RNA–Protein interactions for RNA: ENST00000355430.4

COLCA1-201, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best)

Gene COLCA1, Length 5,442 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-201ENST00000355430 BPESC1Q9GZL8 116 aa10.1□□□□□ -0.79
COLCA1-201ENST00000355430 FBXL7Q9UJT9 491 aa10.1□□□□□ -0.79
COLCA1-201ENST00000355430 FAM181BA6NEQ2 426 aa10.09□□□□□ -0.79
COLCA1-201ENST00000355430 CGB1A6NKQ9 187 aa10.09□□□□□ -0.79
COLCA1-201ENST00000355430 SPANXN1Q5VSR9 72 aa10.09□□□□□ -0.79
COLCA1-201ENST00000355430 ZNF841Q6ZN19 808 aa10.09□□□□□ -0.79
COLCA1-201ENST00000355430 MBNL3Q9NUK0 354 aaKnown RBP10.09□□□□□ -0.79
COLCA1-201ENST00000355430 RNF114Q9Y508 228 aa10.09□□□□□ -0.79
COLCA1-201ENST00000355430 ESPL1Q14674 2120 aa10.09□□□□□ -0.79
COLCA1-201ENST00000355430 MUC21A0A0G2JKD1 596 aa10.09□□□□□ -0.79
COLCA1-201ENST00000355430 MUC21A0A140T8X8 626 aa10.09□□□□□ -0.79
COLCA1-201ENST00000355430 NUDT3O95989 172 aa10.09□□□□□ -0.79
COLCA1-201ENST00000355430 Q1RN00 199 aa10.09□□□□□ -0.79
COLCA1-201ENST00000355430 MUC21Q5SSG8 566 aa10.09□□□□□ -0.79
COLCA1-201ENST00000355430 GPR82Q96P67 336 aa10.09□□□□□ -0.79
COLCA1-201ENST00000355430 AP5S1Q9NUS5 200 aa10.09□□□□□ -0.79
COLCA1-201ENST00000355430 FBLL1A6NHQ2 334 aaKnown RBP10.09□□□□□ -0.79
COLCA1-201ENST00000355430 RPL7P18124 248 aaKnown RBP10.09□□□□□ -0.79
COLCA1-201ENST00000355430 VMO1Q7Z5L0 202 aa10.09□□□□□ -0.79
COLCA1-201ENST00000355430 EPDR1Q9UM22 224 aa10.09□□□□□ -0.79
COLCA1-201ENST00000355430 WDR86Q86TI4 376 aa10.09□□□□□ -0.79
COLCA1-201ENST00000355430 TEX45Q8NA69 505 aa10.08□□□□□ -0.8
COLCA1-201ENST00000355430 SYT8Q8NBV8 401 aa10.08□□□□□ -0.8
COLCA1-201ENST00000355430 POLR3KQ9Y2Y1 108 aaPredicted RBP10.08□□□□□ -0.8
COLCA1-201ENST00000355430 MOB4Q9Y3A3 225 aa10.08□□□□□ -0.8
COLCA1-201ENST00000355430 SNCGO76070 127 aa10.08□□□□□ -0.8
COLCA1-201ENST00000355430 TMEM155Q4W5P6 130 aa10.08□□□□□ -0.8
COLCA1-201ENST00000355430 MINOS1Q5TGZ0 78 aa10.08□□□□□ -0.8
COLCA1-201ENST00000355430 MINOS1-NBL1R4GNA1 71 aa10.08□□□□□ -0.8
COLCA1-201ENST00000355430 OOSP1A8MZH6 123 aa10.08□□□□□ -0.8
COLCA1-201ENST00000355430 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP10.08□□□□□ -0.8
COLCA1-201ENST00000355430 PSG9Q00887 426 aa10.08□□□□□ -0.8
COLCA1-201ENST00000355430 NUDT10Q8NFP7 164 aa10.08□□□□□ -0.8
COLCA1-201ENST00000355430 NUDT11Q96G61 164 aa10.08□□□□□ -0.8
COLCA1-201ENST00000355430 PMCHL2Q9BQD1 86 aa10.08□□□□□ -0.8
COLCA1-201ENST00000355430 TRAV9-2A0A087WT02 112 aa10.08□□□□□ -0.8
COLCA1-201ENST00000355430 M0R1W7 72 aa10.08□□□□□ -0.8
COLCA1-201ENST00000355430 MSMBP08118 114 aa10.08□□□□□ -0.8
COLCA1-201ENST00000355430 DLX6P56179 175 aa10.08□□□□□ -0.8
COLCA1-201ENST00000355430 GTSCR1Q86UQ5 136 aa10.08□□□□□ -0.8
COLCA1-201ENST00000355430 MAP1LC3AQ9H492 121 aa10.08□□□□□ -0.8
COLCA1-201ENST00000355430 E7EQL1 145 aa10.08□□□□□ -0.8
COLCA1-201ENST00000355430 IGHV3-23P01764 117 aa10.08□□□□□ -0.8
COLCA1-201ENST00000355430 PRB4P10163 310 aaPredicted RBP10.08□□□□□ -0.8
COLCA1-201ENST00000355430 GCSHP23434 173 aa10.08□□□□□ -0.8
COLCA1-201ENST00000355430 SCGB1D4Q6XE38 83 aa10.08□□□□□ -0.8
COLCA1-201ENST00000355430 TTC28Q96AY4 2481 aa10.07□□□□□ -0.8
COLCA1-201ENST00000355430 IGKV1D-17A0A075B6S4 117 aa10.07□□□□□ -0.8
COLCA1-201ENST00000355430 A0A1B0GUT8 65 aa10.07□□□□□ -0.8
COLCA1-201ENST00000355430 C10orf55Q5SWW7 151 aa10.07□□□□□ -0.8
COLCA1-201ENST00000355430 SOX21Q9Y651 276 aaPredicted RBP10.07□□□□□ -0.8
COLCA1-201ENST00000355430 NIT1Q86X76 327 aa10.07□□□□□ -0.8
COLCA1-201ENST00000355430 AREGP15514 252 aa10.07□□□□□ -0.8
COLCA1-201ENST00000355430 ADIPOQQ15848 244 aa10.07□□□□□ -0.8
COLCA1-201ENST00000355430 C3orf36Q3SXR2 165 aa10.07□□□□□ -0.8
COLCA1-201ENST00000355430 IGHV3-35A0A0C4DH35 117 aa10.07□□□□□ -0.8
COLCA1-201ENST00000355430 SAMD13Q5VXD3 122 aa10.07□□□□□ -0.8
COLCA1-201ENST00000355430 TMEM136Q6ZRR5 245 aa10.07□□□□□ -0.8
COLCA1-201ENST00000355430 PSMB11A5LHX3 300 aa10.06□□□□□ -0.8
COLCA1-201ENST00000355430 FER1L5A0AVI2 2057 aa10.06□□□□□ -0.8
COLCA1-201ENST00000355430 ZNF207O43670 478 aaKnown RBP10.06□□□□□ -0.8
COLCA1-201ENST00000355430 FABP2P12104 132 aa10.06□□□□□ -0.8
COLCA1-201ENST00000355430 C2orf83Q53S99 150 aa10.06□□□□□ -0.8
COLCA1-201ENST00000355430 TSKUQ8WUA8 353 aa10.06□□□□□ -0.8
COLCA1-201ENST00000355430 PRELID3AQ96N28 172 aa10.06□□□□□ -0.8
COLCA1-201ENST00000355430 DENND4AQ7Z401 1863 aa10.06□□□□□ -0.8
COLCA1-201ENST00000355430 DLEU1O43261 78 aa10.06□□□□□ -0.8
COLCA1-201ENST00000355430 TDGF1P3P51864 188 aa10.06□□□□□ -0.8
COLCA1-201ENST00000355430 RPS20P60866 119 aaKnown RBP10.06□□□□□ -0.8
COLCA1-201ENST00000355430 RNF138Q8WVD3 245 aa10.06□□□□□ -0.8
COLCA1-201ENST00000355430 ZNF257Q9Y2Q1 563 aa10.06□□□□□ -0.8
COLCA1-201ENST00000355430 C7orf71A4D174 169 aa10.05□□□□□ -0.8
COLCA1-201ENST00000355430 C11orf44Q8N8P7 122 aa10.05□□□□□ -0.8
COLCA1-201ENST00000355430 C21orf62Q9NYP8 219 aa10.05□□□□□ -0.8
COLCA1-201ENST00000355430 ZFHX2Q9C0A1 2572 aaPredicted RBP10.05□□□□□ -0.8
COLCA1-201ENST00000355430 MLANAQ16655 118 aa10.05□□□□□ -0.8
COLCA1-201ENST00000355430 ITLN2Q8WWU7 325 aaPredicted RBP10.05□□□□□ -0.8
COLCA1-201ENST00000355430 LY96Q9Y6Y9 160 aa10.05□□□□□ -0.8
COLCA1-201ENST00000355430 CEACAM4O75871 244 aa10.05□□□□□ -0.8
COLCA1-201ENST00000355430 LCN12Q6JVE5 192 aa10.05□□□□□ -0.8
COLCA1-201ENST00000355430 C18orf15Q96N68 181 aa10.05□□□□□ -0.8
COLCA1-201ENST00000355430 ALKBH7Q9BT30 221 aaPredicted RBP10.05□□□□□ -0.8
COLCA1-201ENST00000355430 FGF23Q9GZV9 251 aaPredicted RBP10.05□□□□□ -0.8
COLCA1-201ENST00000355430 OTORQ9NRC9 128 aa10.05□□□□□ -0.8
COLCA1-201ENST00000355430 RPUSD1Q9UJJ7 312 aaKnown RBP10.05□□□□□ -0.8
COLCA1-201ENST00000355430 MYO7BQ6PIF6 2116 aa10.05□□□□□ -0.8
COLCA1-201ENST00000355430 NPFFO15130 113 aa10.05□□□□□ -0.8
COLCA1-201ENST00000355430 ZNF114Q8NC26 417 aa10.05□□□□□ -0.8
COLCA1-201ENST00000355430 NEUROG1Q92886 237 aa10.05□□□□□ -0.8
COLCA1-201ENST00000355430 J3QLI3 93 aa10.04□□□□□ -0.8
COLCA1-201ENST00000355430 IGHV3-11P01762 117 aa10.04□□□□□ -0.8
COLCA1-201ENST00000355430 C3orf79P0CE67 100 aa10.04□□□□□ -0.8
COLCA1-201ENST00000355430 CX3CL1P78423 397 aa10.04□□□□□ -0.8
COLCA1-201ENST00000355430 ZNF414Q96IQ9 312 aa10.04□□□□□ -0.8
COLCA1-201ENST00000355430 PEF1Q9UBV8 284 aaKnown RBP10.04□□□□□ -0.8
COLCA1-201ENST00000355430 SRSF9Q13242 221 aaKnown RBP eCLIP10.04□□□□□ -0.8
COLCA1-201ENST00000355430 DEFB121Q5J5C9 76 aa10.04□□□□□ -0.8
COLCA1-201ENST00000355430 RPRMLQ8N4K4 120 aa10.04□□□□□ -0.8
COLCA1-201ENST00000355430 DKK4Q9UBT3 224 aa10.04□□□□□ -0.8
COLCA1-201ENST00000355430 TECTAO75443 2155 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms