF0 261 aaKnown RBP10.01□□□□□ -0.81
COL20A1-201ENST00000358894 ZNF257Q9Y2Q1 563 aa10.01□□□□□ -0.81
COL20A1-201ENST00000358894 CACNA1AO00555 2505 aa10□□□□□ -0.81
COL20A1-201ENST00000358894 IGKV3-7A0A075B6H7 116 aa10□□□□□ -0.81
COL20A1-201ENST00000358894 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10□□□□□ -0.81
COL20A1-201ENST00000358894 TRBV9A0A0B4J1U6 114 aa10□□□□□ -0.81
COL20A1-201ENST00000358894 LIPFP07098 398 aa10□□□□□ -0.81
COL20A1-201ENST00000358894 C3orf79P0CE67 100 aa10□□□□□ -0.81
COL20A1-201ENST00000358894 VDAC2P45880 294 aaPredicted RBP10□□□□□ -0.81
COL20A1-201ENST00000358894 TMEM133Q9H2Q1 129 aa10□□□□□ -0.81
COL20A1-201ENST00000358894 J3KRW8 73 aa10□□□□□ -0.81
COL20A1-201ENST00000358894 TBR1Q16650 682 aa10□□□□□ -0.81
COL20A1-201ENST00000358894 SCGB1D4Q6XE38 83 aa10□□□□□ -0.81
COL20A1-201ENST00000358894 OR2K2Q8NGT1 345 aa10□□□□□ -0.81
COL20A1-201ENST00000358894 LINC00479Q96M42 142 aa10□□□□□ -0.81
COL20A1-201ENST00000358894 FAM215AQ9Y5M1 114 aa10□□□□□ -0.81
COL20A1-201ENST00000358894 PTPRQQ9UMZ3 2332 aa10□□□□□ -0.81
COL20A1-201ENST00000358894 A0A1W2PRE2 83 aa10□□□□□ -0.81
COL20A1-201ENST00000358894 RIGQ13278 110 aa10□□□□□ -0.81
COL20A1-201ENST00000358894 C17orf58Q2M2W7 97 aa10□□□□□ -0.81
COL20A1-201ENST00000358894 SLC25A48Q6ZT89 311 aaKnown RBP10□□□□□ -0.81
COL20A1-201ENST00000358894 C11orf1Q9H5F2 150 aa10□□□□□ -0.81
COL20A1-201ENST00000358894 HIGD1CA8MV81 97 aa10□□□□□ -0.81
COL20A1-201ENST00000358894 TMEM178BH3BS89 294 aa10□□□□□ -0.81
COL20A1-201ENST00000358894 IGHV3-23P01764 117 aa10□□□□□ -0.81
COL20A1-201ENST00000358894 FOXL1Q12952 345 aa10□□□□□ -0.81
COL20A1-201ENST00000358894 SFTA2Q6UW10 78 aa10□□□□□ -0.81
COL20A1-201ENST00000358894 ODF3L1Q8IXM7 274 aa10□□□□□ -0.81
COL20A1-201ENST00000358894 JKAMPQ9P055 326 aa10□□□□□ -0.81
COL20A1-201ENST00000358894 SZT2Q5T011 3432 aa9.99□□□□□ -0.81
COL20A1-201ENST00000358894 TDRG1Q3Y452 100 aa9.99□□□□□ -0.81
COL20A1-201ENST00000358894 C2orf83Q53S99 150 aa9.99□□□□□ -0.81
COL20A1-201ENST00000358894 OR4A5Q8NH83 315 aa9.99□□□□□ -0.81
COL20A1-201ENST00000358894 FAM208BQ5VWN6 2430 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms