RNA–Protein interactions for RNA: ENST00000355311.9

EBF3-201, Transcript of early B cell factor 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene EBF3, Length 2,993 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EBF3-201ENST00000355311 OR1B1Q8NGR6 318 aa11.13□□□□□ -0.63
EBF3-201ENST00000355311 BET1LQ9NYM9 111 aa11.13□□□□□ -0.63
EBF3-201ENST00000355311 CAMPP49913 170 aa11.13□□□□□ -0.63
EBF3-201ENST00000355311 RPL8P62917 257 aaKnown RBP11.13□□□□□ -0.63
EBF3-201ENST00000355311 UBE2L3P68036 154 aaKnown RBP11.13□□□□□ -0.63
EBF3-201ENST00000355311 TNXAQ16473 311 aa11.13□□□□□ -0.63
EBF3-201ENST00000355311 SPATA12Q7Z6I5 190 aa11.13□□□□□ -0.63
EBF3-201ENST00000355311 MRPL52Q86TS9 123 aaKnown RBP11.13□□□□□ -0.63
EBF3-201ENST00000355311 EAF1Q96JC9 268 aaPredicted RBP11.13□□□□□ -0.63
EBF3-201ENST00000355311 CORTO00230 105 aa11.13□□□□□ -0.63
EBF3-201ENST00000355311 RNASE2P10153 161 aaKnown RBP11.13□□□□□ -0.63
EBF3-201ENST00000355311 PRSS33Q8NF86 280 aa11.13□□□□□ -0.63
EBF3-201ENST00000355311 ZNF355PQ9NSJ1 428 aa11.13□□□□□ -0.63
EBF3-201ENST00000355311 IGHV2-70DA0A0C4DH43 119 aa11.12□□□□□ -0.63
EBF3-201ENST00000355311 A0A1W2PN81 502 aa11.12□□□□□ -0.63
EBF3-201ENST00000355311 H0Y8G0 127 aa11.12□□□□□ -0.63
EBF3-201ENST00000355311 H0YJW9 148 aa11.12□□□□□ -0.63
EBF3-201ENST00000355311 K7EP13 123 aa11.12□□□□□ -0.63
EBF3-201ENST00000355311 ZNF324O75467 553 aaPredicted RBP11.12□□□□□ -0.63
EBF3-201ENST00000355311 CDSNQ15517 529 aa11.12□□□□□ -0.63
EBF3-201ENST00000355311 KLF17Q5JT82 389 aaPredicted RBP11.12□□□□□ -0.63
EBF3-201ENST00000355311 Q8NA96 180 aa11.12□□□□□ -0.63
EBF3-201ENST00000355311 TSKUQ8WUA8 353 aa11.12□□□□□ -0.63
EBF3-201ENST00000355311 CLEC5AQ9NY25 188 aa11.12□□□□□ -0.63
EBF3-201ENST00000355311 FOXA2Q9Y261 457 aaPredicted RBP11.12□□□□□ -0.63
EBF3-201ENST00000355311 USP9YO00507 2555 aaPredicted RBP11.12□□□□□ -0.63
EBF3-201ENST00000355311 IGHV3-35A0A0C4DH35 117 aa11.12□□□□□ -0.63
EBF3-201ENST00000355311 NDUFB3O43676 98 aa11.12□□□□□ -0.63
EBF3-201ENST00000355311 CD99P14209 185 aa11.12□□□□□ -0.63
EBF3-201ENST00000355311 SPOCK3Q9BQ16 436 aa11.12□□□□□ -0.63
EBF3-201ENST00000355311 CST9LQ9H4G1 147 aa11.12□□□□□ -0.63
EBF3-201ENST00000355311 HILPDAQ9Y5L2 63 aa11.12□□□□□ -0.63
EBF3-201ENST00000355311 E7EQL1 145 aa11.11□□□□□ -0.63
EBF3-201ENST00000355311 GOSR1O95249 250 aa11.11□□□□□ -0.63
EBF3-201ENST00000355311 PRCDQ00LT1 54 aa11.11□□□□□ -0.63
EBF3-201ENST00000355311 RPEL1Q2QD12 228 aa11.11□□□□□ -0.63
EBF3-201ENST00000355311 TCTEX1D1Q8N7M0 179 aa11.11□□□□□ -0.63
EBF3-201ENST00000355311 BORCS7Q96B45 105 aa11.11□□□□□ -0.63
EBF3-201ENST00000355311 KCNS1Q96KK3 526 aa11.11□□□□□ -0.63
EBF3-201ENST00000355311 SLC25A33Q9BSK2 321 aa11.11□□□□□ -0.63
EBF3-201ENST00000355311 CREBBPQ92793 2442 aa11.11□□□□□ -0.63
EBF3-201ENST00000355311 BMPR1BO00238 502 aa11.11□□□□□ -0.63
EBF3-201ENST00000355311 SNAI2O43623 268 aa11.11□□□□□ -0.63
EBF3-201ENST00000355311 CEACAM4O75871 244 aa11.11□□□□□ -0.63
EBF3-201ENST00000355311 APOA2P02652 100 aa11.11□□□□□ -0.63
EBF3-201ENST00000355311 ESDP10768 282 aa11.11□□□□□ -0.63
EBF3-201ENST00000355311 TNFRSF1AP19438 455 aa11.11□□□□□ -0.63
EBF3-201ENST00000355311 PRR20EP86478 221 aa11.11□□□□□ -0.63
EBF3-201ENST00000355311 PRR20CP86479 221 aa11.11□□□□□ -0.63
EBF3-201ENST00000355311 PRR20DP86480 221 aa11.11□□□□□ -0.63
EBF3-201ENST00000355311 PRR20BP86481 221 aa11.11□□□□□ -0.63
EBF3-201ENST00000355311 PRR20AP86496 221 aa11.11□□□□□ -0.63
EBF3-201ENST00000355311 SLAQ13239 276 aa11.11□□□□□ -0.63
EBF3-201ENST00000355311 AMMECR1LQ6DCA0 310 aa11.11□□□□□ -0.63
EBF3-201ENST00000355311 ZNF841Q6ZN19 808 aa11.11□□□□□ -0.63
EBF3-201ENST00000355311 SCNM1Q9BWG6 230 aa11.11□□□□□ -0.63
EBF3-201ENST00000355311 PRNDQ9UKY0 176 aa11.11□□□□□ -0.63
EBF3-201ENST00000355311 WASHC3Q9Y3C0 194 aa11.11□□□□□ -0.63
EBF3-201ENST00000355311 FLNCQ14315 2725 aa11.11□□□□□ -0.63
EBF3-201ENST00000355311 CGB1A6NKQ9 187 aa11.1□□□□□ -0.63
EBF3-201ENST00000355311 SAP30O75446 220 aa11.1□□□□□ -0.63
EBF3-201ENST00000355311 TOMM40O96008 361 aa11.1□□□□□ -0.63
EBF3-201ENST00000355311 CFHR2P36980 270 aa11.1□□□□□ -0.63
EBF3-201ENST00000355311 PRRX1P54821 245 aa11.1□□□□□ -0.63
EBF3-201ENST00000355311 EBLN2Q6P2I7 272 aa11.1□□□□□ -0.63
EBF3-201ENST00000355311 OR4F17Q8NGA8 305 aa11.1□□□□□ -0.63
EBF3-201ENST00000355311 SFXN3Q9BWM7 321 aa11.1□□□□□ -0.63
EBF3-201ENST00000355311 V9GYV3 84 aa11.1□□□□□ -0.63
EBF3-201ENST00000355311 TRAV8-1A0A0A6YYK1 113 aa11.1□□□□□ -0.63
EBF3-201ENST00000355311 TMEM178BH3BS89 294 aa11.1□□□□□ -0.63
EBF3-201ENST00000355311 COX7A2P2O60397 106 aa11.1□□□□□ -0.63
EBF3-201ENST00000355311 ERHP84090 104 aaKnown RBP11.1□□□□□ -0.63
EBF3-201ENST00000355311 Q0VG73 95 aa11.1□□□□□ -0.63
EBF3-201ENST00000355311 CLEC2AQ6UVW9 174 aa11.1□□□□□ -0.63
EBF3-201ENST00000355311 PNKDQ8N490 385 aa11.1□□□□□ -0.63
EBF3-201ENST00000355311 MPDU1O75352 247 aa11.1□□□□□ -0.63
EBF3-201ENST00000355311 TCTAP57738 103 aa11.1□□□□□ -0.63
EBF3-201ENST00000355311 FOXE3Q13461 319 aa11.1□□□□□ -0.63
EBF3-201ENST00000355311 OCIAD2Q56VL3 154 aa11.1□□□□□ -0.63
EBF3-201ENST00000355311 OR52E5Q8NH55 327 aa11.1□□□□□ -0.63
EBF3-201ENST00000355311 RNASE6Q93091 150 aaKnown RBP11.1□□□□□ -0.63
EBF3-201ENST00000355311 FBXL15Q9H469 300 aa11.1□□□□□ -0.63
EBF3-201ENST00000355311 FAM208BQ5VWN6 2430 aa11.09□□□□□ -0.63
EBF3-201ENST00000355311 hDV102S1A0JD36 115 aa11.09□□□□□ -0.63
EBF3-201ENST00000355311 NUDT3O95989 172 aa11.09□□□□□ -0.63
EBF3-201ENST00000355311 CA7P43166 264 aa11.09□□□□□ -0.63
EBF3-201ENST00000355311 PLGLAQ15195 96 aa11.09□□□□□ -0.63
EBF3-201ENST00000355311 PATE2Q6UY27 113 aa11.09□□□□□ -0.63
EBF3-201ENST00000355311 TMEM136Q6ZRR5 245 aa11.09□□□□□ -0.63
EBF3-201ENST00000355311 PMCHL2Q9BQD1 86 aa11.09□□□□□ -0.63
EBF3-201ENST00000355311 NAA38Q9BRA0 125 aaKnown RBP11.09□□□□□ -0.63
EBF3-201ENST00000355311 A0A1W2PPI3 338 aa11.09□□□□□ -0.63
EBF3-201ENST00000355311 ISLRO14498 428 aa11.09□□□□□ -0.63
EBF3-201ENST00000355311 IGHV3-23P01764 117 aa11.09□□□□□ -0.63
EBF3-201ENST00000355311 CR1LQ2VPA4 569 aa11.09□□□□□ -0.63
EBF3-201ENST00000355311 LRRC10Q5BKY1 277 aa11.09□□□□□ -0.63
EBF3-201ENST00000355311 LINC00305Q7Z4B0 112 aa11.09□□□□□ -0.63
EBF3-201ENST00000355311 FAM222BQ8WU58 562 aa11.09□□□□□ -0.63
EBF3-201ENST00000355311 MUC21A0A0G2JKD1 596 aa11.08□□□□□ -0.64
EBF3-201ENST00000355311 MUC21A0A140T8X8 626 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms