RNA–Protein interactions for RNA: ENST00000355683.9

STRN3-201, Transcript of striatin 3, humanhuman

TSL 1 (best) BASIC

Gene STRN3, Length 3,970 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STRN3-201ENST00000355683 TIMD4Q96H15 378 aa12.47□□□□□ -0.41
STRN3-201ENST00000355683 MBNL2Q5VZF2 373 aaKnown RBP12.47□□□□□ -0.41
STRN3-201ENST00000355683 MUC22E2RYF6 1773 aaPredicted RBP12.46□□□□□ -0.41
STRN3-201ENST00000355683 BTF3P20290 206 aaKnown RBP12.46□□□□□ -0.41
STRN3-201ENST00000355683 RPL7P18124 248 aaKnown RBP12.46□□□□□ -0.41
STRN3-201ENST00000355683 TNRC18O15417 2968 aaPredicted RBP12.46□□□□□ -0.42
STRN3-201ENST00000355683 SRRM5B3KS81 715 aa12.46□□□□□ -0.42
STRN3-201ENST00000355683 K7ERU9 68 aa12.46□□□□□ -0.42
STRN3-201ENST00000355683 SS18L1O75177 396 aaPredicted RBP12.46□□□□□ -0.42
STRN3-201ENST00000355683 CNTFRP26992 372 aa12.46□□□□□ -0.42
STRN3-201ENST00000355683 Q1RN00 199 aa12.46□□□□□ -0.42
STRN3-201ENST00000355683 PKD1L2Q7Z442 2459 aa12.46□□□□□ -0.42
STRN3-201ENST00000355683 CDKN1AP38936 164 aa12.45□□□□□ -0.42
STRN3-201ENST00000355683 MSMPQ1L6U9 139 aa12.45□□□□□ -0.42
STRN3-201ENST00000355683 TIMM23BQ5SRD1 257 aa12.45□□□□□ -0.42
STRN3-201ENST00000355683 TWIST1Q15672 202 aa12.45□□□□□ -0.42
STRN3-201ENST00000355683 SCGB1D4Q6XE38 83 aa12.45□□□□□ -0.42
STRN3-201ENST00000355683 Q6ZVH6 145 aa12.45□□□□□ -0.42
STRN3-201ENST00000355683 TPSG1Q9NRR2 321 aa12.45□□□□□ -0.42
STRN3-201ENST00000355683 RIGQ13278 110 aa12.45□□□□□ -0.42
STRN3-201ENST00000355683 COX19Q49B96 90 aa12.45□□□□□ -0.42
STRN3-201ENST00000355683 EXOC3-AS1Q8N2X6 119 aa12.45□□□□□ -0.42
STRN3-201ENST00000355683 FOXA2Q9Y261 457 aaPredicted RBP12.45□□□□□ -0.42
STRN3-201ENST00000355683 KLRD1Q13241 179 aa12.45□□□□□ -0.42
STRN3-201ENST00000355683 NRN1LQ496H8 165 aa12.45□□□□□ -0.42
STRN3-201ENST00000355683 ZNF430Q9H8G1 570 aaPredicted RBP12.45□□□□□ -0.42
STRN3-201ENST00000355683 PPIAL4CA0A0B4J2A2 164 aa12.44□□□□□ -0.42
STRN3-201ENST00000355683 NUPR1O60356 82 aa12.44□□□□□ -0.42
STRN3-201ENST00000355683 IL4P05112 153 aa12.44□□□□□ -0.42
STRN3-201ENST00000355683 PPIAL4GP0DN37 164 aa12.44□□□□□ -0.42
STRN3-201ENST00000355683 CKS2P33552 79 aa12.44□□□□□ -0.42
STRN3-201ENST00000355683 TMEM208Q9BTX3 173 aa12.44□□□□□ -0.42
STRN3-201ENST00000355683 SRRM4A7MD48 611 aaKnown RBP12.44□□□□□ -0.42
STRN3-201ENST00000355683 J3QR89 54 aa12.44□□□□□ -0.42
STRN3-201ENST00000355683 SFTPCP11686 197 aa12.44□□□□□ -0.42
STRN3-201ENST00000355683 AREGP15514 252 aa12.44□□□□□ -0.42
STRN3-201ENST00000355683 C5orf30Q96GV9 206 aa12.44□□□□□ -0.42
STRN3-201ENST00000355683 IFI27L2Q9H2X8 130 aa12.44□□□□□ -0.42
STRN3-201ENST00000355683 NBEAP1P0C6P0 100 aa12.44□□□□□ -0.42
STRN3-201ENST00000355683 LDLRAD2Q5SZI1 272 aa12.44□□□□□ -0.42
STRN3-201ENST00000355683 OR4C13Q8NGP0 309 aa12.44□□□□□ -0.42
STRN3-201ENST00000355683 TMEM70Q9BUB7 260 aa12.44□□□□□ -0.42
STRN3-201ENST00000355683 HSPB8Q9UJY1 196 aa12.44□□□□□ -0.42
STRN3-201ENST00000355683 HIGD1AQ9Y241 93 aa12.44□□□□□ -0.42
STRN3-201ENST00000355683 C22orf34Q6ZV56 151 aa12.43□□□□□ -0.42
STRN3-201ENST00000355683 ODF3L1Q8IXM7 274 aa12.43□□□□□ -0.42
STRN3-201ENST00000355683 IGHV1-69-2A0A0G2JMI3 117 aa12.43□□□□□ -0.42
STRN3-201ENST00000355683 NPPCP23582 126 aa12.43□□□□□ -0.42
STRN3-201ENST00000355683 SSBP2P81877 361 aaPredicted RBP12.43□□□□□ -0.42
STRN3-201ENST00000355683 WFDC12Q8WWY7 111 aa12.43□□□□□ -0.42
STRN3-201ENST00000355683 EPG5Q9HCE0 2579 aa12.43□□□□□ -0.42
STRN3-201ENST00000355683 C15orf61A6NNL5 157 aa12.43□□□□□ -0.42
STRN3-201ENST00000355683 PRRX1P54821 245 aa12.43□□□□□ -0.42
STRN3-201ENST00000355683 TDRG1Q3Y452 100 aa12.43□□□□□ -0.42
STRN3-201ENST00000355683 SCRT1Q9BWW7 348 aa12.43□□□□□ -0.42
STRN3-201ENST00000355683 MBNL3Q9NUK0 354 aaKnown RBP12.43□□□□□ -0.42
STRN3-201ENST00000355683 MRPS18CQ9Y3D5 142 aaKnown RBP12.43□□□□□ -0.42
STRN3-201ENST00000355683 SLC25A15Q9Y619 301 aa12.43□□□□□ -0.42
STRN3-201ENST00000355683 TACC2O95359 2948 aa12.43□□□□□ -0.42
STRN3-201ENST00000355683 C17orf100A8MU93 164 aa12.42□□□□□ -0.42
STRN3-201ENST00000355683 H7C2G1 150 aa12.42□□□□□ -0.42
STRN3-201ENST00000355683 TXNDC17Q9BRA2 123 aa12.42□□□□□ -0.42
STRN3-201ENST00000355683 NUP210LQ5VU65 1888 aa12.42□□□□□ -0.42
STRN3-201ENST00000355683 ZFHX4Q86UP3 3567 aa12.42□□□□□ -0.42
STRN3-201ENST00000355683 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.42□□□□□ -0.42
STRN3-201ENST00000355683 C7orf71A4D174 169 aa12.42□□□□□ -0.42
STRN3-201ENST00000355683 PLP1P60201 277 aa12.42□□□□□ -0.42
STRN3-201ENST00000355683 C11orf53Q8IXP5 236 aa12.42□□□□□ -0.42
STRN3-201ENST00000355683 RNF138Q8WVD3 245 aa12.42□□□□□ -0.42
STRN3-201ENST00000355683 AP5S1Q9NUS5 200 aa12.42□□□□□ -0.42
STRN3-201ENST00000355683 MSRB2Q9Y3D2 182 aa12.42□□□□□ -0.42
STRN3-201ENST00000355683 DLEU1O43261 78 aa12.41□□□□□ -0.42
STRN3-201ENST00000355683 LY6EQ16553 131 aa12.41□□□□□ -0.42
STRN3-201ENST00000355683 KIAA1549Q9HCM3 1950 aa12.41□□□□□ -0.42
STRN3-201ENST00000355683 H3BVH4 76 aa12.41□□□□□ -0.42
STRN3-201ENST00000355683 ZNF324O75467 553 aaPredicted RBP12.41□□□□□ -0.42
STRN3-201ENST00000355683 PFN1P07737 140 aaKnown RBP12.41□□□□□ -0.42
STRN3-201ENST00000355683 TBR1Q16650 682 aa12.41□□□□□ -0.42
STRN3-201ENST00000355683 ZNF502Q8TBZ5 544 aa12.41□□□□□ -0.42
STRN3-201ENST00000355683 ALKBH7Q9BT30 221 aaPredicted RBP12.41□□□□□ -0.42
STRN3-201ENST00000355683 M0R3E3 92 aa12.41□□□□□ -0.42
STRN3-201ENST00000355683 SRSF9Q13242 221 aaKnown RBP eCLIP12.41□□□□□ -0.42
STRN3-201ENST00000355683 LY6DQ14210 128 aa12.41□□□□□ -0.42
STRN3-201ENST00000355683 TMEM200BQ69YZ2 307 aa12.41□□□□□ -0.42
STRN3-201ENST00000355683 DIRC2Q96SL1 478 aa12.41□□□□□ -0.42
STRN3-201ENST00000355683 POLR3KQ9Y2Y1 108 aaPredicted RBP12.41□□□□□ -0.42
STRN3-201ENST00000355683 TRAV8-6A0A0B4J262 113 aa12.4□□□□□ -0.42
STRN3-201ENST00000355683 IGLV2-14P01704 120 aa12.4□□□□□ -0.42
STRN3-201ENST00000355683 HLA-DRB1P01911 266 aa12.4□□□□□ -0.42
STRN3-201ENST00000355683 MGPP08493 103 aa12.4□□□□□ -0.42
STRN3-201ENST00000355683 ELOVL5Q9NYP7 299 aa12.4□□□□□ -0.42
STRN3-201ENST00000355683 A0A1B0GWJ7 208 aa12.4□□□□□ -0.42
STRN3-201ENST00000355683 PEX7O00628 323 aa12.4□□□□□ -0.42
STRN3-201ENST00000355683 CA7P43166 264 aa12.4□□□□□ -0.42
STRN3-201ENST00000355683 C2orf83Q53S99 150 aa12.4□□□□□ -0.42
STRN3-201ENST00000355683 hDV102S1A0JD36 115 aa12.4□□□□□ -0.42
STRN3-201ENST00000355683 YPEL1O60688 119 aa12.4□□□□□ -0.42
STRN3-201ENST00000355683 IGKV3-20P01619 116 aa12.4□□□□□ -0.42
STRN3-201ENST00000355683 IGKV3-15P01624 115 aa12.4□□□□□ -0.42
STRN3-201ENST00000355683 APOHP02749 345 aaPredicted RBP12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms