RNA–Protein interactions for RNA: ENST00000356994.6

SCRIB-202, Transcript of scribbled planar cell polarity protein, humanhuman

APPRIS P4 TSL 2 BASIC

Gene SCRIB, Length 5,218 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCRIB-202ENST00000356994 KIR3DS1Q14943 382 aa13.82□□□□□ -0.2
SCRIB-202ENST00000356994 SRSF8Q9BRL6 282 aaKnown RBP13.82□□□□□ -0.2
SCRIB-202ENST00000356994 TDRD6O60522 2096 aaKnown RBP13.82□□□□□ -0.2
SCRIB-202ENST00000356994 M0R381 172 aa13.82□□□□□ -0.2
SCRIB-202ENST00000356994 PRTN3P24158 256 aa13.82□□□□□ -0.2
SCRIB-202ENST00000356994 TIMP3P35625 211 aa13.82□□□□□ -0.2
SCRIB-202ENST00000356994 BSPH1Q075Z2 132 aa13.82□□□□□ -0.2
SCRIB-202ENST00000356994 C9orf106Q8NAJ2 232 aa13.82□□□□□ -0.2
SCRIB-202ENST00000356994 FAM181BA6NEQ2 426 aa13.82□□□□□ -0.2
SCRIB-202ENST00000356994 DNAL4O96015 105 aa13.82□□□□□ -0.2
SCRIB-202ENST00000356994 Q6ZS49 121 aa13.82□□□□□ -0.2
SCRIB-202ENST00000356994 TNFRSF18Q9Y5U5 241 aa13.82□□□□□ -0.2
SCRIB-202ENST00000356994 GREB1Q4ZG55 1949 aa13.82□□□□□ -0.2
SCRIB-202ENST00000356994 UNQ6494/PRO21346Q6UXR6 183 aa13.81□□□□□ -0.2
SCRIB-202ENST00000356994 H3BRM9 83 aa13.81□□□□□ -0.2
SCRIB-202ENST00000356994 QRFPP83859 136 aa13.81□□□□□ -0.2
SCRIB-202ENST00000356994 TREML4Q6UXN2 200 aa13.81□□□□□ -0.2
SCRIB-202ENST00000356994 LINC01549A6NIU2 74 aa13.81□□□□□ -0.2
SCRIB-202ENST00000356994 CFHR1Q03591 330 aa13.81□□□□□ -0.2
SCRIB-202ENST00000356994 LY6EQ16553 131 aa13.81□□□□□ -0.2
SCRIB-202ENST00000356994 CENPVQ7Z7K6 275 aaPredicted RBP13.81□□□□□ -0.2
SCRIB-202ENST00000356994 CCL19Q99731 98 aa13.81□□□□□ -0.2
SCRIB-202ENST00000356994 TMEM133Q9H2Q1 129 aa13.81□□□□□ -0.2
SCRIB-202ENST00000356994 VSIRQ9H7M9 311 aa13.81□□□□□ -0.2
SCRIB-202ENST00000356994 F8W1H4 67 aa13.81□□□□□ -0.2
SCRIB-202ENST00000356994 LTBRP36941 435 aa13.81□□□□□ -0.2
SCRIB-202ENST00000356994 CACNG7P62955 275 aa13.81□□□□□ -0.2
SCRIB-202ENST00000356994 ZFP36L1Q07352 338 aaKnown RBP13.81□□□□□ -0.2
SCRIB-202ENST00000356994 MORN3Q6PF18 240 aaPredicted RBP13.81□□□□□ -0.2
SCRIB-202ENST00000356994 EFNA2O43921 213 aa13.8□□□□□ -0.2
SCRIB-202ENST00000356994 TMEM14EPQ6UXP3 125 aa13.8□□□□□ -0.2
SCRIB-202ENST00000356994 RNF125Q96EQ8 232 aa13.8□□□□□ -0.2
SCRIB-202ENST00000356994 C9orf118A6NHY6 69 aa13.8□□□□□ -0.2
SCRIB-202ENST00000356994 ASXL3Q9C0F0 2248 aa13.8□□□□□ -0.2
SCRIB-202ENST00000356994 SCN2AQ99250 2005 aa13.8□□□□□ -0.2
SCRIB-202ENST00000356994 IGHV3OR16-12A0A075B7B8 117 aa13.8□□□□□ -0.2
SCRIB-202ENST00000356994 LEPP41159 167 aa13.8□□□□□ -0.2
SCRIB-202ENST00000356994 C17orf82Q86X59 251 aaPredicted RBP13.8□□□□□ -0.2
SCRIB-202ENST00000356994 ACTL10Q5JWF8 245 aa13.8□□□□□ -0.2
SCRIB-202ENST00000356994 CDPF1Q6NVV7 123 aa13.8□□□□□ -0.2
SCRIB-202ENST00000356994 GGTLC1Q9BX51 225 aa13.8□□□□□ -0.2
SCRIB-202ENST00000356994 PSG8Q9UQ74 426 aa13.8□□□□□ -0.2
SCRIB-202ENST00000356994 CACNA1IQ9P0X4 2223 aa13.8□□□□□ -0.2
SCRIB-202ENST00000356994 IGHV3-35A0A0C4DH35 117 aa13.79□□□□□ -0.2
SCRIB-202ENST00000356994 TRACP01848 142 aa13.79□□□□□ -0.2
SCRIB-202ENST00000356994 TMEM42Q69YG0 159 aa13.79□□□□□ -0.2
SCRIB-202ENST00000356994 DUX4L9Q6RFH8 374 aaPredicted RBP13.79□□□□□ -0.2
SCRIB-202ENST00000356994 SLC25A2Q9BXI2 301 aa13.79□□□□□ -0.2
SCRIB-202ENST00000356994 DEPPQ9NTK1 212 aa13.79□□□□□ -0.2
SCRIB-202ENST00000356994 SCN8AQ9UQD0 1980 aa13.79□□□□□ -0.2
SCRIB-202ENST00000356994 LTBP1Q14766 1721 aa13.79□□□□□ -0.2
SCRIB-202ENST00000356994 IGLC2P0DOY2 106 aa13.79□□□□□ -0.2
SCRIB-202ENST00000356994 IGLC3P0DOY3 106 aa13.79□□□□□ -0.2
SCRIB-202ENST00000356994 SUMO2P61956 95 aaKnown RBP13.79□□□□□ -0.2
SCRIB-202ENST00000356994 GNG5P63218 68 aa13.79□□□□□ -0.2
SCRIB-202ENST00000356994 C8orf46Q8TAG6 207 aa13.79□□□□□ -0.2
SCRIB-202ENST00000356994 TMEM101Q96IK0 257 aa13.79□□□□□ -0.2
SCRIB-202ENST00000356994 SIP14410 1827 aa13.79□□□□□ -0.2
SCRIB-202ENST00000356994 PNRC2Q9NPJ4 139 aaKnown RBP13.79□□□□□ -0.2
SCRIB-202ENST00000356994 TRAV2A0A0B4J234 112 aa13.78□□□□□ -0.2
SCRIB-202ENST00000356994 CLPSP04118 112 aa13.78□□□□□ -0.2
SCRIB-202ENST00000356994 LINC01560Q8TB33 94 aa13.78□□□□□ -0.2
SCRIB-202ENST00000356994 SRSF1Q07955 248 aaKnown RBP eCLIP13.78□□□□□ -0.22e-7■■■■□ 24.9
SCRIB-202ENST00000356994 SMPXQ9UHP9 88 aa13.78□□□□□ -0.2
SCRIB-202ENST00000356994 IGKV1-27A0A075B6S5 117 aa13.78□□□□□ -0.2
SCRIB-202ENST00000356994 MMP23AO75900 390 aa13.78□□□□□ -0.2
SCRIB-202ENST00000356994 DPM2O94777 84 aa13.78□□□□□ -0.2
SCRIB-202ENST00000356994 TNFRSF6BO95407 300 aa13.78□□□□□ -0.2
SCRIB-202ENST00000356994 KIR2DL5BA0A0G2JN68 375 aa13.77□□□□□ -0.2
SCRIB-202ENST00000356994 KIR2DL5BA0A0G2JPC4 375 aa13.77□□□□□ -0.2
SCRIB-202ENST00000356994 F2Z2F3 143 aa13.77□□□□□ -0.2
SCRIB-202ENST00000356994 MLNRO43193 412 aa13.77□□□□□ -0.2
SCRIB-202ENST00000356994 TCTEX1D4Q5JR98 221 aa13.77□□□□□ -0.2
SCRIB-202ENST00000356994 GGNQ86UU5 652 aa13.77□□□□□ -0.2
SCRIB-202ENST00000356994 KIR2DL5AQ8N109 375 aa13.77□□□□□ -0.2
SCRIB-202ENST00000356994 FGFBP3Q8TAT2 258 aa13.77□□□□□ -0.2
SCRIB-202ENST00000356994 A0A087X0K7 114 aa13.77□□□□□ -0.2
SCRIB-202ENST00000356994 DLX4Q92988 240 aaPredicted RBP13.77□□□□□ -0.2
SCRIB-202ENST00000356994 WDR90Q96KV7 1748 aa13.77□□□□□ -0.2
SCRIB-202ENST00000356994 BEX4Q9NWD9 120 aaPredicted RBP13.77□□□□□ -0.2
SCRIB-202ENST00000356994 SRRM5B3KS81 715 aa13.77□□□□□ -0.21
SCRIB-202ENST00000356994 PYYP10082 97 aa13.77□□□□□ -0.21
SCRIB-202ENST00000356994 CCL3L1P16619 93 aa13.77□□□□□ -0.21
SCRIB-202ENST00000356994 EVI2AP22794 236 aa13.77□□□□□ -0.21
SCRIB-202ENST00000356994 ORMDL2Q53FV1 153 aa13.77□□□□□ -0.21
SCRIB-202ENST00000356994 HOXA3O43365 443 aaPredicted RBP13.77□□□□□ -0.21
SCRIB-202ENST00000356994 IGHV3-23P01764 117 aa13.77□□□□□ -0.21
SCRIB-202ENST00000356994 TMEM155Q4W5P6 130 aa13.77□□□□□ -0.21
SCRIB-202ENST00000356994 SLC25A48Q6ZT89 311 aaKnown RBP13.77□□□□□ -0.21
SCRIB-202ENST00000356994 TMEM256Q8N2U0 113 aa13.77□□□□□ -0.21
SCRIB-202ENST00000356994 MRAPQ8TCY5 172 aa13.77□□□□□ -0.21
SCRIB-202ENST00000356994 C10orf91Q5T1B1 145 aa13.76□□□□□ -0.21
SCRIB-202ENST00000356994 RPUSD1Q9UJJ7 312 aaKnown RBP13.76□□□□□ -0.21
SCRIB-202ENST00000356994 IGHV3OR16-13A0A075B7E8 117 aa13.76□□□□□ -0.21
SCRIB-202ENST00000356994 IGHV3-74A0A0B4J1X5 117 aa13.76□□□□□ -0.21
SCRIB-202ENST00000356994 NTN3O00634 580 aaPredicted RBP13.76□□□□□ -0.21
SCRIB-202ENST00000356994 RPP25LQ8N5L8 163 aaKnown RBP13.76□□□□□ -0.21
SCRIB-202ENST00000356994 IGHV1-18A0A0C4DH31 117 aa13.76□□□□□ -0.21
SCRIB-202ENST00000356994 CLEC19AQ6UXS0 136 aa13.76□□□□□ -0.21
SCRIB-202ENST00000356994 SAP30O75446 220 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms