RNA–Protein interactions for RNA: ENST00000355133.7

SCN8A-202, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 1 (best) BASIC

Gene SCN8A, Length 5,820 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-202ENST00000355133 ADARB2-AS1A8MUL3 147 aa10.87□□□□□ -0.67
SCN8A-202ENST00000355133 RPL35AP18077 110 aaKnown RBP10.87□□□□□ -0.67
SCN8A-202ENST00000355133 RIPPLY3P57055 190 aa10.87□□□□□ -0.67
SCN8A-202ENST00000355133 TMEM95Q3KNT9 176 aa10.87□□□□□ -0.67
SCN8A-202ENST00000355133 GVINP1Q7Z2Y8 2422 aa10.87□□□□□ -0.67
SCN8A-202ENST00000355133 HBDP02042 147 aa10.87□□□□□ -0.67
SCN8A-202ENST00000355133 C20orf204Q6ZNR8 217 aa10.87□□□□□ -0.67
SCN8A-202ENST00000355133 C17orf82Q86X59 251 aaPredicted RBP10.87□□□□□ -0.67
SCN8A-202ENST00000355133 GREB1LQ9C091 1923 aaPredicted RBP10.87□□□□□ -0.67
SCN8A-202ENST00000355133 UBE2DNLQ8IWF7 75 aa10.87□□□□□ -0.67
SCN8A-202ENST00000355133 MDS2Q8NDY4 140 aa10.86□□□□□ -0.67
SCN8A-202ENST00000355133 SPCS1Q9Y6A9 102 aa10.86□□□□□ -0.67
SCN8A-202ENST00000355133 LOC285556D6RIA3 1793 aa10.86□□□□□ -0.67
SCN8A-202ENST00000355133 TRAV2A0A0B4J234 112 aa10.86□□□□□ -0.67
SCN8A-202ENST00000355133 CHTOPQ9Y3Y2 248 aaKnown RBP10.86□□□□□ -0.67
SCN8A-202ENST00000355133 TMEM170AQ8WVE7 144 aa10.86□□□□□ -0.67
SCN8A-202ENST00000355133 SLC25A20O43772 301 aa10.86□□□□□ -0.67
SCN8A-202ENST00000355133 RALGAPA2Q2PPJ7 1873 aa10.86□□□□□ -0.67
SCN8A-202ENST00000355133 ZNF815PA8K554 130 aa10.85□□□□□ -0.67
SCN8A-202ENST00000355133 ZNF688P0C7X2 276 aa10.85□□□□□ -0.67
SCN8A-202ENST00000355133 SRSF7Q16629 238 aaKnown RBP eCLIP10.85□□□□□ -0.67
SCN8A-202ENST00000355133 ZNF329Q86UD4 541 aa10.85□□□□□ -0.67
SCN8A-202ENST00000355133 RNF182Q8N6D2 247 aa10.85□□□□□ -0.67
SCN8A-202ENST00000355133 RCHY1Q96PM5 261 aa10.85□□□□□ -0.67
SCN8A-202ENST00000355133 WNK3Q9BYP7 1800 aa10.85□□□□□ -0.67
SCN8A-202ENST00000355133 COL8A2P25067 703 aa10.85□□□□□ -0.67
SCN8A-202ENST00000355133 GAFA1Q96PS6 74 aa10.85□□□□□ -0.67
SCN8A-202ENST00000355133 SLC25A39Q9BZJ4 359 aaPredicted RBP10.85□□□□□ -0.67
SCN8A-202ENST00000355133 DPM2O94777 84 aa10.85□□□□□ -0.67
SCN8A-202ENST00000355133 GGTLC1Q9BX51 225 aa10.85□□□□□ -0.67
SCN8A-202ENST00000355133 NXT2Q9NPJ8 142 aaKnown RBP10.85□□□□□ -0.67
SCN8A-202ENST00000355133 NYNRINQ9P2P1 1898 aaKnown RBP10.85□□□□□ -0.67
SCN8A-202ENST00000355133 RALGAPA1Q6GYQ0 2036 aa10.85□□□□□ -0.67
SCN8A-202ENST00000355133 C19orf67A6NJJ6 358 aa10.85□□□□□ -0.67
SCN8A-202ENST00000355133 IGHV3-53P01767 116 aa10.85□□□□□ -0.67
SCN8A-202ENST00000355133 MINOS1Q5TGZ0 78 aa10.85□□□□□ -0.67
SCN8A-202ENST00000355133 DTX2Q86UW9 622 aa10.85□□□□□ -0.67
SCN8A-202ENST00000355133 MINOS1-NBL1R4GNA1 71 aa10.85□□□□□ -0.67
SCN8A-202ENST00000355133 MPZP25189 248 aa10.84□□□□□ -0.67
SCN8A-202ENST00000355133 ORMDL2Q53FV1 153 aa10.84□□□□□ -0.67
SCN8A-202ENST00000355133 SLC25A48Q6ZT89 311 aaKnown RBP10.84□□□□□ -0.67
SCN8A-202ENST00000355133 NHP2Q9NX24 153 aaKnown RBP10.84□□□□□ -0.67
SCN8A-202ENST00000355133 H3BUT2 72 aa10.84□□□□□ -0.67
SCN8A-202ENST00000355133 ACTL10Q5JWF8 245 aa10.84□□□□□ -0.67
SCN8A-202ENST00000355133 TSKUQ8WUA8 353 aa10.84□□□□□ -0.67
SCN8A-202ENST00000355133 TMEM8BA6NDV4 472 aa10.84□□□□□ -0.67
SCN8A-202ENST00000355133 PAX2Q02962 417 aa10.84□□□□□ -0.67
SCN8A-202ENST00000355133 FOXL1Q12952 345 aa10.84□□□□□ -0.67
SCN8A-202ENST00000355133 LYPD2Q6UXB3 125 aa10.84□□□□□ -0.67
SCN8A-202ENST00000355133 PNRC2Q9NPJ4 139 aaKnown RBP10.84□□□□□ -0.67
SCN8A-202ENST00000355133 A0A1B0GWJ7 208 aa10.84□□□□□ -0.67
SCN8A-202ENST00000355133 H0YJW9 148 aa10.84□□□□□ -0.67
SCN8A-202ENST00000355133 TEX38Q6PEX7 206 aa10.84□□□□□ -0.67
SCN8A-202ENST00000355133 NIT1Q86X76 327 aa10.84□□□□□ -0.67
SCN8A-202ENST00000355133 F2Z2F3 143 aa10.83□□□□□ -0.67
SCN8A-202ENST00000355133 NCR2O95944 276 aa10.83□□□□□ -0.67
SCN8A-202ENST00000355133 GAS1P54826 345 aa10.83□□□□□ -0.67
SCN8A-202ENST00000355133 IGFL4Q6B9Z1 124 aa10.83□□□□□ -0.67
SCN8A-202ENST00000355133 RNF144BQ7Z419 303 aa10.83□□□□□ -0.67
SCN8A-202ENST00000355133 PIP4P2Q8N4L2 257 aa10.83□□□□□ -0.67
SCN8A-202ENST00000355133 OR5A1Q8NGJ0 315 aa10.83□□□□□ -0.67
SCN8A-202ENST00000355133 BUB1B-PAK6H3BSN5 160 aa10.83□□□□□ -0.68
SCN8A-202ENST00000355133 CRIM1Q9NZV1 1036 aa10.83□□□□□ -0.68
SCN8A-202ENST00000355133 GREB1Q4ZG55 1949 aa10.83□□□□□ -0.68
SCN8A-202ENST00000355133 ARHGEF17Q96PE2 2063 aaPredicted RBP10.83□□□□□ -0.68
SCN8A-202ENST00000355133 TRGV1A0A0A0MS02 117 aa10.83□□□□□ -0.68
SCN8A-202ENST00000355133 LINC00205P59089 165 aa10.83□□□□□ -0.68
SCN8A-202ENST00000355133 HGFACQ04756 655 aa10.83□□□□□ -0.68
SCN8A-202ENST00000355133 CD300EQ496F6 205 aaPredicted RBP10.83□□□□□ -0.68
SCN8A-202ENST00000355133 PRADC1Q9BSG0 188 aa10.83□□□□□ -0.68
SCN8A-202ENST00000355133 FCN3O75636 299 aa10.83□□□□□ -0.68
SCN8A-202ENST00000355133 PPBPP02775 128 aa10.83□□□□□ -0.68
SCN8A-202ENST00000355133 C5orf64Q2M2E5 130 aa10.83□□□□□ -0.68
SCN8A-202ENST00000355133 LCNL1Q6ZST4 164 aa10.83□□□□□ -0.68
SCN8A-202ENST00000355133 MGST2Q99735 147 aa10.83□□□□□ -0.68
SCN8A-202ENST00000355133 LCTP09848 1927 aa10.83□□□□□ -0.68
SCN8A-202ENST00000355133 KLHL30-AS1Q8NEE0 82 aa10.82□□□□□ -0.68
SCN8A-202ENST00000355133 A0A087WX48 190 aa10.82□□□□□ -0.68
SCN8A-202ENST00000355133 MBD3L4A6NDZ8 208 aaPredicted RBP10.82□□□□□ -0.68
SCN8A-202ENST00000355133 MBD3L3A6NE82 208 aaPredicted RBP10.82□□□□□ -0.68
SCN8A-202ENST00000355133 MBD3L5A6NJ08 208 aaPredicted RBP10.82□□□□□ -0.68
SCN8A-202ENST00000355133 SRRM4A7MD48 611 aaKnown RBP10.82□□□□□ -0.68
SCN8A-202ENST00000355133 IGKCP01834 107 aa10.82□□□□□ -0.68
SCN8A-202ENST00000355133 LINC00158P58513 81 aa10.82□□□□□ -0.68
SCN8A-202ENST00000355133 FAM169BQ8N8A8 192 aa10.82□□□□□ -0.68
SCN8A-202ENST00000355133 MBD3L2Q8NHZ7 208 aaPredicted RBP10.82□□□□□ -0.68
SCN8A-202ENST00000355133 BPESC1Q9GZL8 116 aa10.82□□□□□ -0.68
SCN8A-202ENST00000355133 INTS1Q8N201 2190 aaKnown RBP10.82□□□□□ -0.68
SCN8A-202ENST00000355133 IGKV1-5P01602 117 aa10.82□□□□□ -0.68
SCN8A-202ENST00000355133 ZNF581Q9P0T4 197 aa10.82□□□□□ -0.68
SCN8A-202ENST00000355133 ZNF474Q6S9Z5 364 aaPredicted RBP10.82□□□□□ -0.68
SCN8A-202ENST00000355133 MBD3L1Q8WWY6 194 aa10.82□□□□□ -0.68
SCN8A-202ENST00000355133 CEP250Q9BV73 2442 aa10.82□□□□□ -0.68
SCN8A-202ENST00000355133 M0R1W7 72 aa10.82□□□□□ -0.68
SCN8A-202ENST00000355133 B3GALT5-AS1P59052 145 aa10.82□□□□□ -0.68
SCN8A-202ENST00000355133 NPC2P61916 151 aa10.82□□□□□ -0.68
SCN8A-202ENST00000355133 DMRTA1Q5VZB9 504 aa10.82□□□□□ -0.68
SCN8A-202ENST00000355133 UBE2E2Q96LR5 201 aa10.82□□□□□ -0.68
SCN8A-202ENST00000355133 GNB1LQ9BYB4 327 aa10.82□□□□□ -0.68
SCN8A-202ENST00000355133 SCN5AQ14524 2016 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms