RNA–Protein interactions for RNA: ENST00000351205.8

SMN1-201, Transcript of survival of motor neuron 1, telomeric, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMN1, Length 900 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-201ENST00000351205 MRPS26Q9BYN8 205 aaKnown RBP12.16□□□□□ -0.46
SMN1-201ENST00000351205 KRTAP17-1Q9BYP8 105 aa12.16□□□□□ -0.46
SMN1-201ENST00000351205 SEPSECSQ9HD40 501 aaKnown RBP12.16□□□□□ -0.46
SMN1-201ENST00000351205 CACFD1Q9UGQ2 172 aa12.16□□□□□ -0.46
SMN1-201ENST00000351205 ANKRD20A5PA0PJZ0 165 aa12.15□□□□□ -0.46
SMN1-201ENST00000351205 H3BMM0 161 aa12.15□□□□□ -0.46
SMN1-201ENST00000351205 ZNF767PQ75MW2 155 aa12.15□□□□□ -0.46
SMN1-201ENST00000351205 OR51G1Q8NGK1 321 aa12.15□□□□□ -0.46
SMN1-201ENST00000351205 RNF125Q96EQ8 232 aa12.15□□□□□ -0.46
SMN1-201ENST00000351205 XCL2Q9UBD3 114 aa12.15□□□□□ -0.46
SMN1-201ENST00000351205 HSPB7Q9UBY9 170 aa12.15□□□□□ -0.46
SMN1-201ENST00000351205 KCNIP3Q9Y2W7 256 aa12.15□□□□□ -0.46
SMN1-201ENST00000351205 U3KQ87 197 aa12.15□□□□□ -0.46
SMN1-201ENST00000351205 DNAH17Q9UFH2 4485 aa12.14□□□□□ -0.47
SMN1-201ENST00000351205 CCR6P51684 374 aa12.14□□□□□ -0.47
SMN1-201ENST00000351205 NUTF2P61970 127 aaKnown RBP12.14□□□□□ -0.47
SMN1-201ENST00000351205 C12orf74Q32Q52 190 aa12.14□□□□□ -0.47
SMN1-201ENST00000351205 LYZL2Q7Z4W2 148 aa12.14□□□□□ -0.47
SMN1-201ENST00000351205 LGI3Q8N145 548 aa12.14□□□□□ -0.47
SMN1-201ENST00000351205 DTD1Q8TEA8 209 aa12.14□□□□□ -0.47
SMN1-201ENST00000351205 C1QTNF4Q9BXJ3 329 aa12.14□□□□□ -0.47
SMN1-201ENST00000351205 RBKSQ9H477 322 aa12.14□□□□□ -0.47
SMN1-201ENST00000351205 RABL2AQ9UBK7 228 aaPredicted RBP12.14□□□□□ -0.47
SMN1-201ENST00000351205 SCP2D1Q9UJQ7 156 aa12.14□□□□□ -0.47
SMN1-201ENST00000351205 RABL2BQ9UNT1 228 aa12.14□□□□□ -0.47
SMN1-201ENST00000351205 KIAA1109Q2LD37 5005 aa12.14□□□□□ -0.47
SMN1-201ENST00000351205 PKHD1P08F94 4074 aa12.13□□□□□ -0.47
SMN1-201ENST00000351205 A0A0B4J2A0 478 aa12.13□□□□□ -0.47
SMN1-201ENST00000351205 HLA-DRB4P13762 266 aa12.13□□□□□ -0.47
SMN1-201ENST00000351205 AKR1C4P17516 323 aa12.13□□□□□ -0.47
SMN1-201ENST00000351205 SUPT4H1P63272 117 aaKnown RBP12.13□□□□□ -0.47
SMN1-201ENST00000351205 KLF9Q13886 244 aaPredicted RBP12.13□□□□□ -0.47
SMN1-201ENST00000351205 SMCO1Q147U7 214 aa12.13□□□□□ -0.47
SMN1-201ENST00000351205 DYNC2LI1Q8TCX1 351 aa12.13□□□□□ -0.47
SMN1-201ENST00000351205 RNF126Q9BV68 326 aa12.13□□□□□ -0.47
SMN1-201ENST00000351205 PBDC1Q9BVG4 233 aa12.13□□□□□ -0.47
SMN1-201ENST00000351205 MCUBQ9NWR8 336 aa12.13□□□□□ -0.47
SMN1-201ENST00000351205 CCDC59Q9P031 241 aaKnown RBP12.13□□□□□ -0.47
SMN1-201ENST00000351205 SHPKQ9UHJ6 478 aa12.13□□□□□ -0.47
SMN1-201ENST00000351205 HLA-DRB4X5D2U9 266 aa12.13□□□□□ -0.47
SMN1-201ENST00000351205 DEFB131BA0A096LNP1 70 aa12.12□□□□□ -0.47
SMN1-201ENST00000351205 DEFB1P60022 68 aa12.12□□□□□ -0.47
SMN1-201ENST00000351205 ZNF90Q03938 601 aa12.12□□□□□ -0.47
SMN1-201ENST00000351205 GDF5OSQ5U4N7 250 aa12.12□□□□□ -0.47
SMN1-201ENST00000351205 SCGB3A2Q96PL1 93 aa12.12□□□□□ -0.47
SMN1-201ENST00000351205 IGKV1D-37A0A075B6S9 117 aa12.11□□□□□ -0.47
SMN1-201ENST00000351205 ZFP92A6NM28 416 aa12.11□□□□□ -0.47
SMN1-201ENST00000351205 AMBPP02760 352 aa12.11□□□□□ -0.47
SMN1-201ENST00000351205 NUP62P37198 522 aaPredicted RBP12.11□□□□□ -0.47
SMN1-201ENST00000351205 NKX2-1P43699 371 aaPredicted RBP12.11□□□□□ -0.47
SMN1-201ENST00000351205 GAMTQ14353 236 aa12.11□□□□□ -0.47
SMN1-201ENST00000351205 OR8G2PQ6IF36 304 aa12.11□□□□□ -0.47
SMN1-201ENST00000351205 RAB2BQ8WUD1 216 aa12.11□□□□□ -0.47
SMN1-201ENST00000351205 SCRT1Q9BWW7 348 aa12.11□□□□□ -0.47
SMN1-201ENST00000351205 WDR12Q9GZL7 423 aaKnown RBP12.11□□□□□ -0.47
SMN1-201ENST00000351205 ANXA3P12429 323 aa12.1□□□□□ -0.47
SMN1-201ENST00000351205 GPX4P36969 197 aaPredicted RBP12.1□□□□□ -0.47
SMN1-201ENST00000351205 ZNF705AQ6ZN79 300 aaPredicted RBP12.1□□□□□ -0.47
SMN1-201ENST00000351205 OR1S1Q8NH92 325 aa12.1□□□□□ -0.47
SMN1-201ENST00000351205 SLC35E1Q96K37 410 aa12.1□□□□□ -0.47
SMN1-201ENST00000351205 RSL24D1Q9UHA3 163 aaKnown RBP12.1□□□□□ -0.47
SMN1-201ENST00000351205 IGKV3-20P01619 116 aa12.09□□□□□ -0.47
SMN1-201ENST00000351205 ATP5IP56385 69 aaPredicted RBP12.09□□□□□ -0.47
SMN1-201ENST00000351205 FXYD7P58549 80 aa12.09□□□□□ -0.47
SMN1-201ENST00000351205 LYZP61626 148 aa12.09□□□□□ -0.47
SMN1-201ENST00000351205 SRPXP78539 464 aa12.09□□□□□ -0.47
SMN1-201ENST00000351205 GSG1LQ6UXU4 331 aa12.09□□□□□ -0.47
SMN1-201ENST00000351205 LINC00052Q96N35 136 aa12.09□□□□□ -0.47
SMN1-201ENST00000351205 SAV1Q9H4B6 383 aaPredicted RBP12.09□□□□□ -0.47
SMN1-201ENST00000351205 PFDN2Q9UHV9 154 aa12.09□□□□□ -0.47
SMN1-201ENST00000351205 ZNF705FA8MVS1 300 aaPredicted RBP12.08□□□□□ -0.48
SMN1-201ENST00000351205 ZNF705DP0CH99 300 aaPredicted RBP12.08□□□□□ -0.48
SMN1-201ENST00000351205 ZNF705BP0CI00 300 aaPredicted RBP12.08□□□□□ -0.48
SMN1-201ENST00000351205 PSMB3P49720 205 aa12.08□□□□□ -0.48
SMN1-201ENST00000351205 TMBIM6P55061 237 aa12.08□□□□□ -0.48
SMN1-201ENST00000351205 FOXI2Q6ZQN5 318 aa12.08□□□□□ -0.48
SMN1-201ENST00000351205 NEU1Q99519 415 aa12.08□□□□□ -0.48
SMN1-201ENST00000351205 SOSTQ9BQB4 213 aa12.08□□□□□ -0.48
SMN1-201ENST00000351205 BCL7BQ9BQE9 202 aa12.08□□□□□ -0.48
SMN1-201ENST00000351205 SLIRPQ9GZT3 109 aaKnown RBP12.08□□□□□ -0.48
SMN1-201ENST00000351205 IGHV3OR16-12A0A075B7B8 117 aa12.07□□□□□ -0.48
SMN1-201ENST00000351205 FABP12A6NFH5 140 aa12.07□□□□□ -0.48
SMN1-201ENST00000351205 SOCS3O14543 225 aa12.07□□□□□ -0.48
SMN1-201ENST00000351205 PITX3O75364 302 aa12.07□□□□□ -0.48
SMN1-201ENST00000351205 TNFSF8P32971 234 aa12.07□□□□□ -0.48
SMN1-201ENST00000351205 ID1P41134 155 aa12.07□□□□□ -0.48
SMN1-201ENST00000351205 EMP1P54849 157 aa12.07□□□□□ -0.48
SMN1-201ENST00000351205 OR2F1Q13607 317 aa12.07□□□□□ -0.48
SMN1-201ENST00000351205 C1orf194Q5T5A4 169 aa12.07□□□□□ -0.48
SMN1-201ENST00000351205 ZNF709Q8N972 641 aa12.07□□□□□ -0.48
SMN1-201ENST00000351205 COQ8AQ8NI60 647 aa12.07□□□□□ -0.48
SMN1-201ENST00000351205 NDUFAF3Q9BU61 184 aa12.07□□□□□ -0.48
SMN1-201ENST00000351205 DYNC1H1Q14204 4646 aaKnown RBP12.06□□□□□ -0.48
SMN1-201ENST00000351205 PKD1P98161 4303 aa12.06□□□□□ -0.48
SMN1-201ENST00000351205 IGKV1OR2-108A0A075B7D4 117 aa12.06□□□□□ -0.48
SMN1-201ENST00000351205 SNRPGP15A8MWD9 76 aa12.06□□□□□ -0.48
SMN1-201ENST00000351205 FABP1P07148 127 aa12.06□□□□□ -0.48
SMN1-201ENST00000351205 IAPPP10997 89 aa12.06□□□□□ -0.48
SMN1-201ENST00000351205 TMED4Q7Z7H5 227 aa12.06□□□□□ -0.48
SMN1-201ENST00000351205 POM121L12Q8N7R1 296 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 81.6 ms