RNA–Protein interactions for RNA: ENST00000354433.7

CDRT1-202, CMT1A duplicated region transcript 1, humanhuman

TSL 2 BASIC

Gene CDRT1, Length 1,557 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-202ENST00000354433 PRR25Q96S07 402 aa8.91□□□□□ -0.98
CDRT1-202ENST00000354433 SCRT1Q9BWW7 348 aa8.91□□□□□ -0.98
CDRT1-202ENST00000354433 ZNF355PQ9NSJ1 428 aa8.91□□□□□ -0.98
CDRT1-202ENST00000354433 SMCO3A2RU48 225 aa8.9□□□□□ -0.98
CDRT1-202ENST00000354433 CORTO00230 105 aa8.9□□□□□ -0.98
CDRT1-202ENST00000354433 OR13C7P0DN81 318 aa8.9□□□□□ -0.98
CDRT1-202ENST00000354433 GUK1Q16774 197 aa8.9□□□□□ -0.98
CDRT1-202ENST00000354433 FFAR4Q5NUL3 377 aa8.9□□□□□ -0.98
CDRT1-202ENST00000354433 ACSM6Q6P461 480 aa8.9□□□□□ -0.98
CDRT1-202ENST00000354433 SFT2D1Q8WV19 159 aa8.9□□□□□ -0.98
CDRT1-202ENST00000354433 MGST2Q99735 147 aa8.9□□□□□ -0.98
CDRT1-202ENST00000354433 TREM1Q9NP99 234 aa8.9□□□□□ -0.98
CDRT1-202ENST00000354433 CTXND1A0A1B0GTU2 59 aa8.9□□□□□ -0.99
CDRT1-202ENST00000354433 LINC01619G3V211 115 aa8.9□□□□□ -0.99
CDRT1-202ENST00000354433 CYB5BO43169 146 aa8.9□□□□□ -0.99
CDRT1-202ENST00000354433 SAP30O75446 220 aa8.9□□□□□ -0.99
CDRT1-202ENST00000354433 LGALS1P09382 135 aaKnown RBP8.9□□□□□ -0.99
CDRT1-202ENST00000354433 M6PRP20645 277 aa8.9□□□□□ -0.99
CDRT1-202ENST00000354433 RPL29P47914 159 aaKnown RBP8.9□□□□□ -0.99
CDRT1-202ENST00000354433 CRIP2P52943 208 aaPredicted RBP8.9□□□□□ -0.99
CDRT1-202ENST00000354433 SLURP1P55000 103 aa8.9□□□□□ -0.99
CDRT1-202ENST00000354433 AKR1C1Q04828 323 aa8.9□□□□□ -0.99
CDRT1-202ENST00000354433 FXYD3Q14802 87 aa8.9□□□□□ -0.99
CDRT1-202ENST00000354433 C10orf55Q5SWW7 151 aa8.9□□□□□ -0.99
CDRT1-202ENST00000354433 ASPHD1Q5U4P2 390 aa8.9□□□□□ -0.99
CDRT1-202ENST00000354433 ETFRF1Q6IPR1 90 aa8.9□□□□□ -0.99
CDRT1-202ENST00000354433 ZNF562Q6V9R5 426 aa8.9□□□□□ -0.99
CDRT1-202ENST00000354433 NARS2Q96I59 477 aaKnown RBP8.9□□□□□ -0.99
CDRT1-202ENST00000354433 B9D2Q9BPU9 175 aa8.9□□□□□ -0.99
CDRT1-202ENST00000354433 GGTLC1Q9BX51 225 aa8.9□□□□□ -0.99
CDRT1-202ENST00000354433 SEC11CQ9BY50 192 aa8.9□□□□□ -0.99
CDRT1-202ENST00000354433 ACTR3CQ9C0K3 210 aaPredicted RBP8.9□□□□□ -0.99
CDRT1-202ENST00000354433 VSIRQ9H7M9 311 aa8.9□□□□□ -0.99
CDRT1-202ENST00000354433 CARHSP1Q9Y2V2 147 aaKnown RBP8.9□□□□□ -0.99
CDRT1-202ENST00000354433 IGHV4OR15-8A0A075B7B6 117 aa8.89□□□□□ -0.99
CDRT1-202ENST00000354433 A0A087WW49 117 aa8.89□□□□□ -0.99
CDRT1-202ENST00000354433 OVOL1O14753 267 aa8.89□□□□□ -0.99
CDRT1-202ENST00000354433 AGPAT2O15120 278 aa8.89□□□□□ -0.99
CDRT1-202ENST00000354433 TRGV3P03979 118 aa8.89□□□□□ -0.99
CDRT1-202ENST00000354433 ELLP55199 621 aaPredicted RBP8.89□□□□□ -0.99
CDRT1-202ENST00000354433 SRSF3P84103 164 aaKnown RBP8.89□□□□□ -0.99
CDRT1-202ENST00000354433 KIAA0141Q14154 515 aaPredicted RBP8.89□□□□□ -0.99
CDRT1-202ENST00000354433 ZNF726P1Q15940 193 aa8.89□□□□□ -0.99
CDRT1-202ENST00000354433 AKIRIN2Q53H80 203 aa8.89□□□□□ -0.99
CDRT1-202ENST00000354433 SLC16A13Q7RTY0 426 aa8.89□□□□□ -0.99
CDRT1-202ENST00000354433 RPP25LQ8N5L8 163 aaKnown RBP8.89□□□□□ -0.99
CDRT1-202ENST00000354433 OR10G4Q8NGN3 311 aa8.89□□□□□ -0.99
CDRT1-202ENST00000354433 OR10G9Q8NGN4 311 aa8.89□□□□□ -0.99
CDRT1-202ENST00000354433 OR10G7Q8NGN6 311 aa8.89□□□□□ -0.99
CDRT1-202ENST00000354433 OR1L6Q8NGR2 347 aa8.89□□□□□ -0.99
CDRT1-202ENST00000354433 OR1P1Q8NH06 330 aa8.89□□□□□ -0.99
CDRT1-202ENST00000354433 SRSF12Q8WXF0 261 aaKnown RBP8.89□□□□□ -0.99
CDRT1-202ENST00000354433 SLC35E1Q96K37 410 aa8.89□□□□□ -0.99
CDRT1-202ENST00000354433 SLC39A9Q9NUM3 307 aa8.89□□□□□ -0.99
CDRT1-202ENST00000354433 ZNF256Q9Y2P7 627 aaPredicted RBP8.89□□□□□ -0.99
CDRT1-202ENST00000354433 MAP1LC3B2A6NCE7 125 aa8.88□□□□□ -0.99
CDRT1-202ENST00000354433 RBFOX3A6NFN3 312 aa8.88□□□□□ -0.99
CDRT1-202ENST00000354433 TEX22C9J3V5 150 aa8.88□□□□□ -0.99
CDRT1-202ENST00000354433 NDUFS6O75380 124 aaKnown RBP8.88□□□□□ -0.99
CDRT1-202ENST00000354433 EGR2P11161 476 aaPredicted RBP8.88□□□□□ -0.99
CDRT1-202ENST00000354433 TAGLN2P37802 199 aaKnown RBP8.88□□□□□ -0.99
CDRT1-202ENST00000354433 INSL3P51460 131 aa8.88□□□□□ -0.99
CDRT1-202ENST00000354433 SSBP2P81877 361 aaPredicted RBP8.88□□□□□ -0.99
CDRT1-202ENST00000354433 GAMTQ14353 236 aa8.88□□□□□ -0.99
CDRT1-202ENST00000354433 C19orf54Q5BKX5 351 aa8.88□□□□□ -0.99
CDRT1-202ENST00000354433 MAP1LC3BQ9GZQ8 125 aa8.88□□□□□ -0.99
CDRT1-202ENST00000354433 EIF5A2Q9GZV4 153 aaKnown RBP8.88□□□□□ -0.99
CDRT1-202ENST00000354433 PXMP4Q9Y6I8 212 aa8.88□□□□□ -0.99
CDRT1-202ENST00000354433 IFNA1P01562 189 aa8.87□□□□□ -0.99
CDRT1-202ENST00000354433 CRYGCP07315 174 aa8.87□□□□□ -0.99
CDRT1-202ENST00000354433 CCL20P78556 96 aa8.87□□□□□ -0.99
CDRT1-202ENST00000354433 PRR20EP86478 221 aa8.87□□□□□ -0.99
CDRT1-202ENST00000354433 PRR20CP86479 221 aa8.87□□□□□ -0.99
CDRT1-202ENST00000354433 PRR20DP86480 221 aa8.87□□□□□ -0.99
CDRT1-202ENST00000354433 PRR20BP86481 221 aa8.87□□□□□ -0.99
CDRT1-202ENST00000354433 PRR20AP86496 221 aa8.87□□□□□ -0.99
CDRT1-202ENST00000354433 KHDC3LQ587J8 217 aa8.87□□□□□ -0.99
CDRT1-202ENST00000354433 ZNF506Q5JVG8 444 aa8.87□□□□□ -0.99
CDRT1-202ENST00000354433 DLX4Q92988 240 aaPredicted RBP8.87□□□□□ -0.99
CDRT1-202ENST00000354433 TMEM231Q9H6L2 316 aa8.87□□□□□ -0.99
CDRT1-202ENST00000354433 SLC45A2Q9UMX9 530 aa8.87□□□□□ -0.99
CDRT1-202ENST00000354433 F11RQ9Y624 299 aaKnown RBP8.87□□□□□ -0.99
CDRT1-202ENST00000354433 F8W036 122 aa8.86□□□□□ -0.99
CDRT1-202ENST00000354433 YIF1AO95070 293 aa8.86□□□□□ -0.99
CDRT1-202ENST00000354433 APOC3P02656 99 aa8.86□□□□□ -0.99
CDRT1-202ENST00000354433 SFTA3P0C7M3 94 aa8.86□□□□□ -0.99
CDRT1-202ENST00000354433 APELAP0DMC3 54 aa8.86□□□□□ -0.99
CDRT1-202ENST00000354433 CDC34P49427 236 aaPredicted RBP8.86□□□□□ -0.99
CDRT1-202ENST00000354433 PPT1P50897 306 aa8.86□□□□□ -0.99
CDRT1-202ENST00000354433 LCN15Q6UWW0 184 aa8.86□□□□□ -0.99
CDRT1-202ENST00000354433 THAP8Q8NA92 274 aa8.86□□□□□ -0.99
CDRT1-202ENST00000354433 OR5T1Q8NG75 326 aa8.86□□□□□ -0.99
CDRT1-202ENST00000354433 SLC35B3Q9H1N7 401 aa8.86□□□□□ -0.99
CDRT1-202ENST00000354433 LOC102723971A0A1B0GUV8 181 aa8.86□□□□□ -0.99
CDRT1-202ENST00000354433 HSPB1P04792 205 aaKnown RBP8.86□□□□□ -0.99
CDRT1-202ENST00000354433 AREGP15514 252 aa8.86□□□□□ -0.99
CDRT1-202ENST00000354433 ADCYAP1P18509 176 aa8.86□□□□□ -0.99
CDRT1-202ENST00000354433 B2MP61769 119 aa8.86□□□□□ -0.99
CDRT1-202ENST00000354433 LCE2DQ5TA82 110 aaPredicted RBP8.86□□□□□ -0.99
CDRT1-202ENST00000354433 MIC13Q5XKP0 118 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms