RNA–Protein interactions for RNA: ENST00000357365.7

SDCCAG3-202, Transcript of Serologically defined colon cancer antigen 3, humanhuman

APPRIS P4 TSL 5 BASIC

Gene SDCCAG3, Length 2,304 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCCAG3-202ENST00000357365 HSPB9Q9BQS6 159 aa22.51■■□□□ 1.19
SDCCAG3-202ENST00000357365 POLR3KQ9Y2Y1 108 aaPredicted RBP22.51■■□□□ 1.19
SDCCAG3-202ENST00000357365 GOSR1O95249 250 aa22.51■■□□□ 1.19
SDCCAG3-202ENST00000357365 PAX8Q06710 450 aa22.51■■□□□ 1.19
SDCCAG3-202ENST00000357365 CLEC2AQ6UVW9 174 aa22.51■■□□□ 1.19
SDCCAG3-202ENST00000357365 RASL11BQ9BPW5 248 aa22.51■■□□□ 1.19
SDCCAG3-202ENST00000357365 A0A1W2PPQ1 181 aa22.5■■□□□ 1.19
SDCCAG3-202ENST00000357365 FAM3BP58499 235 aaPredicted RBP22.5■■□□□ 1.19
SDCCAG3-202ENST00000357365 HELTA6NFD8 242 aa22.49■■□□□ 1.19
SDCCAG3-202ENST00000357365 SH2D7A6NKC9 451 aaPredicted RBP22.49■■□□□ 1.19
SDCCAG3-202ENST00000357365 LINC00479Q96M42 142 aa22.49■■□□□ 1.19
SDCCAG3-202ENST00000357365 CENPWQ5EE01 88 aa22.49■■□□□ 1.19
SDCCAG3-202ENST00000357365 BLNKQ8WV28 456 aa22.49■■□□□ 1.19
SDCCAG3-202ENST00000357365 ANKRD17O75179 2603 aaKnown RBP22.49■■□□□ 1.19
SDCCAG3-202ENST00000357365 IGLV11-55A0A075B6I3 123 aa22.48■■□□□ 1.19
SDCCAG3-202ENST00000357365 A1L4Q6 167 aa22.48■■□□□ 1.19
SDCCAG3-202ENST00000357365 H3BTX0 84 aa22.48■■□□□ 1.19
SDCCAG3-202ENST00000357365 FABP9Q0Z7S8 132 aa22.48■■□□□ 1.19
SDCCAG3-202ENST00000357365 OR5I1Q13606 314 aa22.48■■□□□ 1.19
SDCCAG3-202ENST00000357365 BRD3OSQ6XYD6 125 aa22.48■■□□□ 1.19
SDCCAG3-202ENST00000357365 PYGO2Q9BRQ0 406 aa22.48■■□□□ 1.19
SDCCAG3-202ENST00000357365 NPIPB5A8MRT5 1133 aa22.48■■□□□ 1.19
SDCCAG3-202ENST00000357365 TEX38Q6PEX7 206 aa22.48■■□□□ 1.19
SDCCAG3-202ENST00000357365 USP9YO00507 2555 aaPredicted RBP22.47■■□□□ 1.19
SDCCAG3-202ENST00000357365 C9JCJ5 164 aa22.47■■□□□ 1.19
SDCCAG3-202ENST00000357365 S100PP25815 95 aa22.47■■□□□ 1.19
SDCCAG3-202ENST00000357365 PLP1P60201 277 aa22.47■■□□□ 1.19
SDCCAG3-202ENST00000357365 MDFIC2A0A1B0GVS7 189 aa22.47■■□□□ 1.19
SDCCAG3-202ENST00000357365 TTC9CQ8N5M4 171 aa22.47■■□□□ 1.19
SDCCAG3-202ENST00000357365 HIST1H2BKO60814 126 aa22.46■■□□□ 1.19
SDCCAG3-202ENST00000357365 IGHV3-23P01764 117 aa22.46■■□□□ 1.19
SDCCAG3-202ENST00000357365 HIST1H2BJP06899 126 aa22.46■■□□□ 1.19
SDCCAG3-202ENST00000357365 HIST1H2BOP23527 126 aa22.46■■□□□ 1.19
SDCCAG3-202ENST00000357365 BRS3P32247 399 aa22.46■■□□□ 1.19
SDCCAG3-202ENST00000357365 HIST1H2BBP33778 126 aa22.46■■□□□ 1.19
SDCCAG3-202ENST00000357365 HIST1H2BDP58876 126 aa22.46■■□□□ 1.19
SDCCAG3-202ENST00000357365 HIST1H2BCP62807 126 aa22.46■■□□□ 1.19
SDCCAG3-202ENST00000357365 RANP62826 216 aaKnown RBP22.46■■□□□ 1.19
SDCCAG3-202ENST00000357365 HIST2H2BEQ16778 126 aa22.46■■□□□ 1.19
SDCCAG3-202ENST00000357365 HIST2H2BFQ5QNW6 126 aaPredicted RBP22.46■■□□□ 1.19
SDCCAG3-202ENST00000357365 ZNF329Q86UD4 541 aa22.46■■□□□ 1.19
SDCCAG3-202ENST00000357365 FRZBQ92765 325 aa22.46■■□□□ 1.19
SDCCAG3-202ENST00000357365 HIST1H2BHQ93079 126 aa22.46■■□□□ 1.19
SDCCAG3-202ENST00000357365 HIST1H2BNQ99877 126 aa22.46■■□□□ 1.19
SDCCAG3-202ENST00000357365 HIST1H2BMQ99879 126 aa22.46■■□□□ 1.19
SDCCAG3-202ENST00000357365 A0A0U1RQK1 487 aa22.46■■□□□ 1.19
SDCCAG3-202ENST00000357365 RD3LP0DJH9 198 aa22.46■■□□□ 1.19
SDCCAG3-202ENST00000357365 CD99P14209 185 aa22.46■■□□□ 1.19
SDCCAG3-202ENST00000357365 TRAV40A0A0B4J280 105 aa22.45■■□□□ 1.18
SDCCAG3-202ENST00000357365 GNG4P50150 75 aa22.45■■□□□ 1.18
SDCCAG3-202ENST00000357365 HIGD1AQ9Y241 93 aa22.45■■□□□ 1.18
SDCCAG3-202ENST00000357365 SOX21Q9Y651 276 aaPredicted RBP22.45■■□□□ 1.18
SDCCAG3-202ENST00000357365 PTPN13Q12923 2485 aa22.45■■□□□ 1.18
SDCCAG3-202ENST00000357365 PHOX2AO14813 284 aa22.45■■□□□ 1.18
SDCCAG3-202ENST00000357365 GP9P14770 177 aa22.45■■□□□ 1.18
SDCCAG3-202ENST00000357365 OR1L6Q8NGR2 347 aa22.45■■□□□ 1.18
SDCCAG3-202ENST00000357365 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP22.44■■□□□ 1.181e-6■■■□□ 15
SDCCAG3-202ENST00000357365 F8W735 103 aaPredicted RBP22.44■■□□□ 1.18
SDCCAG3-202ENST00000357365 NDUFS8O00217 210 aa22.44■■□□□ 1.18
SDCCAG3-202ENST00000357365 UBE2CO00762 179 aa22.44■■□□□ 1.18
SDCCAG3-202ENST00000357365 LINC01548A6NM66 108 aa22.43■■□□□ 1.18
SDCCAG3-202ENST00000357365 AP4M1O00189 453 aa22.43■■□□□ 1.18
SDCCAG3-202ENST00000357365 SLC17A3O00476 420 aa22.43■■□□□ 1.18
SDCCAG3-202ENST00000357365 OR2J3O76001 311 aa22.43■■□□□ 1.18
SDCCAG3-202ENST00000357365 NDUFB8O95169 186 aa22.43■■□□□ 1.18
SDCCAG3-202ENST00000357365 GNG5P63218 68 aa22.43■■□□□ 1.18
SDCCAG3-202ENST00000357365 SLC25A39Q9BZJ4 359 aaPredicted RBP22.43■■□□□ 1.18
SDCCAG3-202ENST00000357365 C1RLQ9NZP8 487 aa22.43■■□□□ 1.18
SDCCAG3-202ENST00000357365 TMEM219Q86XT9 240 aa22.43■■□□□ 1.18
SDCCAG3-202ENST00000357365 BCL6BQ8N143 479 aaPredicted RBP22.43■■□□□ 1.18
SDCCAG3-202ENST00000357365 OR10G8Q8NGN5 311 aa22.43■■□□□ 1.18
SDCCAG3-202ENST00000357365 GGCTO75223 188 aaKnown RBP22.42■■□□□ 1.18
SDCCAG3-202ENST00000357365 HLA-DRB1P01911 266 aa22.42■■□□□ 1.18
SDCCAG3-202ENST00000357365 SRP14P37108 136 aaKnown RBP22.42■■□□□ 1.18
SDCCAG3-202ENST00000357365 NHLRC2Q8NBF2 726 aa22.42■■□□□ 1.18
SDCCAG3-202ENST00000357365 SGMS2Q8NHU3 365 aa22.42■■□□□ 1.18
SDCCAG3-202ENST00000357365 CSPG4Q6UVK1 2322 aa22.42■■□□□ 1.18
SDCCAG3-202ENST00000357365 TRAV34A0A0B4J273 112 aa22.42■■□□□ 1.18
SDCCAG3-202ENST00000357365 NBEAP1P0C6P0 100 aa22.42■■□□□ 1.18
SDCCAG3-202ENST00000357365 TRGC1P0CF51 173 aa22.42■■□□□ 1.18
SDCCAG3-202ENST00000357365 IGHV4-38-2P0DP08 117 aa22.42■■□□□ 1.18
SDCCAG3-202ENST00000357365 NDUFA6P56556 154 aa22.42■■□□□ 1.18
SDCCAG3-202ENST00000357365 IGLV2-8P01709 118 aa22.41■■□□□ 1.18
SDCCAG3-202ENST00000357365 MYCNOSP40205 109 aa22.41■■□□□ 1.18
SDCCAG3-202ENST00000357365 IGF2BP2-AS1Q96M15 143 aa22.41■■□□□ 1.18
SDCCAG3-202ENST00000357365 SRD5A3Q9H8P0 318 aa22.41■■□□□ 1.18
SDCCAG3-202ENST00000357365 MRPL27Q9P0M9 148 aaKnown RBP22.41■■□□□ 1.18
SDCCAG3-202ENST00000357365 ABCA12Q86UK0 2595 aa22.41■■□□□ 1.18
SDCCAG3-202ENST00000357365 IGHV1-69DA0A0B4J2H0 117 aa22.41■■□□□ 1.18
SDCCAG3-202ENST00000357365 IGHV1-69P01742 117 aa22.41■■□□□ 1.18
SDCCAG3-202ENST00000357365 ECSCRQ19T08 205 aa22.41■■□□□ 1.18
SDCCAG3-202ENST00000357365 PPP1R2P9O14990 202 aa22.4■■□□□ 1.18
SDCCAG3-202ENST00000357365 ATP6V0E1O15342 81 aa22.4■■□□□ 1.18
SDCCAG3-202ENST00000357365 GNG7O60262 68 aa22.4■■□□□ 1.18
SDCCAG3-202ENST00000357365 LINC00518Q8N0U6 118 aa22.4■■□□□ 1.18
SDCCAG3-202ENST00000357365 STXBP6Q8NFX7 210 aa22.4■■□□□ 1.18
SDCCAG3-202ENST00000357365 LY96Q9Y6Y9 160 aa22.4■■□□□ 1.18
SDCCAG3-202ENST00000357365 ZANQ9Y493 2812 aa22.4■■□□□ 1.18
SDCCAG3-202ENST00000357365 PPP5D1E7EU14 171 aa22.4■■□□□ 1.18
SDCCAG3-202ENST00000357365 ZNF600Q6ZNG1 722 aa22.4■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms