RNA–Protein interactions for RNA: ENST00000349748.7

CAPN3-203, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 2,955 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-203ENST00000349748 PTPRZ1P23471 2315 aaPredicted RBP8.66□□□□□ -1.02
CAPN3-203ENST00000349748 IGHV3-20A0A0C4DH32 117 aa8.66□□□□□ -1.02
CAPN3-203ENST00000349748 LINC01548A6NM66 108 aa8.66□□□□□ -1.02
CAPN3-203ENST00000349748 NPIPB6E9PJ23 425 aa8.66□□□□□ -1.02
CAPN3-203ENST00000349748 ABHD17BQ5VST6 288 aa8.66□□□□□ -1.02
CAPN3-203ENST00000349748 RAX2Q96IS3 184 aa8.66□□□□□ -1.02
CAPN3-203ENST00000349748 RAB1BQ9H0U4 201 aa8.66□□□□□ -1.02
CAPN3-203ENST00000349748 FAM90A10PA6NDY2 464 aa8.65□□□□□ -1.02
CAPN3-203ENST00000349748 FAM90A18PA6NE21 464 aa8.65□□□□□ -1.02
CAPN3-203ENST00000349748 FAM90A16PA6NEW6 464 aa8.65□□□□□ -1.02
CAPN3-203ENST00000349748 FAM90A20PA6NIJ5 464 aa8.65□□□□□ -1.02
CAPN3-203ENST00000349748 FAM90A8PA6NJQ4 464 aa8.65□□□□□ -1.02
CAPN3-203ENST00000349748 FAM90A7PA6NKC0 464 aa8.65□□□□□ -1.02
CAPN3-203ENST00000349748 FAM90A22PA8MWA6 464 aa8.65□□□□□ -1.02
CAPN3-203ENST00000349748 FAM90A12PA8MX19 464 aa8.65□□□□□ -1.02
CAPN3-203ENST00000349748 FAM90A5PA8MXJ8 464 aa8.65□□□□□ -1.02
CAPN3-203ENST00000349748 FAM90A23PA8MXZ1 464 aa8.65□□□□□ -1.02
CAPN3-203ENST00000349748 SYNGR3O43761 229 aa8.65□□□□□ -1.02
CAPN3-203ENST00000349748 FAM90A15PP0C7V4 464 aa8.65□□□□□ -1.02
CAPN3-203ENST00000349748 FAM90A13PP0C7W8 464 aa8.65□□□□□ -1.02
CAPN3-203ENST00000349748 FAM90A14PP0C7W9 464 aa8.65□□□□□ -1.02
CAPN3-203ENST00000349748 FAM90A24PP0C7X0 464 aa8.65□□□□□ -1.02
CAPN3-203ENST00000349748 CSN1S1P47710 185 aa8.65□□□□□ -1.02
CAPN3-203ENST00000349748 NXPH1P58417 271 aa8.65□□□□□ -1.02
CAPN3-203ENST00000349748 ATP5L2Q7Z4Y8 100 aa8.65□□□□□ -1.02
CAPN3-203ENST00000349748 IGKV3D-11A0A0A0MRZ8 115 aa8.65□□□□□ -1.02
CAPN3-203ENST00000349748 RBP4P02753 201 aa8.65□□□□□ -1.02
CAPN3-203ENST00000349748 DSCR4P56555 118 aaPredicted RBP8.65□□□□□ -1.02
CAPN3-203ENST00000349748 PMS2CLQ68D20 193 aa8.65□□□□□ -1.02
CAPN3-203ENST00000349748 CHAC1Q9BUX1 264 aa8.65□□□□□ -1.02
CAPN3-203ENST00000349748 TMEM167BQ9NRX6 74 aa8.65□□□□□ -1.02
CAPN3-203ENST00000349748 TANC2Q9HCD6 1990 aa8.65□□□□□ -1.03
CAPN3-203ENST00000349748 IGKV2D-26A0A0A0MRZ7 120 aa8.64□□□□□ -1.03
CAPN3-203ENST00000349748 B4GALT1P15291 398 aa8.64□□□□□ -1.03
CAPN3-203ENST00000349748 SMCPP49901 116 aaPredicted RBP8.64□□□□□ -1.03
CAPN3-203ENST00000349748 C3orf56Q8N813 242 aa8.64□□□□□ -1.03
CAPN3-203ENST00000349748 ZNF436-AS1Q8NC38 126 aaPredicted RBP8.64□□□□□ -1.03
CAPN3-203ENST00000349748 B9A039 149 aa8.64□□□□□ -1.03
CAPN3-203ENST00000349748 FAM231DQ6ZW35 169 aa8.64□□□□□ -1.03
CAPN3-203ENST00000349748 WFDC3Q8IUB2 231 aa8.64□□□□□ -1.03
CAPN3-203ENST00000349748 Q8TCH9 128 aa8.64□□□□□ -1.03
CAPN3-203ENST00000349748 PRSS46E5RG02 174 aa8.64□□□□□ -1.03
CAPN3-203ENST00000349748 ZNF32P17041 273 aa8.64□□□□□ -1.03
CAPN3-203ENST00000349748 CHCHD2P9Q5T1J5 151 aaPredicted RBP8.64□□□□□ -1.03
CAPN3-203ENST00000349748 LINC00322Q6ZN03 302 aaPredicted RBP8.64□□□□□ -1.03
CAPN3-203ENST00000349748 DLL3Q9NYJ7 618 aa8.64□□□□□ -1.03
CAPN3-203ENST00000349748 KLRF1Q9NZS2 232 aa8.64□□□□□ -1.03
CAPN3-203ENST00000349748 NCKAP5O14513 1909 aa8.63□□□□□ -1.03
CAPN3-203ENST00000349748 A0A096LNJ9 63 aa8.63□□□□□ -1.03
CAPN3-203ENST00000349748 C10orf142B7Z368 130 aa8.63□□□□□ -1.03
CAPN3-203ENST00000349748 AJUBAQ96IF1 538 aa8.63□□□□□ -1.03
CAPN3-203ENST00000349748 POLDIP2Q9Y2S7 368 aa8.63□□□□□ -1.03
CAPN3-203ENST00000349748 ZFHX2Q9C0A1 2572 aaPredicted RBP8.63□□□□□ -1.03
CAPN3-203ENST00000349748 CACNA1EQ15878 2313 aa8.63□□□□□ -1.03
CAPN3-203ENST00000349748 PI4KAP42356 2102 aa8.63□□□□□ -1.03
CAPN3-203ENST00000349748 C10orf128Q5T292 105 aa8.63□□□□□ -1.03
CAPN3-203ENST00000349748 MKXQ8IYA7 352 aa8.63□□□□□ -1.03
CAPN3-203ENST00000349748 VKORC1L1Q8N0U8 176 aa8.63□□□□□ -1.03
CAPN3-203ENST00000349748 UCN2Q96RP3 112 aa8.63□□□□□ -1.03
CAPN3-203ENST00000349748 DKK2Q9UBU2 259 aa8.63□□□□□ -1.03
CAPN3-203ENST00000349748 TCF19Q9Y242 345 aa8.63□□□□□ -1.03
CAPN3-203ENST00000349748 AMMECR1Q9Y4X0 333 aaPredicted RBP8.63□□□□□ -1.03
CAPN3-203ENST00000349748 LOC389332A0A1B0GUA5 103 aa8.62□□□□□ -1.03
CAPN3-203ENST00000349748 FAM90A9PA6NNJ1 464 aa8.62□□□□□ -1.03
CAPN3-203ENST00000349748 CT45A10P0DMU9 189 aa8.62□□□□□ -1.03
CAPN3-203ENST00000349748 NDUFV3P56181 108 aaKnown RBP8.62□□□□□ -1.03
CAPN3-203ENST00000349748 SLC25A45Q8N413 288 aa8.62□□□□□ -1.03
CAPN3-203ENST00000349748 PRSS3P2Q8NHM4 247 aa8.62□□□□□ -1.03
CAPN3-203ENST00000349748 NABP2Q9BQ15 211 aa8.62□□□□□ -1.03
CAPN3-203ENST00000349748 FZR1Q9UM11 496 aa8.62□□□□□ -1.03
CAPN3-203ENST00000349748 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP8.62□□□□□ -1.03
CAPN3-203ENST00000349748 NPIPB11E5RHQ5 1161 aa8.62□□□□□ -1.03
CAPN3-203ENST00000349748 SLC25A5P05141 298 aaKnown RBP8.62□□□□□ -1.03
CAPN3-203ENST00000349748 ERVK11-1P61568 191 aa8.62□□□□□ -1.03
CAPN3-203ENST00000349748 GNG5P63218 68 aa8.62□□□□□ -1.03
CAPN3-203ENST00000349748 ALKBH6Q3KRA9 238 aa8.62□□□□□ -1.03
CAPN3-203ENST00000349748 SFTA2Q6UW10 78 aa8.62□□□□□ -1.03
CAPN3-203ENST00000349748 MOB3BQ86TA1 216 aa8.62□□□□□ -1.03
CAPN3-203ENST00000349748 CEND1Q8N111 149 aa8.62□□□□□ -1.03
CAPN3-203ENST00000349748 ZNF441Q8N8Z8 693 aa8.62□□□□□ -1.03
CAPN3-203ENST00000349748 OR5AN1Q8NGI8 311 aa8.62□□□□□ -1.03
CAPN3-203ENST00000349748 ARRDC1-AS1Q9H2J1 176 aa8.62□□□□□ -1.03
CAPN3-203ENST00000349748 ZNF318Q5VUA4 2279 aa8.62□□□□□ -1.03
CAPN3-203ENST00000349748 LINC00473A8K010 186 aa8.61□□□□□ -1.03
CAPN3-203ENST00000349748 MORN5Q5VZ52 161 aa8.61□□□□□ -1.03
CAPN3-203ENST00000349748 FAM159AQ6UWV7 190 aa8.61□□□□□ -1.03
CAPN3-203ENST00000349748 CARD19Q96LW7 228 aa8.61□□□□□ -1.03
CAPN3-203ENST00000349748 COL5A1P20908 1838 aaPredicted RBP8.61□□□□□ -1.03
CAPN3-203ENST00000349748 TRBV6-6A0A0A6YYG2 114 aa8.61□□□□□ -1.03
CAPN3-203ENST00000349748 DLL1O00548 723 aa8.61□□□□□ -1.03
CAPN3-203ENST00000349748 GFRA3O60609 400 aa8.61□□□□□ -1.03
CAPN3-203ENST00000349748 IFI27P40305 119 aaPredicted RBP8.61□□□□□ -1.03
CAPN3-203ENST00000349748 PRR20EP86478 221 aa8.61□□□□□ -1.03
CAPN3-203ENST00000349748 PRR20CP86479 221 aa8.61□□□□□ -1.03
CAPN3-203ENST00000349748 PRR20DP86480 221 aa8.61□□□□□ -1.03
CAPN3-203ENST00000349748 PRR20BP86481 221 aa8.61□□□□□ -1.03
CAPN3-203ENST00000349748 PRR20AP86496 221 aa8.61□□□□□ -1.03
CAPN3-203ENST00000349748 C12orf74Q32Q52 190 aa8.61□□□□□ -1.03
CAPN3-203ENST00000349748 LGALS9BQ3B8N2 356 aa8.61□□□□□ -1.03
CAPN3-203ENST00000349748 FAM27BQ5VT28 67 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms