RNA–Protein interactions for RNA: ENST00000347635.8

NUP50-201, Transcript of nucleoporin 50, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP50, Length 5,233 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-201ENST00000347635 SRSF9Q13242 221 aaKnown RBP eCLIP12.04□□□□□ -0.48
NUP50-201ENST00000347635 C7orf71A4D174 169 aa12.03□□□□□ -0.48
NUP50-201ENST00000347635 FBLL1A6NHQ2 334 aaKnown RBP12.03□□□□□ -0.48
NUP50-201ENST00000347635 GAFA1Q96PS6 74 aa12.03□□□□□ -0.48
NUP50-201ENST00000347635 PYGO2Q9BRQ0 406 aa12.03□□□□□ -0.48
NUP50-201ENST00000347635 TMEM14BQ9NUH8 114 aa12.03□□□□□ -0.48
NUP50-201ENST00000347635 FBXL7Q9UJT9 491 aa12.03□□□□□ -0.48
NUP50-201ENST00000347635 ITGB1BP1O14713 200 aa12.03□□□□□ -0.48
NUP50-201ENST00000347635 RNASE2P10153 161 aaKnown RBP12.03□□□□□ -0.48
NUP50-201ENST00000347635 LCN12Q6JVE5 192 aa12.03□□□□□ -0.48
NUP50-201ENST00000347635 ID1P41134 155 aa12.03□□□□□ -0.48
NUP50-201ENST00000347635 ORMDL3Q8N138 153 aa12.03□□□□□ -0.48
NUP50-201ENST00000347635 S4R3C0 116 aa12.03□□□□□ -0.48
NUP50-201ENST00000347635 CEACAM4O75871 244 aa12.03□□□□□ -0.48
NUP50-201ENST00000347635 LHFPL4Q7Z7J7 247 aa12.03□□□□□ -0.48
NUP50-201ENST00000347635 ZNF329Q86UD4 541 aa12.03□□□□□ -0.48
NUP50-201ENST00000347635 METTL26Q96S19 204 aa12.03□□□□□ -0.48
NUP50-201ENST00000347635 SCRT1Q9BWW7 348 aa12.03□□□□□ -0.48
NUP50-201ENST00000347635 TMEM133Q9H2Q1 129 aa12.03□□□□□ -0.48
NUP50-201ENST00000347635 VWC2Q2TAL6 325 aa12.02□□□□□ -0.48
NUP50-201ENST00000347635 TMEM167AQ8TBQ9 72 aa12.02□□□□□ -0.48
NUP50-201ENST00000347635 H0YJW9 148 aa12.02□□□□□ -0.49
NUP50-201ENST00000347635 COA6Q5JTJ3 125 aaKnown RBP12.02□□□□□ -0.49
NUP50-201ENST00000347635 CGB1A6NKQ9 187 aa12.02□□□□□ -0.49
NUP50-201ENST00000347635 V9GYV3 84 aa12.02□□□□□ -0.49
NUP50-201ENST00000347635 RAB9AP51151 201 aa12.02□□□□□ -0.49
NUP50-201ENST00000347635 RPL15P61313 204 aaKnown RBP12.02□□□□□ -0.49
NUP50-201ENST00000347635 HIST1H1AQ02539 215 aaPredicted RBP12.02□□□□□ -0.49
NUP50-201ENST00000347635 SLC25A48Q6ZT89 311 aaKnown RBP12.02□□□□□ -0.49
NUP50-201ENST00000347635 OR5AN1Q8NGI8 311 aa12.02□□□□□ -0.49
NUP50-201ENST00000347635 TMEM131Q92545 1883 aa12.01□□□□□ -0.49
NUP50-201ENST00000347635 SMIM13P0DJ93 91 aa12.01□□□□□ -0.49
NUP50-201ENST00000347635 PPP1R27Q86WC6 154 aa12.01□□□□□ -0.49
NUP50-201ENST00000347635 ZCCHC24Q8N2G6 241 aaKnown RBP12.01□□□□□ -0.49
NUP50-201ENST00000347635 MUC21A0A0G2JKD1 596 aa12.01□□□□□ -0.49
NUP50-201ENST00000347635 MUC21A0A140T8X8 626 aa12.01□□□□□ -0.49
NUP50-201ENST00000347635 PRR31Q5SQ13 230 aa12.01□□□□□ -0.49
NUP50-201ENST00000347635 MUC21Q5SSG8 566 aa12.01□□□□□ -0.49
NUP50-201ENST00000347635 CRIP3Q6Q6R5 217 aa12.01□□□□□ -0.49
NUP50-201ENST00000347635 Q6ZR03 302 aa12.01□□□□□ -0.49
NUP50-201ENST00000347635 C18orf15Q96N68 181 aa12.01□□□□□ -0.49
NUP50-201ENST00000347635 IGKV1-16P04430 117 aa12.01□□□□□ -0.49
NUP50-201ENST00000347635 TSPOP30536 169 aa12.01□□□□□ -0.49
NUP50-201ENST00000347635 MLANAQ16655 118 aa12.01□□□□□ -0.49
NUP50-201ENST00000347635 ZNF672Q499Z4 452 aaPredicted RBP12.01□□□□□ -0.49
NUP50-201ENST00000347635 C16orf92Q96LL3 132 aa12.01□□□□□ -0.49
NUP50-201ENST00000347635 C15orf65H3BRN8 121 aa12.01□□□□□ -0.49
NUP50-201ENST00000347635 PF4V1P10720 104 aa12.01□□□□□ -0.49
NUP50-201ENST00000347635 LOXL3P58215 753 aa12.01□□□□□ -0.49
NUP50-201ENST00000347635 TMEM200BQ69YZ2 307 aa12.01□□□□□ -0.49
NUP50-201ENST00000347635 NEUROG1Q92886 237 aa12.01□□□□□ -0.49
NUP50-201ENST00000347635 TMEM249Q2WGJ8 235 aa12□□□□□ -0.49
NUP50-201ENST00000347635 PVRIGQ6DKI7 326 aa12□□□□□ -0.49
NUP50-201ENST00000347635 DYNLRB2Q8TF09 96 aa12□□□□□ -0.49
NUP50-201ENST00000347635 CEP250Q9BV73 2442 aa12□□□□□ -0.49
NUP50-201ENST00000347635 CIDEAO60543 219 aa12□□□□□ -0.49
NUP50-201ENST00000347635 HIST1H4GQ99525 98 aa12□□□□□ -0.49
NUP50-201ENST00000347635 PSG8Q9UQ74 426 aa12□□□□□ -0.49
NUP50-201ENST00000347635 TCRAP04437 139 aa12□□□□□ -0.49
NUP50-201ENST00000347635 C7orf69Q9H7B7 122 aa12□□□□□ -0.49
NUP50-201ENST00000347635 IGHV3-23P01764 117 aa12□□□□□ -0.49
NUP50-201ENST00000347635 FER1L6-AS1Q8NA97 138 aa12□□□□□ -0.49
NUP50-201ENST00000347635 LINC00479Q96M42 142 aa12□□□□□ -0.49
NUP50-201ENST00000347635 TRGV9Q99603 122 aa12□□□□□ -0.49
NUP50-201ENST00000347635 TRBV20OR9-2A0A075B6H5 130 aa11.99□□□□□ -0.49
NUP50-201ENST00000347635 MS4A6AQ9H2W1 248 aa11.99□□□□□ -0.49
NUP50-201ENST00000347635 TECTAO75443 2155 aa11.99□□□□□ -0.49
NUP50-201ENST00000347635 RNF125Q96EQ8 232 aa11.99□□□□□ -0.49
NUP50-201ENST00000347635 SMIM12Q96EX1 92 aa11.99□□□□□ -0.49
NUP50-201ENST00000347635 C11orf52Q96A22 123 aa11.99□□□□□ -0.49
NUP50-201ENST00000347635 TMEM178BH3BS89 294 aa11.99□□□□□ -0.49
NUP50-201ENST00000347635 ATP5G2Q06055 141 aa11.99□□□□□ -0.49
NUP50-201ENST00000347635 ORAOV1Q8WV07 137 aa11.99□□□□□ -0.49
NUP50-201ENST00000347635 C21orf62Q9NYP8 219 aa11.99□□□□□ -0.49
NUP50-201ENST00000347635 FAM106AQ4KMX7 169 aa11.98□□□□□ -0.49
NUP50-201ENST00000347635 OR10J6PQ8NGY7 276 aa11.98□□□□□ -0.49
NUP50-201ENST00000347635 SPRY4Q9C004 299 aa11.98□□□□□ -0.49
NUP50-201ENST00000347635 IGKV3-7A0A075B6H7 116 aa11.98□□□□□ -0.49
NUP50-201ENST00000347635 C18orf32Q8TCD1 76 aa11.98□□□□□ -0.49
NUP50-201ENST00000347635 TMEM238LA0A1B0GVL6 79 aa11.98□□□□□ -0.49
NUP50-201ENST00000347635 A6NJY4 79 aa11.98□□□□□ -0.49
NUP50-201ENST00000347635 PRB3Q04118 309 aaPredicted RBP11.98□□□□□ -0.49
NUP50-201ENST00000347635 PRSS8Q16651 343 aa11.98□□□□□ -0.49
NUP50-201ENST00000347635 EEF1AKMT3Q96AZ1 226 aa11.98□□□□□ -0.49
NUP50-201ENST00000347635 TGFAP01135 160 aa11.97□□□□□ -0.49
NUP50-201ENST00000347635 TEX43Q6ZNM6 134 aa11.97□□□□□ -0.49
NUP50-201ENST00000347635 IGHV3-35A0A0C4DH35 117 aa11.97□□□□□ -0.49
NUP50-201ENST00000347635 DLX6P56179 175 aa11.97□□□□□ -0.49
NUP50-201ENST00000347635 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.97□□□□□ -0.49
NUP50-201ENST00000347635 MRPS16Q9Y3D3 137 aaKnown RBP11.97□□□□□ -0.49
NUP50-201ENST00000347635 GGTLC3B5MD39 225 aa11.97□□□□□ -0.49
NUP50-201ENST00000347635 SYS1-DBNDD2H3BUS1 97 aa11.97□□□□□ -0.49
NUP50-201ENST00000347635 K7EN84 100 aa11.97□□□□□ -0.49
NUP50-201ENST00000347635 PSMB2P49721 201 aa11.97□□□□□ -0.49
NUP50-201ENST00000347635 ARPC1AQ92747 370 aa11.97□□□□□ -0.49
NUP50-201ENST00000347635 SLC25A2Q9BXI2 301 aa11.97□□□□□ -0.49
NUP50-201ENST00000347635 CACNA1DQ01668 2161 aa11.97□□□□□ -0.49
NUP50-201ENST00000347635 SMIM27A0A1W2PRY6 76 aa11.97□□□□□ -0.49
NUP50-201ENST00000347635 hDV102S1A0JD36 115 aa11.97□□□□□ -0.49
NUP50-201ENST00000347635 NBR2O15453 112 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms