RNA–Protein interactions for RNA: ENST00000349038.8

PTBP1-201, Transcript of polypyrimidine tract binding protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTBP1, Length 3,155 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-201ENST00000349038 PEX7O00628 323 aa12.34□□□□□ -0.43
PTBP1-201ENST00000349038 BMI1P35226 326 aa12.34□□□□□ -0.43
PTBP1-201ENST00000349038 VDAC2P45880 294 aaPredicted RBP12.34□□□□□ -0.43
PTBP1-201ENST00000349038 ZNF134P52741 427 aa12.34□□□□□ -0.43
PTBP1-201ENST00000349038 TMEM249Q2WGJ8 235 aa12.34□□□□□ -0.43
PTBP1-201ENST00000349038 CSMD1Q96PZ7 3565 aa12.34□□□□□ -0.43
PTBP1-201ENST00000349038 TIMM8AO60220 97 aaPredicted RBP12.34□□□□□ -0.43
PTBP1-201ENST00000349038 ZBTB34Q8NCN2 500 aa12.34□□□□□ -0.43
PTBP1-201ENST00000349038 LRRC29Q8WV35 223 aa12.34□□□□□ -0.43
PTBP1-201ENST00000349038 AP5S1Q9NUS5 200 aa12.34□□□□□ -0.43
PTBP1-201ENST00000349038 IDI2-AS1Q9NZ38 188 aa12.34□□□□□ -0.43
PTBP1-201ENST00000349038 KALRNO60229 2985 aa12.34□□□□□ -0.43
PTBP1-201ENST00000349038 TACC2O95359 2948 aa12.34□□□□□ -0.43
PTBP1-201ENST00000349038 K7ESF4 209 aa12.34□□□□□ -0.43
PTBP1-201ENST00000349038 MPV17P39210 176 aa12.34□□□□□ -0.43
PTBP1-201ENST00000349038 ERVK11-1P61568 191 aa12.34□□□□□ -0.43
PTBP1-201ENST00000349038 PPP1R32Q7Z5V6 425 aa12.34□□□□□ -0.43
PTBP1-201ENST00000349038 CIARTQ8N365 385 aaPredicted RBP12.34□□□□□ -0.43
PTBP1-201ENST00000349038 GRAMD2BQ96HH9 432 aa12.34□□□□□ -0.43
PTBP1-201ENST00000349038 LIPFP07098 398 aa12.33□□□□□ -0.44
PTBP1-201ENST00000349038 FCGR2BP31994 310 aaPredicted RBP12.33□□□□□ -0.44
PTBP1-201ENST00000349038 CKS1BP61024 79 aa12.33□□□□□ -0.44
PTBP1-201ENST00000349038 PEAR1Q5VY43 1037 aaPredicted RBP12.33□□□□□ -0.44
PTBP1-201ENST00000349038 ADTRPQ96IZ2 230 aa12.33□□□□□ -0.44
PTBP1-201ENST00000349038 DEFB127Q9H1M4 99 aa12.33□□□□□ -0.44
PTBP1-201ENST00000349038 NHP2Q9NX24 153 aaKnown RBP12.33□□□□□ -0.44
PTBP1-201ENST00000349038 A1L4Q6 167 aa12.33□□□□□ -0.44
PTBP1-201ENST00000349038 C9orf118A6NHY6 69 aa12.33□□□□□ -0.44
PTBP1-201ENST00000349038 LOXL1Q08397 574 aaPredicted RBP12.33□□□□□ -0.44
PTBP1-201ENST00000349038 C10orf55Q5SWW7 151 aa12.33□□□□□ -0.44
PTBP1-201ENST00000349038 C2orf91Q6ZV80 131 aa12.33□□□□□ -0.44
PTBP1-201ENST00000349038 PRNTQ86SH4 94 aa12.33□□□□□ -0.44
PTBP1-201ENST00000349038 NPIPB3Q92617 1050 aa12.33□□□□□ -0.44
PTBP1-201ENST00000349038 SPTA1P02549 2419 aa12.33□□□□□ -0.44
PTBP1-201ENST00000349038 hADV38S2A0JD32 116 aa12.32□□□□□ -0.44
PTBP1-201ENST00000349038 FAM120AOSQ5T036 256 aa12.32□□□□□ -0.44
PTBP1-201ENST00000349038 ADAMTSL5Q6ZMM2 481 aa12.32□□□□□ -0.44
PTBP1-201ENST00000349038 NEU4Q8WWR8 484 aaPredicted RBP12.32□□□□□ -0.44
PTBP1-201ENST00000349038 A0A1B0GV72 72 aa12.32□□□□□ -0.44
PTBP1-201ENST00000349038 K7EP34 96 aa12.32□□□□□ -0.44
PTBP1-201ENST00000349038 WFDC2Q14508 124 aa12.32□□□□□ -0.44
PTBP1-201ENST00000349038 C1orf229Q6ZS94 237 aaPredicted RBP12.32□□□□□ -0.44
PTBP1-201ENST00000349038 ARPC1AQ92747 370 aa12.32□□□□□ -0.44
PTBP1-201ENST00000349038 NPFFR1Q9GZQ6 430 aa12.32□□□□□ -0.44
PTBP1-201ENST00000349038 K7EQM0 130 aa12.32□□□□□ -0.44
PTBP1-201ENST00000349038 NDUFS8O00217 210 aa12.32□□□□□ -0.44
PTBP1-201ENST00000349038 CYB561P49447 251 aa12.32□□□□□ -0.44
PTBP1-201ENST00000349038 HSD52Q0P140 79 aa12.32□□□□□ -0.44
PTBP1-201ENST00000349038 SAMD5Q5TGI4 173 aa12.32□□□□□ -0.44
PTBP1-201ENST00000349038 SLC35E4Q6ICL7 350 aa12.32□□□□□ -0.44
PTBP1-201ENST00000349038 VSTM2AQ8TAG5 236 aa12.32□□□□□ -0.44
PTBP1-201ENST00000349038 C21orf140B9A014 251 aa12.31□□□□□ -0.44
PTBP1-201ENST00000349038 WISP2O76076 250 aa12.31□□□□□ -0.44
PTBP1-201ENST00000349038 SCGB2A2Q13296 93 aa12.31□□□□□ -0.44
PTBP1-201ENST00000349038 Q8IYB0 196 aa12.31□□□□□ -0.44
PTBP1-201ENST00000349038 GTSF1Q8WW33 167 aa12.31□□□□□ -0.44
PTBP1-201ENST00000349038 MBD6Q96DN6 1003 aa12.31□□□□□ -0.44
PTBP1-201ENST00000349038 SLC25A33Q9BSK2 321 aa12.31□□□□□ -0.44
PTBP1-201ENST00000349038 C19orf24Q9BVV8 132 aa12.31□□□□□ -0.44
PTBP1-201ENST00000349038 TEX50A0A1B0GTY4 177 aa12.31□□□□□ -0.44
PTBP1-201ENST00000349038 HSPE1P61604 102 aaKnown RBP12.31□□□□□ -0.44
PTBP1-201ENST00000349038 ZNF146Q15072 292 aa12.31□□□□□ -0.44
PTBP1-201ENST00000349038 FAM169BQ8N8A8 192 aa12.31□□□□□ -0.44
PTBP1-201ENST00000349038 CNEP1R1Q8N9A8 125 aa12.31□□□□□ -0.44
PTBP1-201ENST00000349038 B4GALT7Q9UBV7 327 aa12.31□□□□□ -0.44
PTBP1-201ENST00000349038 IGKV1-16P04430 117 aa12.3□□□□□ -0.44
PTBP1-201ENST00000349038 CFIP05156 583 aa12.3□□□□□ -0.44
PTBP1-201ENST00000349038 COX8AP10176 69 aa12.3□□□□□ -0.44
PTBP1-201ENST00000349038 TBC1D28Q2M2D7 210 aa12.3□□□□□ -0.44
PTBP1-201ENST00000349038 SRSF12Q8WXF0 261 aaKnown RBP12.3□□□□□ -0.44
PTBP1-201ENST00000349038 H1FXQ92522 213 aaKnown RBP12.3□□□□□ -0.44
PTBP1-201ENST00000349038 IGF2BP2-AS1Q96M15 143 aa12.3□□□□□ -0.44
PTBP1-201ENST00000349038 AGRNO00468 2067 aa12.3□□□□□ -0.44
PTBP1-201ENST00000349038 DLL1O00548 723 aa12.3□□□□□ -0.44
PTBP1-201ENST00000349038 NTN3O00634 580 aaPredicted RBP12.3□□□□□ -0.44
PTBP1-201ENST00000349038 IFI27P40305 119 aaPredicted RBP12.3□□□□□ -0.44
PTBP1-201ENST00000349038 PRB3Q04118 309 aaPredicted RBP12.3□□□□□ -0.44
PTBP1-201ENST00000349038 C10orf113Q5VZT2 155 aa12.3□□□□□ -0.44
PTBP1-201ENST00000349038 HCP5Q6MZN7 132 aa12.3□□□□□ -0.44
PTBP1-201ENST00000349038 PDPNQ86YL7 162 aa12.3□□□□□ -0.44
PTBP1-201ENST00000349038 SP1P08047 785 aa12.3□□□□□ -0.44
PTBP1-201ENST00000349038 PRR20EP86478 221 aa12.3□□□□□ -0.44
PTBP1-201ENST00000349038 PRR20CP86479 221 aa12.3□□□□□ -0.44
PTBP1-201ENST00000349038 PRR20DP86480 221 aa12.3□□□□□ -0.44
PTBP1-201ENST00000349038 PRR20BP86481 221 aa12.3□□□□□ -0.44
PTBP1-201ENST00000349038 PRR20AP86496 221 aa12.3□□□□□ -0.44
PTBP1-201ENST00000349038 OR2Z1Q8NG97 314 aa12.3□□□□□ -0.44
PTBP1-201ENST00000349038 CHODLQ9H9P2 273 aa12.3□□□□□ -0.44
PTBP1-201ENST00000349038 EP300Q09472 2414 aaPredicted RBP12.29□□□□□ -0.44
PTBP1-201ENST00000349038 SMKR1H3BMG3 65 aa12.29□□□□□ -0.44
PTBP1-201ENST00000349038 H3BMG7 143 aa12.29□□□□□ -0.44
PTBP1-201ENST00000349038 LINC00305Q7Z4B0 112 aa12.29□□□□□ -0.44
PTBP1-201ENST00000349038 BOKQ9UMX3 212 aaPredicted RBP12.29□□□□□ -0.44
PTBP1-201ENST00000349038 ZNF257Q9Y2Q1 563 aa12.29□□□□□ -0.44
PTBP1-201ENST00000349038 CFHR2P36980 270 aa12.29□□□□□ -0.44
PTBP1-201ENST00000349038 INSL3P51460 131 aa12.29□□□□□ -0.44
PTBP1-201ENST00000349038 CRYBA4P53673 196 aa12.29□□□□□ -0.44
PTBP1-201ENST00000349038 ANXA2RQ3ZCQ2 193 aa12.29□□□□□ -0.44
PTBP1-201ENST00000349038 WDR82Q6UXN9 313 aa12.29□□□□□ -0.44
PTBP1-201ENST00000349038 LY96Q9Y6Y9 160 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 104.8 ms