RNA–Protein interactions for RNA: ENST00000357475.8

SSBP3-202, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 1 (best) BASIC

Gene SSBP3, Length 1,533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-202ENST00000357475 YIF1AO95070 293 aa19.4■□□□□ 0.7
SSBP3-202ENST00000357475 RD3LP0DJH9 198 aa19.4■□□□□ 0.7
SSBP3-202ENST00000357475 CAMLGP49069 296 aa19.4■□□□□ 0.7
SSBP3-202ENST00000357475 RELQ04864 619 aaPredicted RBP19.4■□□□□ 0.7
SSBP3-202ENST00000357475 GPHB5Q86YW7 130 aa19.4■□□□□ 0.7
SSBP3-202ENST00000357475 OR4F17Q8NGA8 305 aa19.4■□□□□ 0.7
SSBP3-202ENST00000357475 OR4F4Q96R69 305 aa19.4■□□□□ 0.7
SSBP3-202ENST00000357475 BOLA1Q9Y3E2 137 aa19.4■□□□□ 0.7
SSBP3-202ENST00000357475 ZNF207O43670 478 aaKnown RBP19.39■□□□□ 0.69
SSBP3-202ENST00000357475 IFNA5P01569 189 aa19.39■□□□□ 0.69
SSBP3-202ENST00000357475 MIC13Q5XKP0 118 aa19.39■□□□□ 0.69
SSBP3-202ENST00000357475 BPIFCQ8NFQ6 507 aa19.39■□□□□ 0.69
SSBP3-202ENST00000357475 ZNF320A2RRD8 509 aa19.38■□□□□ 0.69
SSBP3-202ENST00000357475 NDUFA4O00483 81 aa19.38■□□□□ 0.69
SSBP3-202ENST00000357475 PF4P02776 101 aa19.38■□□□□ 0.69
SSBP3-202ENST00000357475 ZNF266Q14584 549 aa19.38■□□□□ 0.69
SSBP3-202ENST00000357475 HSD17B11Q8NBQ5 300 aa19.38■□□□□ 0.69
SSBP3-202ENST00000357475 KANTRA0A1W2PQU2 76 aa19.37■□□□□ 0.69
SSBP3-202ENST00000357475 TAAR5O14804 337 aa19.37■□□□□ 0.69
SSBP3-202ENST00000357475 LINC00869P0C866 280 aa19.37■□□□□ 0.69
SSBP3-202ENST00000357475 OPCMLQ14982 345 aa19.37■□□□□ 0.69
SSBP3-202ENST00000357475 USF2Q15853 346 aaPredicted RBP19.37■□□□□ 0.69
SSBP3-202ENST00000357475 LINC00482Q8N8I6 264 aa19.37■□□□□ 0.69
SSBP3-202ENST00000357475 SCGB1C1Q8TD33 95 aa19.37■□□□□ 0.69
SSBP3-202ENST00000357475 TMEM190Q8WZ59 177 aa19.37■□□□□ 0.69
SSBP3-202ENST00000357475 C20orf24Q9BUV8 137 aa19.37■□□□□ 0.69
SSBP3-202ENST00000357475 PARD6GQ9BYG4 376 aaPredicted RBP19.37■□□□□ 0.69
SSBP3-202ENST00000357475 CMYA5Q8N3K9 4069 aa19.37■□□□□ 0.69
SSBP3-202ENST00000357475 MPDU1O75352 247 aa19.36■□□□□ 0.69
SSBP3-202ENST00000357475 SCGB2A1O75556 95 aa19.36■□□□□ 0.69
SSBP3-202ENST00000357475 IL4P05112 153 aa19.36■□□□□ 0.69
SSBP3-202ENST00000357475 C1QL4Q86Z23 238 aa19.36■□□□□ 0.69
SSBP3-202ENST00000357475 OR51G1Q8NGK1 321 aa19.36■□□□□ 0.69
SSBP3-202ENST00000357475 Q8WTZ3 238 aa19.36■□□□□ 0.69
SSBP3-202ENST00000357475 SH3BGRL3Q9H299 93 aa19.36■□□□□ 0.69
SSBP3-202ENST00000357475 WI2-2373I1.2A0A1W2PRP0 233 aa19.35■□□□□ 0.69
SSBP3-202ENST00000357475 M0QZ24 198 aa19.35■□□□□ 0.69
SSBP3-202ENST00000357475 PRR20EP86478 221 aa19.35■□□□□ 0.69
SSBP3-202ENST00000357475 PRR20CP86479 221 aa19.35■□□□□ 0.69
SSBP3-202ENST00000357475 PRR20DP86480 221 aa19.35■□□□□ 0.69
SSBP3-202ENST00000357475 PRR20BP86481 221 aa19.35■□□□□ 0.69
SSBP3-202ENST00000357475 PRR20AP86496 221 aa19.35■□□□□ 0.69
SSBP3-202ENST00000357475 FAM106AQ4KMX7 169 aa19.35■□□□□ 0.69
SSBP3-202ENST00000357475 TM4SF20Q53R12 229 aa19.35■□□□□ 0.69
SSBP3-202ENST00000357475 STPG3Q8N7X2 389 aa19.35■□□□□ 0.69
SSBP3-202ENST00000357475 PXMP4Q9Y6I8 212 aa19.35■□□□□ 0.69
SSBP3-202ENST00000357475 HNRNPCP07910 306 aaKnown RBP eCLIP19.35■□□□□ 0.692e-6■■■□□ 18.7
SSBP3-202ENST00000357475 LYZP61626 148 aa19.35■□□□□ 0.69
SSBP3-202ENST00000357475 REC114Q7Z4M0 266 aa19.35■□□□□ 0.69
SSBP3-202ENST00000357475 ZNF471Q9BX82 626 aaPredicted RBP19.35■□□□□ 0.69
SSBP3-202ENST00000357475 DOK5Q9P104 306 aa19.35■□□□□ 0.69
SSBP3-202ENST00000357475 BORCS7-ASMTA0A0B4J1R7 106 aa19.34■□□□□ 0.69
SSBP3-202ENST00000357475 ATP6V0CP27449 155 aa19.34■□□□□ 0.69
SSBP3-202ENST00000357475 RAB31Q13636 194 aa19.34■□□□□ 0.69
SSBP3-202ENST00000357475 RNF125Q96EQ8 232 aa19.34■□□□□ 0.69
SSBP3-202ENST00000357475 PBDC1Q9BVG4 233 aa19.34■□□□□ 0.69
SSBP3-202ENST00000357475 LGALS9O00182 355 aa19.33■□□□□ 0.68
SSBP3-202ENST00000357475 FABP1P07148 127 aa19.33■□□□□ 0.68
SSBP3-202ENST00000357475 RPL29P47914 159 aaKnown RBP19.33■□□□□ 0.68
SSBP3-202ENST00000357475 ARV1Q9H2C2 271 aa19.33■□□□□ 0.68
SSBP3-202ENST00000357475 SELENOKQ9Y6D0 94 aa19.33■□□□□ 0.68
SSBP3-202ENST00000357475 IGHV3-49A0A0A0MS15 119 aa19.32■□□□□ 0.68
SSBP3-202ENST00000357475 TMEM213A2RRL7 107 aa19.32■□□□□ 0.68
SSBP3-202ENST00000357475 OVOL1O14753 267 aa19.32■□□□□ 0.68
SSBP3-202ENST00000357475 JTBO76095 146 aa19.32■□□□□ 0.68
SSBP3-202ENST00000357475 APOHP02749 345 aaPredicted RBP19.32■□□□□ 0.68
SSBP3-202ENST00000357475 ORM2P19652 201 aa19.32■□□□□ 0.68
SSBP3-202ENST00000357475 SELENOTP62341 195 aa19.32■□□□□ 0.68
SSBP3-202ENST00000357475 GCSAMLQ5JQS6 135 aa19.32■□□□□ 0.68
SSBP3-202ENST00000357475 IL34Q6ZMJ4 242 aa19.32■□□□□ 0.68
SSBP3-202ENST00000357475 OR9G4Q8NGQ1 327 aa19.32■□□□□ 0.68
SSBP3-202ENST00000357475 SLC39A9Q9NUM3 307 aa19.32■□□□□ 0.68
SSBP3-202ENST00000357475 B2MP61769 119 aa19.31■□□□□ 0.68
SSBP3-202ENST00000357475 PATE2Q6UY27 113 aa19.31■□□□□ 0.68
SSBP3-202ENST00000357475 ADAMTSL5Q6ZMM2 481 aa19.31■□□□□ 0.68
SSBP3-202ENST00000357475 OR1B1Q8NGR6 318 aa19.31■□□□□ 0.68
SSBP3-202ENST00000357475 GINS3Q9BRX5 216 aa19.31■□□□□ 0.68
SSBP3-202ENST00000357475 IGHV3OR16-13A0A075B7E8 117 aa19.3■□□□□ 0.68
SSBP3-202ENST00000357475 IGHV3-74A0A0B4J1X5 117 aa19.3■□□□□ 0.68
SSBP3-202ENST00000357475 A8MWP6 167 aa19.3■□□□□ 0.68
SSBP3-202ENST00000357475 ZNF709Q8N972 641 aa19.3■□□□□ 0.68
SSBP3-202ENST00000357475 PKD1L1Q8TDX9 2849 aa19.3■□□□□ 0.68
SSBP3-202ENST00000357475 ELLP55199 621 aaPredicted RBP19.3■□□□□ 0.68
SSBP3-202ENST00000357475 SLC25A32Q9H2D1 315 aa19.3■□□□□ 0.68
SSBP3-202ENST00000357475 IGHV3-66A0A0C4DH42 116 aa19.29■□□□□ 0.68
SSBP3-202ENST00000357475 C2orf70A6NJV1 201 aa19.29■□□□□ 0.68
SSBP3-202ENST00000357475 C17orf112F2Z3M2 114 aa19.29■□□□□ 0.68
SSBP3-202ENST00000357475 PLP1P60201 277 aa19.29■□□□□ 0.68
SSBP3-202ENST00000357475 TMEM37Q8WXS4 190 aa19.29■□□□□ 0.68
SSBP3-202ENST00000357475 UHRF2Q96PU4 802 aa19.29■□□□□ 0.68
SSBP3-202ENST00000357475 VSIRQ9H7M9 311 aa19.29■□□□□ 0.68
SSBP3-202ENST00000357475 DAZ1Q9NQZ3 744 aaKnown RBP19.29■□□□□ 0.68
SSBP3-202ENST00000357475 UFC1Q9Y3C8 167 aa19.29■□□□□ 0.68
SSBP3-202ENST00000357475 CSN3P07498 182 aa19.28■□□□□ 0.68
SSBP3-202ENST00000357475 FFAR4Q5NUL3 377 aa19.28■□□□□ 0.68
SSBP3-202ENST00000357475 TIMM9Q9Y5J7 89 aa19.28■□□□□ 0.68
SSBP3-202ENST00000357475 PLA2G2EQ9NZK7 142 aa19.27■□□□□ 0.68
SSBP3-202ENST00000357475 MRPL27Q9P0M9 148 aaKnown RBP19.27■□□□□ 0.68
SSBP3-202ENST00000357475 K7EMT4 169 aa19.26■□□□□ 0.67
SSBP3-202ENST00000357475 HYPMO75409 117 aa19.26■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms