RNA–Protein interactions for RNA: ENST00000357811.7

COL13A1-202, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,991 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-202ENST00000357811 SPTAN1Q13813 2472 aaKnown RBP16.44■□□□□ 0.22
COL13A1-202ENST00000357811 TCRBV4S1A1TA0A5B7 111 aa16.44■□□□□ 0.22
COL13A1-202ENST00000357811 DIRC3C9JPN6 131 aa16.44■□□□□ 0.22
COL13A1-202ENST00000357811 APCSP02743 223 aa16.44■□□□□ 0.22
COL13A1-202ENST00000357811 SLC25A5P05141 298 aaKnown RBP16.44■□□□□ 0.22
COL13A1-202ENST00000357811 C11orf42Q8N5U0 333 aa16.44■□□□□ 0.22
COL13A1-202ENST00000357811 PRSS33Q8NF86 280 aa16.44■□□□□ 0.22
COL13A1-202ENST00000357811 NUDT10Q8NFP7 164 aa16.44■□□□□ 0.22
COL13A1-202ENST00000357811 NUDT11Q96G61 164 aa16.44■□□□□ 0.22
COL13A1-202ENST00000357811 CHODLQ9H9P2 273 aa16.44■□□□□ 0.22
COL13A1-202ENST00000357811 PGPA6NDG6 321 aa16.43■□□□□ 0.22
COL13A1-202ENST00000357811 FAM87AP0C7U9 286 aa16.43■□□□□ 0.22
COL13A1-202ENST00000357811 C3orf36Q3SXR2 165 aa16.43■□□□□ 0.22
COL13A1-202ENST00000357811 ZNF841Q6ZN19 808 aa16.43■□□□□ 0.22
COL13A1-202ENST00000357811 RNASE6Q93091 150 aaKnown RBP16.43■□□□□ 0.22
COL13A1-202ENST00000357811 TRAV9-1A0A075B6T8 112 aa16.43■□□□□ 0.22
COL13A1-202ENST00000357811 AMY1AP04745 511 aa16.43■□□□□ 0.22
COL13A1-202ENST00000357811 COMPP49747 757 aaPredicted RBP16.43■□□□□ 0.22
COL13A1-202ENST00000357811 FXYD5Q96DB9 178 aa16.43■□□□□ 0.22
COL13A1-202ENST00000357811 COTL1Q14019 142 aa16.42■□□□□ 0.22
COL13A1-202ENST00000357811 GDF5OSQ5U4N7 250 aa16.42■□□□□ 0.22
COL13A1-202ENST00000357811 Q0VG73 95 aa16.42■□□□□ 0.22
COL13A1-202ENST00000357811 LCN12Q6JVE5 192 aa16.42■□□□□ 0.22
COL13A1-202ENST00000357811 Q71RC1 249 aaPredicted RBP16.42■□□□□ 0.22
COL13A1-202ENST00000357811 ZNF586Q9NXT0 402 aa16.42■□□□□ 0.22
COL13A1-202ENST00000357811 SMIM27A0A1W2PRY6 76 aa16.41■□□□□ 0.22
COL13A1-202ENST00000357811 VMA21Q3ZAQ7 101 aa16.41■□□□□ 0.22
COL13A1-202ENST00000357811 TCF24Q7RTU0 167 aa16.41■□□□□ 0.22
COL13A1-202ENST00000357811 PDPNQ86YL7 162 aa16.41■□□□□ 0.22
COL13A1-202ENST00000357811 KIR3DL3Q8N743 410 aa16.41■□□□□ 0.22
COL13A1-202ENST00000357811 VSTM2AQ8TAG5 236 aa16.41■□□□□ 0.22
COL13A1-202ENST00000357811 ST6GALNAC6Q969X2 333 aa16.41■□□□□ 0.22
COL13A1-202ENST00000357811 C19orf24Q9BVV8 132 aa16.41■□□□□ 0.22
COL13A1-202ENST00000357811 MRPL32Q9BYC8 188 aaKnown RBP16.41■□□□□ 0.22
COL13A1-202ENST00000357811 E7EQL1 145 aa16.41■□□□□ 0.22
COL13A1-202ENST00000357811 SUB1P53999 127 aaKnown RBP eCLIP16.41■□□□□ 0.22
COL13A1-202ENST00000357811 BPIFB3P59826 476 aa16.41■□□□□ 0.22
COL13A1-202ENST00000357811 WDR73Q6P4I2 378 aa16.41■□□□□ 0.22
COL13A1-202ENST00000357811 NUP35Q8NFH5 326 aa16.41■□□□□ 0.22
COL13A1-202ENST00000357811 TMEM186Q96B77 213 aa16.41■□□□□ 0.22
COL13A1-202ENST00000357811 IGHV1-8P0DP01 117 aa16.41■□□□□ 0.22
COL13A1-202ENST00000357811 UBE2G1P62253 170 aa16.41■□□□□ 0.22
COL13A1-202ENST00000357811 MAJINQ3KP22 176 aa16.41■□□□□ 0.22
COL13A1-202ENST00000357811 ETFRF1Q6IPR1 90 aa16.41■□□□□ 0.22
COL13A1-202ENST00000357811 HIGD1CA8MV81 97 aa16.4■□□□□ 0.22
COL13A1-202ENST00000357811 LY6HO94772 140 aa16.4■□□□□ 0.22
COL13A1-202ENST00000357811 TMEM183BQ1AE95 376 aa16.4■□□□□ 0.22
COL13A1-202ENST00000357811 TEX43Q6ZNM6 134 aa16.4■□□□□ 0.22
COL13A1-202ENST00000357811 OR2D3Q8NGH3 330 aa16.4■□□□□ 0.22
COL13A1-202ENST00000357811 MIEN1Q9BRT3 115 aa16.4■□□□□ 0.22
COL13A1-202ENST00000357811 TRAV8-1A0A0A6YYK1 113 aa16.4■□□□□ 0.22
COL13A1-202ENST00000357811 M0QZ24 198 aa16.4■□□□□ 0.22
COL13A1-202ENST00000357811 OR1L4Q8NGR5 311 aa16.4■□□□□ 0.22
COL13A1-202ENST00000357811 ARL2-SNX15V9GYD0 113 aa16.4■□□□□ 0.22
COL13A1-202ENST00000357811 RPL19P84098 196 aaKnown RBP16.39■□□□□ 0.21
COL13A1-202ENST00000357811 MRGPRG-AS1Q2M3A8 158 aa16.39■□□□□ 0.21
COL13A1-202ENST00000357811 LINC00322Q6ZN03 302 aaPredicted RBP16.39■□□□□ 0.21
COL13A1-202ENST00000357811 KCNS1Q96KK3 526 aa16.39■□□□□ 0.21
COL13A1-202ENST00000357811 S4R3C0 116 aa16.39■□□□□ 0.21
COL13A1-202ENST00000357811 IGLC7A0M8Q6 106 aa16.39■□□□□ 0.21
COL13A1-202ENST00000357811 IZUMO1RA6ND01 250 aa16.39■□□□□ 0.21
COL13A1-202ENST00000357811 VWC2LB2RUY7 222 aa16.39■□□□□ 0.21
COL13A1-202ENST00000357811 ZNF835Q9Y2P0 537 aa16.39■□□□□ 0.21
COL13A1-202ENST00000357811 COL12A1Q99715 3063 aa16.39■□□□□ 0.21
COL13A1-202ENST00000357811 TRBV9A0A0B4J1U6 114 aa16.38■□□□□ 0.21
COL13A1-202ENST00000357811 MT-ND6P03923 174 aa16.38■□□□□ 0.21
COL13A1-202ENST00000357811 Q8NA96 180 aa16.38■□□□□ 0.21
COL13A1-202ENST00000357811 RNASE8Q8TDE3 154 aaKnown RBP16.38■□□□□ 0.21
COL13A1-202ENST00000357811 FBXL15Q9H469 300 aa16.38■□□□□ 0.21
COL13A1-202ENST00000357811 ESDP10768 282 aa16.38■□□□□ 0.21
COL13A1-202ENST00000357811 FOXA3P55318 350 aaPredicted RBP16.38■□□□□ 0.21
COL13A1-202ENST00000357811 TBR1Q16650 682 aa16.38■□□□□ 0.21
COL13A1-202ENST00000357811 PNKDQ8N490 385 aa16.38■□□□□ 0.21
COL13A1-202ENST00000357811 TSKUQ8WUA8 353 aa16.38■□□□□ 0.21
COL13A1-202ENST00000357811 MAP1AP78559 2803 aaPredicted RBP16.38■□□□□ 0.21
COL13A1-202ENST00000357811 ZNF324O75467 553 aaPredicted RBP16.38■□□□□ 0.21
COL13A1-202ENST00000357811 FSTL3O95633 263 aa16.38■□□□□ 0.21
COL13A1-202ENST00000357811 HLA-DQA1P01909 254 aa16.38■□□□□ 0.21
COL13A1-202ENST00000357811 PMCHL1Q16048 86 aa16.38■□□□□ 0.21
COL13A1-202ENST00000357811 C3orf79P0CE67 100 aa16.37■□□□□ 0.21
COL13A1-202ENST00000357811 LYZP61626 148 aa16.37■□□□□ 0.21
COL13A1-202ENST00000357811 TMEM155Q4W5P6 130 aa16.37■□□□□ 0.21
COL13A1-202ENST00000357811 SPACA3Q8IXA5 215 aa16.37■□□□□ 0.21
COL13A1-202ENST00000357811 LINC01560Q8TB33 94 aa16.37■□□□□ 0.21
COL13A1-202ENST00000357811 IGHV1-69-2A0A0G2JMI3 117 aa16.37■□□□□ 0.21
COL13A1-202ENST00000357811 A0A1W2PRD5 423 aa16.37■□□□□ 0.21
COL13A1-202ENST00000357811 A0A1W2PRF3 423 aa16.37■□□□□ 0.21
COL13A1-202ENST00000357811 A0A1W2PRM7 423 aa16.37■□□□□ 0.21
COL13A1-202ENST00000357811 NBEAP1P0C6P0 100 aa16.37■□□□□ 0.21
COL13A1-202ENST00000357811 RPL27AP46776 148 aaKnown RBP16.37■□□□□ 0.21
COL13A1-202ENST00000357811 ZNF137PP52743 207 aa16.37■□□□□ 0.21
COL13A1-202ENST00000357811 TMEM30BQ3MIR4 351 aa16.37■□□□□ 0.21
COL13A1-202ENST00000357811 RNASEKQ6P5S7 137 aaKnown RBP16.37■□□□□ 0.21
COL13A1-202ENST00000357811 Q8N976 141 aa16.37■□□□□ 0.21
COL13A1-202ENST00000357811 C18orf32Q8TCD1 76 aa16.37■□□□□ 0.21
COL13A1-202ENST00000357811 RALYQ9UKM9 306 aaKnown RBP16.37■□□□□ 0.21
COL13A1-202ENST00000357811 INSIG2Q9Y5U4 225 aa16.37■□□□□ 0.21
COL13A1-202ENST00000357811 SH2D7A6NKC9 451 aaPredicted RBP16.36■□□□□ 0.21
COL13A1-202ENST00000357811 ATP5IP56385 69 aaPredicted RBP16.36■□□□□ 0.21
COL13A1-202ENST00000357811 MMDQ15546 238 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 133.3 ms